Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G47800 Arabidopsis lyrata HOM05D003132 ORTHO05D038701 5.0e-31 137.1 68 100.0
CARHR032860 Cardamine hirsuta HOM05D003132 ORTHO05D038701 3.7e-10 67.8 43 76.7
TWI12G0091 Tripterygium wilfordii HOM05D003132 ORTHO05D003736 2.4e-09 65.1 68 52.9
Atru.chr13.2600 Acer truncatum HOM05D003132 ORTHO05D003736 7.0e-09 63.5 46 60.9
Haze_14017 Corylus avellana HOM05D003132 ORTHO05D003736 2.7e-08 61.6 46 63.0
FvH4_2g00230 Fragaria vesca HOM05D003132 ORTHO05D003736 2.7e-08 61.6 46 60.9
FAN19G2774 Fragaria x ananassa HOM05D003132 ORTHO05D003736 2.7e-08 61.6 46 60.9
FAN24G0668 Fragaria x ananassa HOM05D003132 ORTHO05D003736 2.7e-08 61.6 46 60.9
RcHm_v2.0_Chr6g0249521 Rosa chinensis HOM05D003132 ORTHO05D003736 2.7e-08 61.6 46 60.9
Eucgr.F04096 Eucalyptus grandis HOM05D003132 ORTHO05D003736 3.5e-08 61.2 46 60.9
MD10G1001000 Malus domestica HOM05D003132 ORTHO05D003736 3.5e-08 61.2 46 60.9
Prupe.8G002200 Prunus persica HOM05D003132 ORTHO05D003736 4.5e-08 60.8 46 58.7
TAR628G0652 Trochodendron aralioides HOM05D003132 ORTHO05D003736 4.5e-08 60.8 46 60.9
Zm00001eb064020 Zea mays HOM05D003132 ORTHO05D003736 7.7e-08 60.1 44 63.6
GSVIVG01037118001 Vitis vinifera HOM05D003132 ORTHO05D003736 1.0e-07 59.7 46 58.7
Cfa021494 Carpinus fangiana HOM05D003132 ORTHO05D003736 1.3e-07 59.3 46 60.9
Cpa.g.sc249.17 Carica papaya HOM05D003132 ORTHO05D003736 1.7e-07 58.9 44 59.1
Duzib177G0974 Durio zibethinus HOM05D003132 ORTHO05D003736 1.7e-07 58.9 46 58.7
PGR102G0292 Punica granatum HOM05D003132 ORTHO05D003736 2.3e-07 58.5 46 58.7
Manes.18G119900 Manihot esculenta HOM05D003132 ORTHO05D003736 3.8e-07 57.8 46 60.9
QL09p001110 Quercus lobata HOM05D003132 ORTHO05D003736 3.8e-07 57.8 46 58.7
arahy.Tifrunner.gnm1.ann1.F59MVU Arachis hypogaea HOM05D003132 ORTHO05D003736 6.6e-07 57.0 46 58.7
arahy.Tifrunner.gnm1.ann1.M3HMN7 Arachis hypogaea HOM05D003132 ORTHO05D003736 6.6e-07 57.0 46 58.7
CiPaw.03G011700 Carya illinoinensis HOM05D003132 ORTHO05D003736 6.6e-07 57.0 46 56.5
Thecc.08G166600 Theobroma cacao HOM05D003132 ORTHO05D003736 1.1e-06 56.2 46 56.5
Ciclev10020271m.g Citrus clementina HOM05D003132 ORTHO05D003736 1.5e-06 55.8 46 54.3
Nn5g27185 Nelumbo nucifera HOM05D003132 ORTHO05D003736 2.5e-06 55.1 46 52.2
Potri.019G066200 Populus trichocarpa HOM05D003132 ORTHO05D003736 3.3e-06 54.7 46 54.3
vmacro00917 Vaccinium macrocarpon HOM05D003132 ORTHO05D003736 4.2e-06 54.3 46 58.7
MBI03_g39997_MAGBIO Magnolia biondii HOM05D003132 ORTHO05D003736 5.5e-06 53.9 44 59.1
Sabra19G0078500 Salix brachista HOM05D003132 ORTHO05D003736 5.5e-06 53.9 46 54.3
Actinidia01536 Actinidia chinensis HOM05D003132 ORTHO05D003736 7.2e-06 53.5 46 56.5
BcaB08g37217 Brassica carinata HOM05D003132 ORTHO05D003736 7.2e-06 53.5 87 35.6
Thhalv10012815m.g Eutrema salsugineum HOM05D003132 ORTHO05D003736 7.2e-06 53.5 46 54.3
Gohir.A08G230900 Gossypium hirsutum HOM05D003132 ORTHO05D003736 7.2e-06 53.5 46 56.5
CDE04G2334 Ceratophyllum demersum HOM05D003132 ORTHO05D003736 9.5e-06 53.1 46 50.0
Rhsim12G0001000 Rhododendron simsii HOM05D003132 ORTHO05D003736 9.5e-06 53.1 46 56.5
Zm00001eb090720 Zea mays HOM05D003132 ORTHO05D003736 9.5e-06 53.1 44 61.4


User provided reference genes

Program Settings