Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G46850 Arabidopsis lyrata HOM05D013487 ORTHO05D015348 5.6e-124 447.6 220 100.0
AT1G32585 Arabidopsis thaliana HOM05D013487 ORTHO05D015348 4.4e-97 358.2 223 84.8
Thhalv10009422m.g Eutrema salsugineum HOM05D013487 ORTHO05D015348 5.1e-61 238.4 215 60.9
Sp1g28320 Schrenkiella parvula HOM05D013487 ORTHO05D015348 3.3e-60 235.7 214 62.1
CARHR032050 Cardamine hirsuta HOM05D013487 ORTHO05D015348 3.5e-49 199.1 181 61.9
BcaB04g17956 Brassica carinata HOM05D013487 ORTHO05D015348 1.5e-47 193.7 215 56.3
BraA08t32908Z Brassica rapa HOM05D013487 ORTHO05D015348 2.5e-47 193.0 236 51.7
A08p09060 Brassica napus HOM05D013487 ORTHO05D015348 5.5e-47 191.8 231 51.9
Carub.0001s3099 Capsella rubella HOM05D013487 ORTHO05D015348 5.5e-47 191.8 219 59.8
BolC8t47942H Brassica oleracea HOM05D013487 ORTHO05D015348 2.3e-45 186.4 233 50.6
BcaC07g37591 Brassica carinata HOM05D013487 ORTHO05D015348 5.2e-45 185.3 233 50.2
CARHR032040 Cardamine hirsuta HOM05D013487 ORTHO05D015348 2.8e-35 152.9 144 56.9
AT1G32610 Arabidopsis thaliana HOM05D002068 ORTHO05D002029 1.7e-11 73.9 264 31.1
THA.LOC104814442 Tarenaya hassleriana HOM05D002068 ORTHO05D002029 6.4e-11 72.0 331 30.8
TWI81G0802 Tripterygium wilfordii HOM05D002068 ORTHO05D002029 5.4e-10 68.9 305 30.5
BcaC02g07727 Brassica carinata HOM05D002068 ORTHO05D002029 1.6e-09 67.4 308 28.9
BcaB06g28833 Brassica carinata HOM05D002068 ORTHO05D002029 4.6e-09 65.9 189 32.8
AL1G46870 Arabidopsis lyrata HOM05D002068 ORTHO05D002029 6.0e-09 65.5 270 32.2
Ca_06078_v3 Cicer arietinum L. HOM05D002068 ORTHO05D002029 6.0e-09 65.5 277 29.6
Hma1.2p1_0303F.1_g119120 Hydrangea macrophylla HOM05D002068 ORTHO05D002029 1.0e-08 64.7 259 28.6
THA.LOC104807950 Tarenaya hassleriana HOM05D002068 ORTHO05D002029 1.0e-08 64.7 318 28.6
Actinidia03376 Actinidia chinensis HOM05D002068 ORTHO05D002029 1.7e-08 63.9 277 27.4
BolC4t27901H Brassica oleracea HOM05D002068 ORTHO05D002029 1.7e-08 63.9 305 28.5
Phvul.002G141800 Phaseolus vulgaris HOM05D002068 ORTHO05D002029 1.7e-08 63.9 273 29.7
C04p64180 Brassica napus HOM05D002068 ORTHO05D002029 6.6e-08 62.0 307 27.0
Eucgr.D02200 Eucalyptus grandis HOM05D002068 ORTHO05D002029 6.6e-08 62.0 249 31.3
Psat2g136560 Pisum sativum HOM05D002068 ORTHO05D002029 1.1e-07 61.2 273 29.3
Cfa012439 Carpinus fangiana HOM05D002068 ORTHO05D002029 1.5e-07 60.8 281 29.2
TAR375G0554 Trochodendron aralioides HOM05D002068 ORTHO05D002029 1.5e-07 60.8 222 29.3
Aa31LG2G13360 Aethionema arabicum HOM05D002068 ORTHO05D002029 1.9e-07 60.5 239 32.2
Lalb_Chr05g0216091 Lupinus albus HOM05D002068 ORTHO05D002029 1.9e-07 60.5 233 30.5
Phvul.003G285600 Phaseolus vulgaris HOM05D002068 ORTHO05D002029 1.9e-07 60.5 210 32.9
vmacro00330 Vaccinium macrocarpon HOM05D002068 ORTHO05D002029 2.5e-07 60.1 240 29.2
CARHR129400 Cardamine hirsuta HOM05D002068 ORTHO05D002029 4.3e-07 59.3 273 27.8
Dinv25215 Davidia involucrata HOM05D002068 ORTHO05D002029 4.3e-07 59.3 281 28.8
Sp4g17450 Schrenkiella parvula HOM05D002068 ORTHO05D002029 5.6e-07 58.9 354 27.4
Lj2g0016669 Lotus japonicus HOM05D002068 ORTHO05D002029 7.3e-07 58.5 283 26.5
Haze_08229 Corylus avellana HOM05D002068 ORTHO05D002029 9.5e-07 58.2 256 29.3
ECA233G6139 Erigeron canadensis HOM05D002068 ORTHO05D002029 9.5e-07 58.2 249 30.5
Atru.chr6.1710 Acer truncatum HOM05D002068 ORTHO05D002029 1.6e-06 57.4 306 28.4
BraA04t18182Z Brassica rapa HOM05D002068 ORTHO05D002029 1.6e-06 57.4 307 26.4
CSS0037727 Camellia sinensis var. sinensis HOM05D002068 ORTHO05D002029 1.6e-06 57.4 253 28.5
CSS0039799 Camellia sinensis var. sinensis HOM05D002068 ORTHO05D002029 1.6e-06 57.4 253 28.5
CiPaw.12G063800 Carya illinoinensis HOM05D002068 ORTHO05D002029 1.6e-06 57.4 210 31.9
CsaV3_3G001730 Cucumis sativus L. HOM05D002068 ORTHO05D002029 1.6e-06 57.4 300 27.7
CsaV3_3G049180 Cucumis sativus L. HOM05D002068 ORTHO05D002029 1.6e-06 57.4 285 28.1
Carub.0004s1693 Capsella rubella HOM05D002068 ORTHO05D002029 2.1e-06 57.0 170 35.9
TPR.G1043 Trifolium pratense HOM05D002068 ORTHO05D002029 2.8e-06 56.6 198 31.8
CANSAT21G2072 Cannabis sativa HOM05D002068 ORTHO05D002029 3.6e-06 56.2 111 41.4
MELO3C003409.2 Cucumis melo HOM05D002068 ORTHO05D002029 4.7e-06 55.8 282 28.7
Dinv28957 Davidia involucrata HOM05D002068 ORTHO05D002029 4.7e-06 55.8 270 28.5
A04p26780 Brassica napus HOM05D002068 ORTHO05D002029 6.2e-06 55.5 192 30.7
Thhalv10016759m.g Eutrema salsugineum HOM05D002068 ORTHO05D002029 6.2e-06 55.5 355 26.2


User provided reference genes

Program Settings