Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G47660 Arabidopsis lyrata HOM05D008080 ORTHO05D010244 2.5e-90 335.5 178 100.0
AT1G33265 Arabidopsis thaliana HOM05D008080 ORTHO05D010244 3.5e-84 315.1 178 93.8
Carub.0001s3146 Capsella rubella HOM05D008080 ORTHO05D010244 2.6e-79 298.9 178 88.8
Thhalv10008894m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 5.4e-77 291.2 178 86.0
Sp1g28720 Schrenkiella parvula HOM05D008080 ORTHO05D010244 1.2e-76 290.0 179 86.0
CARHR032630 Cardamine hirsuta HOM05D008080 ORTHO05D010244 1.0e-75 287.0 178 84.3
C06p12680 Brassica napus HOM05D008080 ORTHO05D010244 4.0e-72 275.0 180 85.0
BraA09t38837Z Brassica rapa HOM05D008080 ORTHO05D010244 8.9e-72 273.9 180 85.0
A09p32970 Brassica napus HOM05D008080 ORTHO05D010244 4.4e-71 271.6 180 84.4
BcaC08g43879 Brassica carinata HOM05D008080 ORTHO05D010244 5.8e-71 271.2 180 85.0
BolC6t36418H Brassica oleracea HOM05D008080 ORTHO05D010244 5.8e-71 271.2 180 85.0
BcaB07g32963 Brassica carinata HOM05D008080 ORTHO05D010244 1.2e-68 263.5 184 80.4
Thhalv10008954m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 1.2e-63 246.9 164 80.5
Aa31LG6G7790 Aethionema arabicum HOM05D008080 ORTHO05D010244 1.7e-59 233.0 176 72.7
THA.LOC104806472 Tarenaya hassleriana HOM05D008080 ORTHO05D010244 1.1e-56 223.8 166 73.5
Potri.001G454900 Populus trichocarpa HOM05D008080 ORTHO05D010244 5.5e-37 158.3 120 63.3
CiPaw.11G105600 Carya illinoinensis HOM05D008080 ORTHO05D010244 2.7e-36 156.0 124 61.3
Gohir.A03G078700 Gossypium hirsutum HOM05D008080 ORTHO05D010244 1.0e-35 154.1 122 63.9
Potri.011G147000 Populus trichocarpa HOM05D008080 ORTHO05D010244 1.0e-35 154.1 135 58.5
Gohir.D03G089300 Gossypium hirsutum HOM05D008080 ORTHO05D010244 3.0e-35 152.5 114 65.8
QL02p026515 Quercus lobata HOM05D008080 ORTHO05D010244 6.7e-35 151.4 138 55.8
Duzib205G0863 Durio zibethinus HOM05D008080 ORTHO05D010244 1.1e-34 150.6 132 59.1
Prupe.5G137900 Prunus persica HOM05D008080 ORTHO05D010244 4.3e-34 148.7 139 54.0
Thecc.03G213000 Theobroma cacao HOM05D008080 ORTHO05D010244 7.4e-34 147.9 146 54.8
Aqoxy5G03619 Aquilegia oxysepala HOM05D008080 ORTHO05D010244 4.8e-33 145.2 163 54.0
Os04g0577800 Oryza sativa ssp. japonica HOM05D008080 ORTHO05D010244 4.8e-33 145.2 128 59.4
MD06G1128100 Malus domestica HOM05D008080 ORTHO05D010244 1.1e-32 144.1 117 57.3
CDE09G0306 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 1.4e-32 143.7 158 50.6
FvH4_5g10080 Fragaria vesca HOM05D008080 ORTHO05D010244 2.4e-32 142.9 137 53.3
FAN18G1060 Fragaria x ananassa HOM05D008080 ORTHO05D010244 2.4e-32 142.9 137 53.3
CDE11G0346 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 4.1e-32 142.1 156 51.3
GSVIVG01019727001 Vitis vinifera HOM05D008080 ORTHO05D006305 5.3e-32 141.7 123 60.2
FAN08G1106 Fragaria x ananassa HOM05D008080 ORTHO05D010244 9.0e-32 141.0 137 52.6
MBI04_g15074_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 9.0e-32 141.0 112 59.8
RcHm_v2.0_Chr7g0188191 Rosa chinensis HOM05D008080 ORTHO05D010244 1.2e-31 140.6 115 58.3
TWI81G0982 Tripterygium wilfordii HOM05D008080 ORTHO05D010244 2.6e-31 139.4 125 60.0
Zm00001eb073300 Zea mays HOM05D008080 ORTHO05D010244 3.4e-31 139.0 110 61.8
CANSAT21G2269 Cannabis sativa HOM05D008080 ORTHO05D010244 3.8e-30 135.6 114 59.6
ECA246G2048 Erigeron canadensis HOM05D008080 ORTHO05D010244 5.0e-30 135.2 114 58.8
PGR031G3362 Punica granatum HOM05D008080 ORTHO05D010244 5.0e-30 135.2 182 45.1
Lsat_1_v5_gn_3_13260 Lactuca sativa HOM05D008080 ORTHO05D010244 8.5e-30 134.4 115 58.3
HanXRQChr17g0534021 Helianthus annuus HOM05D008080 ORTHO05D010244 1.4e-29 133.7 115 58.3
DCAR_028394 Daucus carota HOM05D008080 ORTHO05D010244 3.2e-29 132.5 109 60.6
Actinidia22242 Actinidia chinensis HOM05D008080 ORTHO05D010244 1.2e-28 130.6 108 59.3
CSS0035203 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.6e-28 130.2 126 55.6
Lj2A146T28 Lonicera japonica HOM05D008080 ORTHO05D010244 1.8e-27 126.7 136 49.3
FAN04G0887 Fragaria x ananassa HOM05D008080 ORTHO05D010244 3.9e-27 125.6 143 48.3
HPP92_014501 Vanilla planifolia HOM05D008080 ORTHO05D010244 3.9e-27 125.6 162 46.9
Nn5g27399 Nelumbo nucifera HOM05D008080 ORTHO05D010244 8.8e-27 124.4 94 64.9
CSS0020797 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 3.3e-26 122.5 117 57.3
CSS0025371 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 3.3e-26 122.5 117 57.3
CSS0037763 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 3.3e-26 122.5 117 57.3
CSS0040065 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 3.3e-26 122.5 117 57.3
SMO114G0056 Selaginella moellendorffii HOM05D008080 ORTHO05D010244 4.3e-26 122.1 118 52.5
CSS0004858 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 5.7e-26 121.7 117 56.4
CSS0001168 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 7.4e-26 121.3 117 57.3
Gorai.003G072100 Gossypium raimondii HOM05D008080 ORTHO05D010244 2.2e-25 119.8 90 66.7
Pp3c4_29930 Physcomitrium patens HOM05D008080 ORTHO05D010244 8.2e-25 117.9 114 49.1
Pp3c4_29940 Physcomitrium patens HOM05D008080 ORTHO05D010244 8.2e-25 117.9 114 49.1
CSS0032680 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.8e-24 116.7 117 54.7
COL.COLO4_20927 Corchorus olitorius HOM05D008080 ORTHO05D010244 4.1e-24 115.5 90 62.2
ATR0620G064 Amborella trichopoda HOM05D008080 ORTHO05D010244 3.4e-23 112.5 90 62.2
Sabra16G0307700 Salix brachista HOM05D008080 ORTHO05D010244 4.5e-23 112.1 221 33.9
CSS0010108 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.1e-20 103.2 117 53.0
CSS0042852 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.1e-20 103.2 117 53.0
Rhsim02G0256000 Rhododendron simsii HOM05D008080 ORTHO05D010244 4.4e-18 95.5 225 33.3
Cpa.g.sc37.123 Carica papaya HOM05D008080 ORTHO05D010244 1.4e-13 80.5 63 63.5
Dinv03669 Davidia involucrata HOM05D008080 ORTHO05D010244 4.2e-13 79.0 65 56.9
Sabra11G0132200 Salix brachista HOM05D008080 ORTHO05D010244 6.1e-12 75.1 135 40.0
MBI04_g47856_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 1.0e-11 74.3 59 59.3
Eucgr.D02545 Eucalyptus grandis HOM05D008080 ORTHO05D010244 6.7e-11 71.6 86 48.8


User provided reference genes

Program Settings