Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G43370 Arabidopsis lyrata HOM05D008719 ORTHO05D010898 9.6e-128 460.3 255 100.0
AT1G29530 Arabidopsis thaliana HOM05D008719 ORTHO05D010898 2.4e-94 349.4 255 78.8
Carub.0001s2776 Capsella rubella HOM05D008719 ORTHO05D010898 9.1e-78 294.3 261 68.6
CARHR028920 Cardamine hirsuta HOM05D008719 ORTHO05D010898 4.2e-75 285.4 261 67.4
Sp1g25470 Schrenkiella parvula HOM05D008719 ORTHO05D010898 4.0e-73 278.9 265 68.3
Thhalv10008596m.g Eutrema salsugineum HOM05D008719 ORTHO05D010898 3.3e-67 259.2 264 63.3
BcaB07g32545 Brassica carinata HOM05D008719 ORTHO05D010898 3.7e-47 192.6 266 54.9
BcaC01g00117 Brassica carinata HOM05D008719 ORTHO05D010898 1.6e-45 187.2 261 57.5
A09p36830 Brassica napus HOM05D008719 ORTHO05D010898 1.6e-45 187.2 265 54.0
BraA09t39201Z Brassica rapa HOM05D008719 ORTHO05D010898 1.6e-45 187.2 265 54.0
BcaB03g12165 Brassica carinata HOM05D008719 ORTHO05D010898 1.5e-43 180.6 266 57.1
C03p75980 Brassica napus HOM05D008719 ORTHO05D010898 1.6e-42 177.2 226 58.4
BolC3t19849H Brassica oleracea HOM05D008719 ORTHO05D010898 4.7e-42 175.6 226 58.0
C07p16190 Brassica napus HOM05D008719 ORTHO05D010898 8.1e-42 174.9 257 52.5
Thhalv10017155m.g Eutrema salsugineum HOM05D008719 ORTHO05D010898 2.4e-41 173.3 261 49.4
A08p25000 Brassica napus HOM05D008719 ORTHO05D010898 5.8e-40 168.7 269 52.4
BraA08t34455Z Brassica rapa HOM05D008719 ORTHO05D010898 5.8e-40 168.7 269 52.4
AT2G34310 Arabidopsis thaliana HOM05D008719 ORTHO05D010898 2.2e-39 166.8 260 47.7
BcaB03g13879 Brassica carinata HOM05D008719 ORTHO05D010898 1.9e-38 163.7 235 52.3
AL4G30240 Arabidopsis lyrata HOM05D008719 ORTHO05D010898 1.2e-37 161.0 259 47.9
Aa31LG6G6070 Aethionema arabicum HOM05D008719 ORTHO05D010898 7.8e-37 158.3 342 41.5
C05p28330 Brassica napus HOM05D008719 ORTHO05D010898 1.7e-36 157.1 258 47.7
BcaC05g26977 Brassica carinata HOM05D008719 ORTHO05D010898 3.9e-36 156.0 258 47.3
BolC5t31555H Brassica oleracea HOM05D008719 ORTHO05D010898 3.9e-36 156.0 258 47.3
BraA07t28855Z Brassica rapa HOM05D008719 ORTHO05D010898 3.9e-36 156.0 284 48.9
A07p10610 Brassica napus HOM05D008719 ORTHO05D010898 1.1e-35 154.5 268 50.4
Carub.0004s1595 Capsella rubella HOM05D008719 ORTHO05D010898 2.1e-34 150.2 269 44.2
BolC7t42112H Brassica oleracea HOM05D008719 ORTHO05D010898 4.4e-32 142.5 225 48.9
CARHR128380 Cardamine hirsuta HOM05D008719 ORTHO05D010898 2.2e-31 140.2 261 44.4
Sp4g16580 Schrenkiella parvula HOM05D008719 ORTHO05D010898 4.9e-31 139.0 262 43.5
BcaB02g09560 Brassica carinata HOM05D008719 ORTHO05D010898 1.4e-30 137.5 257 44.4
BcaB06g28746 Brassica carinata HOM05D008719 ORTHO05D010898 7.6e-24 115.2 261 42.5
A05p11350 Brassica napus HOM05D008719 ORTHO05D010898 1.7e-23 114.0 259 40.9
BraA04t18131Z Brassica rapa HOM05D008719 ORTHO05D010898 2.4e-22 110.2 261 41.0
BolC4t27834H Brassica oleracea HOM05D008719 ORTHO05D010898 4.2e-22 109.4 261 41.4
C04p63660 Brassica napus HOM05D008719 ORTHO05D010898 9.3e-22 108.2 261 40.6
A04p26270 Brassica napus HOM05D008719 ORTHO05D010898 1.2e-21 107.8 261 40.2
C04p14710 Brassica napus HOM05D008719 ORTHO05D010898 3.5e-21 106.3 263 37.3
THA.LOC104820622 Tarenaya hassleriana HOM05D008719 ORTHO05D010898 3.3e-19 99.8 258 36.8
THA.LOC104814270 Tarenaya hassleriana HOM05D008719 ORTHO05D010898 3.3e-11 73.2 257 33.5
BcaC02g11497 Brassica carinata HOM05D008719 ORTHO05D010898 1.6e-10 70.9 98 45.9
BcaC06g35438 Brassica carinata HOM05D008719 ORTHO05D010898 2.6e-08 63.5 176 38.1
Lalb_Chr08g0233301 Lupinus albus HOM05D009013 ORTHO05D009761 1.3e-07 61.2 295 30.2
Lalb_Chr07g0186121 Lupinus albus HOM05D009013 ORTHO05D009761 2.9e-07 60.1 164 34.8
Ciclev10017480m.g Citrus clementina HOM05D009852 ORTHO05D009761 1.4e-06 57.8 152 34.2
Prupe.4G073200 Prunus persica HOM05D014736 ORTHO05D009761 1.4e-06 57.8 148 30.4
Hma1.2p1_0015F.1_g010420 Hydrangea macrophylla HOM05D009013 ORTHO05D009761 4.2e-06 56.2 105 35.2
MD05G1292200 Malus domestica HOM05D014736 ORTHO05D009761 4.2e-06 56.2 145 29.7
Glyma.15G195700 Glycine max HOM05D009013 ORTHO05D009761 5.5e-06 55.8 323 28.8
Phvul.009G214600 Phaseolus vulgaris HOM05D009013 ORTHO05D009761 5.5e-06 55.8 333 28.8
Thecc.06G158200 Theobroma cacao HOM05D009852 ORTHO05D009761 7.2e-06 55.5 161 32.3
CiPaw.09G129900 Carya illinoinensis HOM05D009013 ORTHO05D009761 9.3e-06 55.1 69 42.0


User provided reference genes

Program Settings