Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G45960 Arabidopsis lyrata HOM05D004185 ORTHO05D005294 4.6e-155 551.2 282 100.0
AT1G31860 Arabidopsis thaliana HOM05D004185 ORTHO05D005294 2.2e-149 532.3 282 96.8
CARHR031200 Cardamine hirsuta HOM05D004185 ORTHO05D005294 1.6e-144 516.2 283 93.3
Thhalv10008417m.g Eutrema salsugineum HOM05D004185 ORTHO05D005294 1.3e-141 506.5 283 92.6
Sp1g27580 Schrenkiella parvula HOM05D004185 ORTHO05D005294 3.3e-137 491.9 283 89.8
Aa31LG2G14180 Aethionema arabicum HOM05D004185 ORTHO05D005294 4.3e-137 491.5 283 89.8
BcaB03g13785 Brassica carinata HOM05D004185 ORTHO05D005294 1.5e-134 483.0 282 88.3
BcaC05g27950 Brassica carinata HOM05D004185 ORTHO05D005294 1.4e-132 476.5 283 87.6
C05p39540 Brassica napus HOM05D004185 ORTHO05D005294 1.4e-132 476.5 283 87.6
BolC5t32695H Brassica oleracea HOM05D004185 ORTHO05D005294 1.4e-132 476.5 283 87.6
BcaB07g32843 Brassica carinata HOM05D004185 ORTHO05D005294 1.2e-131 473.4 283 87.3
A09p34390 Brassica napus HOM05D004185 ORTHO05D005294 1.2e-131 473.4 283 84.8
BraA09t38984Z Brassica rapa HOM05D004185 ORTHO05D005294 1.2e-131 473.4 283 84.8
A05p25460 Brassica napus HOM05D004185 ORTHO05D005294 5.1e-130 468.0 284 86.3
BraA05t21430Z Brassica rapa HOM05D004185 ORTHO05D005294 8.7e-130 467.2 286 86.7
THA.LOC104812726 Tarenaya hassleriana HOM05D004185 ORTHO05D005294 2.2e-125 452.6 282 81.6
BcaC05g27215 Brassica carinata HOM05D004185 ORTHO05D005294 2.1e-123 446.0 289 80.3
BolC5t31845H Brassica oleracea HOM05D004185 ORTHO05D005294 2.1e-123 446.0 289 80.3
Carub.0001s3019 Capsella rubella HOM05D004185 ORTHO05D005294 2.6e-105 386.0 202 97.0
Atru.chr3.2840 Acer truncatum HOM05D004185 ORTHO05D005294 1.5e-102 376.7 283 69.3
Prupe.6G095300 Prunus persica HOM05D004185 ORTHO05D005294 3.5e-102 375.6 285 68.1
Manes.11G075000 Manihot esculenta HOM05D004185 ORTHO05D005294 7.7e-102 374.4 284 67.6
C05p31190 Brassica napus HOM05D004185 ORTHO05D005294 3.8e-101 372.1 284 70.1
Migut.D01934 Erythranthe guttata HOM05D004185 ORTHO05D005294 6.5e-101 371.3 268 72.0
arahy.Tifrunner.gnm1.ann1.J4TN1Z Arachis hypogaea HOM05D004185 ORTHO05D005294 1.5e-100 370.2 281 69.8
arahy.Tifrunner.gnm1.ann1.DC6XCB Arachis hypogaea HOM05D004185 ORTHO05D005294 1.9e-100 369.8 281 69.8
Ciclev10005565m.g Citrus clementina HOM05D004185 ORTHO05D005294 2.5e-100 369.4 281 70.5
HanXRQChr03g0070171 Helianthus annuus HOM05D004185 ORTHO05D005294 3.2e-100 369.0 261 70.1
GSVIVG01032967001 Vitis vinifera HOM05D004185 ORTHO05D005294 3.2e-100 369.0 285 68.8
Potri.001G391400 Populus trichocarpa HOM05D004185 ORTHO05D005294 5.5e-100 368.2 253 73.5
PGR142G0491 Punica granatum HOM05D004185 ORTHO05D005294 7.2e-100 367.9 259 73.0
PGSC0003DMG402004569 Solanum tuberosum HOM05D004185 ORTHO05D005294 7.2e-100 367.9 277 69.3
Eucgr.F01985 Eucalyptus grandis HOM05D004185 ORTHO05D005294 9.4e-100 367.5 256 71.9
RcHm_v2.0_Chr7g0223141 Rosa chinensis HOM05D004185 ORTHO05D005294 1.2e-99 367.1 252 73.0
CANSAT80G1231 Cannabis sativa HOM05D004185 ORTHO05D005294 1.6e-99 366.7 281 71.2
Thecc.04G049500 Theobroma cacao HOM05D004185 ORTHO05D005294 1.6e-99 366.7 268 70.1
Sabra16G0256800 Salix brachista HOM05D004185 ORTHO05D005294 2.1e-99 366.3 272 68.0
CAN.G767.4 Capsicum annuum HOM05D004185 ORTHO05D005294 4.7e-99 365.2 236 76.7
Lj1g0009190 Lotus japonicus HOM05D004185 ORTHO05D005294 2.3e-98 362.8 280 68.6
Psat3g092000 Pisum sativum HOM05D004185 ORTHO05D005294 2.3e-98 362.8 230 77.8
FAN05G5133 Fragaria x ananassa HOM05D004185 ORTHO05D005294 3.0e-98 362.5 250 72.8
MD11G1131000 Malus domestica HOM05D004185 ORTHO05D005294 3.0e-98 362.5 233 75.1
TPR.G26467 Trifolium pratense HOM05D004185 ORTHO05D005294 5.2e-98 361.7 246 74.0
Oeu023432.1 Olea europaea HOM05D004185 ORTHO05D005294 8.8e-98 360.9 242 75.6
Ca_08226_v3 Cicer arietinum L. HOM05D004185 ORTHO05D005294 1.1e-97 360.5 287 67.9
Duzib084G1135 Durio zibethinus HOM05D004185 ORTHO05D005294 1.1e-97 360.5 284 67.3
FvH4_3g33130 Fragaria vesca HOM05D004185 ORTHO05D005294 2.0e-97 359.8 252 73.0
FAN14G0322 Fragaria x ananassa HOM05D004185 ORTHO05D005294 2.0e-97 359.8 257 71.2
Rhsim01G0198500 Rhododendron simsii HOM05D004185 ORTHO05D005294 2.0e-97 359.8 238 76.1
Solyc10g005930.2 Solanum lycopersicum HOM05D004185 ORTHO05D005294 2.0e-97 359.8 277 67.1
Sopen10g001890 Solanum pennellii HOM05D004185 ORTHO05D005294 2.0e-97 359.8 277 67.9
HanXRQChr05g0146191 Helianthus annuus HOM05D004185 ORTHO05D005294 2.6e-97 359.4 275 66.5
FAN21G3167 Fragaria x ananassa HOM05D004185 ORTHO05D005294 3.3e-97 359.0 252 73.0
Lsat_1_v5_gn_9_110520 Lactuca sativa HOM05D004185 ORTHO05D005294 4.4e-97 358.6 274 67.9
Hma1.2p1_0565F.1_g179520 Hydrangea macrophylla HOM05D004185 ORTHO05D005294 7.4e-97 357.8 283 67.5
vmacro18393 Vaccinium macrocarpon HOM05D004185 ORTHO05D005294 7.4e-97 357.8 233 77.7
VMungo0464G1671 Vigna mungo HOM05D004185 ORTHO05D005294 9.7e-97 357.5 257 72.4
ECA232G0163 Erigeron canadensis HOM05D004185 ORTHO05D005294 1.7e-96 356.7 282 64.9
Lj1A1083G27 Lonicera japonica HOM05D004185 ORTHO05D005294 1.7e-96 356.7 284 65.1
Lalb_Chr02g0153581 Lupinus albus HOM05D004185 ORTHO05D005294 1.7e-96 356.7 279 65.9
Lj2g0021694 Lotus japonicus HOM05D004185 ORTHO05D005294 2.8e-96 355.9 229 76.9
TWI63G0858 Tripterygium wilfordii HOM05D004185 ORTHO05D005294 2.8e-96 355.9 248 73.0
Haze_14968 Corylus avellana HOM05D004185 ORTHO05D005294 3.7e-96 355.5 287 65.5
Glyma.16G046900 Glycine max HOM05D004185 ORTHO05D005294 3.7e-96 355.5 279 69.2
Cfa007152 Carpinus fangiana HOM05D004185 ORTHO05D005294 4.8e-96 355.1 284 65.8
SGA_v2.0_scaffold114G31833 Striga asiatica HOM05D004185 ORTHO05D005294 6.3e-96 354.8 276 68.8
Gohir.A09G051200 Gossypium hirsutum HOM05D004185 ORTHO05D005294 8.2e-96 354.4 268 68.7
Rhsim08G0038300 Rhododendron simsii HOM05D004185 ORTHO05D005294 8.2e-96 354.4 238 75.2
Medtr7g084480 Medicago truncatula HOM05D004185 ORTHO05D005294 1.1e-95 354.0 229 76.9
PSO017G0731 Papaver somniferum HOM05D004185 ORTHO05D005294 1.1e-95 354.0 299 63.5
QL08p064476 Quercus lobata HOM05D004185 ORTHO05D005294 1.4e-95 353.6 306 63.4
Gorai.002G196300 Gossypium raimondii HOM05D004185 ORTHO05D005294 1.8e-95 353.2 268 67.9
MD03G1104500 Malus domestica HOM05D004185 ORTHO05D005294 1.8e-95 353.2 228 75.0
FAN16G0073 Fragaria x ananassa HOM05D004185 ORTHO05D005294 2.4e-95 352.8 257 71.6
Gohir.D01G158300 Gossypium hirsutum HOM05D004185 ORTHO05D005294 3.1e-95 352.4 268 67.5
Actinidia37713 Actinidia chinensis HOM05D004185 ORTHO05D005294 7.0e-95 351.3 237 73.8
Sc07g0003880 Simmondsia chinensis HOM05D004185 ORTHO05D005294 1.2e-94 350.5 283 66.1
PSO478G4545 Papaver somniferum HOM05D004185 ORTHO05D005294 1.6e-94 350.1 241 73.9
TAR374G1058 Trochodendron aralioides HOM05D004185 ORTHO05D005294 2.6e-94 349.4 271 66.4
MBI07_g13955_MAGBIO Magnolia biondii HOM05D004185 ORTHO05D005294 7.7e-94 347.8 284 66.5
COL.COLO4_05853 Corchorus olitorius HOM05D004546 ORTHO05D005294 1.0e-93 347.4 255 69.8
CiPaw.07G054200 Carya illinoinensis HOM05D004185 ORTHO05D005294 1.7e-93 346.7 251 70.9
Atru.chr11.1029 Acer truncatum HOM05D004185 ORTHO05D005294 2.9e-93 345.9 261 68.6
ATR0602G180 Amborella trichopoda HOM05D004185 ORTHO05D005294 5.0e-93 345.1 230 74.8
Cpa.g.sc139.45 Carica papaya HOM05D004185 ORTHO05D005294 5.0e-93 345.1 255 69.0
DCAR_009570 Daucus carota HOM05D004185 ORTHO05D005294 5.0e-93 345.1 236 72.9
Actinidia19546 Actinidia chinensis HOM05D004185 ORTHO05D005294 6.5e-93 344.7 253 68.8
MSTRG.11461 Avicennia marina HOM05D004185 ORTHO05D005294 8.5e-93 344.4 221 78.7
SalBow2G1694 Salvia bowleyana HOM05D004185 ORTHO05D005294 2.5e-92 342.8 221 76.5
TAR622G0010 Trochodendron aralioides HOM05D004185 ORTHO05D005294 4.2e-92 342.0 228 74.1
AUR62008433 Chenopodium quinoa HOM05D004185 ORTHO05D005294 2.1e-91 339.7 251 68.1
AUR62021660 Chenopodium quinoa HOM05D004185 ORTHO05D005294 2.1e-91 339.7 251 67.7
Aqoxy6G01376 Aquilegia oxysepala HOM05D004185 ORTHO05D005294 2.7e-91 339.3 251 67.3
Peaxi162Scf00060g00441 Petunia axillaris HOM05D004185 ORTHO05D005294 4.7e-91 338.6 267 67.4
EL10Ac5g11038 Beta vulgaris HOM05D004185 ORTHO05D005294 1.8e-90 336.7 282 62.1
unitig_0.g1440 Utricularia gibba HOM05D004185 ORTHO05D005294 1.8e-90 336.7 232 75.0
Os01g0276500 Oryza sativa ssp. japonica HOM05D004185 ORTHO05D005294 1.5e-89 333.6 236 69.1
Zm00001eb332710 Zea mays HOM05D004185 ORTHO05D005294 1.5e-89 333.6 236 69.9
FAN25G2535 Fragaria x ananassa HOM05D004185 ORTHO05D005294 9.8e-89 330.9 252 68.3
Nn1g02944 Nelumbo nucifera HOM05D004185 ORTHO05D005294 2.2e-88 329.7 230 71.7
Nitab4.5_0002655g0020 Nicotiana tabacum HOM05D004185 ORTHO05D005294 8.3e-88 327.8 283 62.9
CDE09G0075 Ceratophyllum demersum HOM05D004185 ORTHO05D005294 4.1e-87 325.5 263 64.3
ClCG01G007890 Citrullus lanatus HOM05D004185 ORTHO05D005294 2.0e-86 323.2 273 60.8
MELO3C005094.2 Cucumis melo HOM05D004185 ORTHO05D005294 2.7e-86 322.8 254 65.4
Nitab4.5_0000426g0080 Nicotiana tabacum HOM05D004185 ORTHO05D005294 2.7e-86 322.8 294 60.9
CsaV3_5G025000 Cucumis sativus L. HOM05D004185 ORTHO05D005294 1.3e-85 320.5 252 64.7
Gorai.006G057300 Gossypium raimondii HOM05D004185 ORTHO05D005294 5.0e-85 318.5 268 63.8
SHI18823 Sapria himalayana HOM05D004185 ORTHO05D005294 2.3e-82 309.7 252 62.7
Mapoly0010s0125 Marchantia polymorpha HOM05D004185 ORTHO05D005294 8.8e-82 307.8 229 69.0
Phvul.001G082700 Phaseolus vulgaris HOM05D004185 ORTHO05D005294 8.8e-82 307.8 199 77.9
SMO119G0194 Selaginella moellendorffii HOM05D004185 ORTHO05D005294 1.2e-81 307.4 274 59.9
SEGI_19426 Sequoiadendron giganteum HOM05D004185 ORTHO05D005294 1.2e-81 307.4 235 64.7
RcHm_v2.0_Chr5g0060441 Rosa chinensis HOM05D004185 ORTHO05D005294 3.4e-81 305.8 199 75.4
AagrBONN_evm.TU.Sc2ySwM_228.4587 Anthoceros agrestis HOM05D004185 ORTHO05D005294 3.1e-79 299.3 230 66.5
arahy.Tifrunner.gnm1.ann1.75SEPN Arachis hypogaea HOM05D004185 ORTHO05D005294 4.1e-79 298.9 281 60.1
CDE02G0170 Ceratophyllum demersum HOM05D004185 ORTHO05D005294 2.7e-78 296.2 215 67.9
Cc02_g08450 Coffea canephora HOM05D004185 ORTHO05D005294 2.7e-78 296.2 199 75.4
Pp3c19_11880 Physcomitrium patens HOM05D004185 ORTHO05D005294 5.9e-78 295.0 229 66.4
Sed0024479 Sechium edule HOM05D004185 ORTHO05D005294 3.8e-77 292.4 199 71.4
Hund11935 Selenicereus undatus HOM05D004185 ORTHO05D005294 6.6e-77 291.6 199 72.4
CSS0049496 Camellia sinensis var. sinensis HOM05D004185 ORTHO05D005294 2.5e-76 289.7 191 75.9
CBR_g41148 Chara braunii HOM05D004185 ORTHO05D005294 2.3e-74 283.1 239 61.1
MD03G1104300 Malus domestica HOM05D004185 ORTHO05D005294 6.8e-74 281.6 228 64.5
Gohir.D09G052300 Gossypium hirsutum HOM05D004185 ORTHO05D005294 7.5e-73 278.1 199 71.4
HPP92_023021 Vanilla planifolia HOM05D004185 ORTHO05D005294 7.5e-73 278.1 200 68.5
FAN02G1839 Fragaria x ananassa HOM05D004185 ORTHO05D005294 2.2e-72 276.6 206 68.4
Haze_15442 Corylus avellana HOM05D004185 ORTHO05D005294 3.2e-71 272.7 225 64.4
FvH4_6g09080 Fragaria vesca HOM05D004185 ORTHO05D005294 3.2e-71 272.7 187 71.1
MCO14G189 Micromonas commoda HOM05D004185 ORTHO05D005294 9.2e-71 271.2 234 59.4
CBR_g45683 Chara braunii HOM05D004185 ORTHO05D005294 3.9e-69 265.8 235 58.3
MBI07_g07565_MAGBIO Magnolia biondii HOM05D004185 ORTHO05D005294 9.8e-65 251.1 167 74.3
CSS0023313 Camellia sinensis var. sinensis HOM05D004185 ORTHO05D005294 2.0e-62 243.4 185 69.2
PRCOL_00000818 Prasinoderma coloniale HOM05D004185 ORTHO05D005294 3.9e-61 239.2 230 55.2
Cre13.g576650 Chlamydomonas reinhardtii HOM05D004185 ORTHO05D005294 1.1e-60 237.7 238 52.5
CSS0015772 Camellia sinensis var. sinensis HOM05D004185 ORTHO05D005294 9.8e-57 224.6 191 62.3
Gorai.008G088200 Gossypium raimondii HOM05D004185 ORTHO05D005294 2.2e-56 223.4 268 48.9
QL02p069093 Quercus lobata HOM05D004185 ORTHO05D005294 1.1e-50 204.5 146 68.5
Cc00_g25400 Coffea canephora HOM05D004185 ORTHO05D005294 4.1e-47 192.6 146 66.4
Nn7g37500 Nelumbo nucifera HOM05D004185 ORTHO05D005294 1.2e-46 191.0 157 62.4
Dinv33271 Davidia involucrata HOM05D004185 ORTHO05D005294 1.7e-45 187.2 206 52.4
Gorai.007G236100 Gossypium raimondii HOM05D004185 ORTHO05D005294 4.4e-41 172.6 131 67.2
Gohir.D11G219700 Gossypium hirsutum HOM05D004185 ORTHO05D005294 1.9e-39 167.2 131 66.4
vmacro12996 Vaccinium macrocarpon HOM05D004185 ORTHO05D005294 7.8e-38 161.8 158 58.2
Gohir.1Z049452 Gossypium hirsutum HOM05D004185 ORTHO05D005294 8.7e-37 158.3 130 63.8
Gohir.1Z049352 Gossypium hirsutum HOM05D004185 ORTHO05D005294 5.6e-36 155.6 100 77.0
Gohir.D12G080201 Gossypium hirsutum HOM05D004185 ORTHO05D005294 5.6e-36 155.6 100 77.0
CDE01G0632 Ceratophyllum demersum HOM05D004185 ORTHO05D005294 4.9e-32 142.5 109 69.7
Prupe.6G096900 Prunus persica HOM05D004185 ORTHO05D005294 8.4e-32 141.7 123 58.5
MD03G1104400 Malus domestica HOM05D004185 ORTHO05D005294 1.1e-28 131.3 157 47.1
Gohir.D11G259201 Gossypium hirsutum HOM05D002015 ORTHO05D016007 2.5e-28 130.2 74 87.8
Gohir.D01G143966 Gossypium hirsutum HOM05D002015 ORTHO05D016007 9.6e-28 128.3 74 86.5
Gohir.D02G127900 Gossypium hirsutum HOM05D002015 ORTHO05D016007 1.3e-27 127.9 74 86.5
Gorai.002G177700 Gossypium raimondii HOM05D002015 ORTHO05D016007 1.6e-27 127.5 74 86.5
Gohir.D04G064100 Gossypium hirsutum HOM05D002015 ORTHO05D016007 6.2e-27 125.6 74 83.8
Ca_29370_v3 Cicer arietinum L. HOM05D004185 ORTHO05D005294 2.9e-24 116.7 196 35.7
Nn7g37501 Nelumbo nucifera HOM05D004185 ORTHO05D005294 1.3e-19 101.3 70 71.4
arahy.Tifrunner.gnm1.ann1.R9VNWC Arachis hypogaea HOM05D004185 ORTHO05D085194 8.1e-19 98.6 135 45.9
QL02p069129 Quercus lobata HOM05D004185 ORTHO05D005294 1.8e-18 97.4 64 75.0
SMO179G0001 Selaginella moellendorffii HOM05D004185 ORTHO05D005294 6.5e-16 89.0 64 71.9
QL02p068903 Quercus lobata HOM05D004185 ORTHO05D005294 8.4e-16 88.6 63 73.0
QL02p069147 Quercus lobata HOM05D004185 ORTHO05D005294 4.2e-15 86.3 66 66.7
Glyma.11G241900 Glycine max HOM05D004185 ORTHO05D005294 6.0e-14 82.4 64 67.2
Gorai.005G143700 Gossypium raimondii HOM05D004185 ORTHO05D016007 5.1e-13 79.3 44 88.6
Gohir.D13G151200 Gossypium hirsutum HOM05D004185 ORTHO05D016007 5.7e-12 75.9 44 81.8
QL02p069014 Quercus lobata HOM05D004185 ORTHO05D005294 1.3e-11 74.7 46 82.6
A09p34420 Brassica napus HOM05D004185 ORTHO05D040565 5.3e-10 69.3 37 81.1
BraA09t38986Z Brassica rapa HOM05D004185 ORTHO05D040565 5.3e-10 69.3 37 81.1
DCAR_020016 Daucus carota HOM05D004185 ORTHO05D005294 9.0e-10 68.6 61 59.0
SMO119G0521 Selaginella moellendorffii HOM05D004185 ORTHO05D005294 1.2e-09 68.2 64 57.8
Cfa023091 Carpinus fangiana HOM05D004109 ORTHO05D005867 1.7e-08 64.3 256 24.2
RcHm_v2.0_Chr5g0060451 Rosa chinensis HOM05D004185 ORTHO05D005294 1.6e-06 57.8 49 59.2


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