Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G42150 Arabidopsis lyrata HOM05D006452 ORTHO05D008068 0.0e+00 1205.7 617 100.0
AT1G28530 Arabidopsis thaliana HOM05D006452 ORTHO05D008068 0.0e+00 1134.8 617 94.0
Carub.0001s2699 Capsella rubella HOM05D006452 ORTHO05D008068 0.0e+00 1077.8 609 91.1
CARHR028010 Cardamine hirsuta HOM05D006452 ORTHO05D008068 0.0e+00 1077.4 613 91.0
Sp1g24780 Schrenkiella parvula HOM05D006452 ORTHO05D008068 2.7e-309 1064.7 616 89.1
Thhalv10007091m.g Eutrema salsugineum HOM05D006452 ORTHO05D008068 1.2e-304 1049.3 617 87.5
BcaC01g00067 Brassica carinata HOM05D006452 ORTHO05D008068 1.5e-299 1032.3 625 86.4
BolC3t19793H Brassica oleracea HOM05D006452 ORTHO05D008068 9.0e-297 1023.1 626 85.5
C03p75340 Brassica napus HOM05D006452 ORTHO05D008068 4.5e-296 1020.8 626 85.6
BcaB03g12098 Brassica carinata HOM05D006452 ORTHO05D008068 1.0e-295 1019.6 622 85.4
A08p25460 Brassica napus HOM05D006452 ORTHO05D008068 6.5e-295 1016.9 624 84.8
BraA08t34497Z Brassica rapa HOM05D006452 ORTHO05D008068 7.1e-294 1013.4 621 85.0
Aa31LG6G11040 Aethionema arabicum HOM05D006452 ORTHO05D008068 7.7e-264 913.7 707 70.6
THA.LOC104812622 Tarenaya hassleriana HOM05D006452 ORTHO05D008068 5.4e-249 864.4 608 73.5
Duzib235G0445 Durio zibethinus HOM05D006452 ORTHO05D008068 4.8e-189 665.2 618 55.7
Gorai.010G157000 Gossypium raimondii HOM05D006452 ORTHO05D008068 6.2e-189 664.8 619 56.9
Ciclev10014636m.g Citrus clementina HOM05D006452 ORTHO05D008068 1.2e-187 660.6 571 59.7
RcHm_v2.0_Chr5g0009531 Rosa chinensis HOM05D006452 ORTHO05D008068 3.4e-187 659.1 607 58.3
Gohir.A06G134400 Gossypium hirsutum HOM05D006452 ORTHO05D008068 2.9e-186 656.0 619 56.4
Thecc.06G178700 Theobroma cacao HOM05D006452 ORTHO05D008068 4.9e-186 655.2 611 55.6
Gohir.D06G135100 Gossypium hirsutum HOM05D006452 ORTHO05D008068 1.2e-184 650.6 620 56.3
Cfa000544 Carpinus fangiana HOM05D006452 ORTHO05D008068 2.1e-184 649.8 571 57.3
QL05p043485 Quercus lobata HOM05D006452 ORTHO05D008068 1.0e-183 647.5 592 57.1
FvH4_3g08370 Fragaria vesca HOM05D006452 ORTHO05D008068 2.3e-183 646.4 576 58.5
CiPaw.09G065500 Carya illinoinensis HOM05D006452 ORTHO05D008068 8.7e-183 644.4 570 57.2
CSS0041533 Camellia sinensis var. sinensis HOM05D006452 ORTHO05D008068 4.5e-179 632.1 600 55.5
Sabra04G0032100 Salix brachista HOM05D006452 ORTHO05D008068 1.3e-178 630.6 623 52.5
Manes.17G051000 Manihot esculenta HOM05D006452 ORTHO05D008068 1.7e-178 630.2 618 53.2
TAR629G0815 Trochodendron aralioides HOM05D006452 ORTHO05D008068 5.0e-178 628.6 625 53.0
GSVIVG01021140001 Vitis vinifera HOM05D006452 ORTHO05D008068 5.0e-178 628.6 572 56.1
Actinidia39488 Actinidia chinensis HOM05D006452 ORTHO05D008068 5.5e-177 625.2 601 53.9
CANSAT35G2027 Cannabis sativa HOM05D006452 ORTHO05D008068 1.2e-176 624.0 595 54.5
MD05G1308100 Malus domestica HOM05D006452 ORTHO05D008068 1.2e-176 624.0 618 54.4
COL.COLO4_31396 Corchorus olitorius HOM05D006452 ORTHO05D008068 8.7e-175 617.8 584 54.3
Hma1.2p1_1465F.1_g285350 Hydrangea macrophylla HOM05D006452 ORTHO05D008068 1.6e-173 613.6 558 58.1
Medtr2g014890 Medicago truncatula HOM05D006452 ORTHO05D008068 1.2e-171 607.4 570 56.1
Phvul.006G180500 Phaseolus vulgaris HOM05D006452 ORTHO05D008068 1.9e-169 600.1 570 56.7
Lalb_Chr18g0059351 Lupinus albus HOM05D006452 ORTHO05D008068 2.5e-169 599.7 605 53.1
Prupe.4G054700 Prunus persica HOM05D006452 ORTHO05D008068 9.4e-169 597.8 562 56.0
TWI38G0383 Tripterygium wilfordii HOM05D006452 ORTHO05D008068 1.6e-168 597.0 571 53.9
Glyma.10G069100 Glycine max HOM05D006452 ORTHO05D008068 2.1e-168 596.7 615 52.8
Glyma.13G152304 Glycine max HOM05D006452 ORTHO05D008068 2.1e-168 596.7 610 53.4
FAN25G3335 Fragaria x ananassa HOM05D006452 ORTHO05D008068 3.9e-167 592.4 570 55.6
FAN21G3590 Fragaria x ananassa HOM05D006452 ORTHO05D008068 1.1e-166 590.9 572 55.2
Lj1A1199G43 Lonicera japonica HOM05D006452 ORTHO05D008068 1.1e-166 590.9 630 51.4
Lj6g0021964 Lotus japonicus HOM05D006452 ORTHO05D008068 1.1e-166 590.9 619 52.2
VMungo0540G0818 Vigna mungo HOM05D006452 ORTHO05D008068 2.5e-166 589.7 611 52.9
Nitab4.5_0001375g0100 Nicotiana tabacum HOM05D006452 ORTHO05D008068 3.3e-166 589.3 606 53.1
Ca_00397_v3 Cicer arietinum L. HOM05D006452 ORTHO05D008068 4.3e-166 589.0 630 51.7
arahy.Tifrunner.gnm1.ann1.FLUH97 Arachis hypogaea HOM05D006452 ORTHO05D008068 1.3e-162 577.4 622 50.5
MELO3C007247.2 Cucumis melo HOM05D006452 ORTHO05D008068 3.8e-162 575.9 573 53.6
Nitab4.5_0000516g0020 Nicotiana tabacum HOM05D006452 ORTHO05D008068 9.4e-161 571.2 629 51.2
arahy.Tifrunner.gnm1.ann1.228Z0R Arachis hypogaea HOM05D006452 ORTHO05D008068 1.4e-159 567.4 625 49.8
FAN11G3013 Fragaria x ananassa HOM05D006452 ORTHO05D008068 1.8e-159 567.0 575 55.0
Nn1g06365 Nelumbo nucifera HOM05D006452 ORTHO05D008068 1.1e-158 564.3 636 48.4
Rhsim02G0137400 Rhododendron simsii HOM05D006452 ORTHO05D008068 3.3e-158 562.8 646 48.9
Oeu001094.1 Olea europaea HOM05D006452 ORTHO05D008068 5.3e-156 555.4 586 51.5
Sopen03g002290 Solanum pennellii HOM05D006452 ORTHO05D008068 9.1e-156 554.7 577 50.8
EL10Ac8g20457 Beta vulgaris HOM05D006452 ORTHO05D008068 4.5e-155 552.4 636 47.5
PGSC0003DMG400012819 Solanum tuberosum HOM05D006452 ORTHO05D008068 4.5e-155 552.4 604 50.2
AUR62014896 Chenopodium quinoa HOM05D006452 ORTHO05D008068 1.0e-154 551.2 570 50.2
AUR62031101 Chenopodium quinoa HOM05D006452 ORTHO05D008068 3.2e-153 546.2 570 49.6
ClCG01G023380 Citrullus lanatus HOM05D006452 ORTHO05D008068 3.2e-153 546.2 610 49.8
Aqoxy4G00567 Aquilegia oxysepala HOM05D006452 ORTHO05D008068 1.6e-152 543.9 643 48.2
Haze_06337 Corylus avellana HOM05D006452 ORTHO05D008068 4.7e-152 542.3 616 48.7
Cc00_g07720 Coffea canephora HOM05D006452 ORTHO05D008068 2.0e-150 537.0 567 49.0
Atru.chr10.1767 Acer truncatum HOM05D006452 ORTHO05D008068 7.4e-150 535.0 497 54.3
Migut.M01092 Erythranthe guttata HOM05D006452 ORTHO05D008068 5.3e-148 528.9 601 49.4
Lsat_1_v5_gn_4_51620 Lactuca sativa HOM05D006452 ORTHO05D008068 2.6e-147 526.6 609 47.6
ECA234G2428 Erigeron canadensis HOM05D006452 ORTHO05D008068 2.9e-146 523.1 616 47.4
HanXRQChr16g0518591 Helianthus annuus HOM05D006452 ORTHO05D008068 4.2e-145 519.2 607 46.1
PSO832G2664 Papaver somniferum HOM05D006452 ORTHO05D008068 4.8e-141 505.8 676 43.2
Dinv40619 Davidia involucrata HOM05D006452 ORTHO05D008068 7.0e-140 501.9 455 56.5
PSO210G4080 Papaver somniferum HOM05D006452 ORTHO05D008068 1.3e-138 497.7 676 42.5
Cpa.g.sc7.8 Carica papaya HOM05D006452 ORTHO05D008068 1.2e-134 484.6 444 58.6
SalBow8G3895 Salvia bowleyana HOM05D006452 ORTHO05D008068 5.7e-134 482.3 580 46.6
SGA_v2.0_scaffold16G07655 Striga asiatica HOM05D006452 ORTHO05D008068 9.1e-132 474.9 575 46.3
Potri.004G051000 Populus trichocarpa HOM05D006452 ORTHO05D008068 8.0e-128 461.8 419 53.7
FAN16G3312 Fragaria x ananassa HOM05D006452 ORTHO05D008068 7.5e-126 455.3 420 55.7
Solyc03g006280.4 Solanum lycopersicum HOM05D006452 ORTHO05D008068 7.0e-124 448.7 575 44.5
Hma1.2p1_1465F.1_g285340 Hydrangea macrophylla HOM05D006452 ORTHO05D008068 3.5e-123 446.4 421 57.7
TPR.G11703 Trifolium pratense HOM05D006452 ORTHO05D008068 1.3e-122 444.5 437 53.3
Sed0012413 Sechium edule HOM05D006452 ORTHO05D008068 2.3e-122 443.7 466 51.3
DCAR_006579 Daucus carota HOM05D006452 ORTHO05D008068 1.2e-120 438.0 603 43.3
ATR0602G160 Amborella trichopoda HOM05D006452 ORTHO05D008068 1.6e-120 437.6 643 40.4
Sc17g0005860 Simmondsia chinensis HOM05D006452 ORTHO05D008068 1.3e-114 417.9 621 42.2
unitig_8.g4630 Utricularia gibba HOM05D006452 ORTHO05D008068 6.6e-114 415.6 623 40.6
MBI07_g32549_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 5.6e-113 412.5 538 42.0
CAN.G189.65 Capsicum annuum HOM05D006452 ORTHO05D008068 8.1e-112 408.7 418 51.4
HPP92_000497 Vanilla planifolia HOM05D006452 ORTHO05D008068 8.9e-111 405.2 617 42.0
PGR004G2109 Punica granatum HOM05D006452 ORTHO05D008068 1.3e-109 401.4 425 49.6
vmacro15945 Vaccinium macrocarpon HOM05D006452 ORTHO05D008068 6.4e-109 399.1 401 52.9
Eucgr.D00580 Eucalyptus grandis HOM05D006452 ORTHO05D008068 2.7e-107 393.7 412 51.5
Peaxi162Scf01018g00215 Petunia axillaris HOM05D006452 ORTHO05D008068 1.7e-106 391.0 608 40.8
Psat1g201640 Pisum sativum HOM05D006452 ORTHO05D008068 1.2e-102 378.3 414 51.0
CsaV3_6G050510 Cucumis sativus L. HOM05D006452 ORTHO05D008068 4.4e-102 376.3 421 48.0
CDE10G0189 Ceratophyllum demersum HOM05D006452 ORTHO05D008068 1.6e-99 367.9 496 41.3
Hund23835 Selenicereus undatus HOM05D006452 ORTHO05D008068 6.0e-99 365.9 495 45.1
Os02g0109900 Oryza sativa ssp. japonica HOM05D006452 ORTHO05D008068 3.8e-85 320.1 588 34.9
MBI07_g06446_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 1.9e-81 307.8 604 33.3
Zm00001eb229620 Zea mays HOM05D006452 ORTHO05D008068 7.4e-81 305.8 578 35.5
CAN.G1286.36 Capsicum annuum HOM05D006452 ORTHO05D008068 1.3e-66 258.5 289 49.1
Mapoly0052s0014 Marchantia polymorpha HOM05D006452 ORTHO05D008068 9.7e-57 225.7 597 29.0
TPR.G10795 Trifolium pratense HOM05D006452 ORTHO05D008068 1.6e-51 208.4 215 52.1
CAN.G801.36 Capsicum annuum HOM05D006452 ORTHO05D008068 1.4e-50 205.3 234 47.4
Psat1g201600 Pisum sativum HOM05D006452 ORTHO05D008068 2.5e-44 184.5 198 51.5
AagrBONN_evm.TU.Sc2ySwM_228.5590 Anthoceros agrestis HOM05D006452 ORTHO05D008068 2.7e-43 181.0 623 27.6
vmacro15946 Vaccinium macrocarpon HOM05D006452 ORTHO05D008068 2.2e-40 171.4 265 38.1
Lsat_1_v5_gn_9_9480 Lactuca sativa HOM05D006452 ORTHO05D008068 1.7e-32 145.2 226 39.8
SEGI_16257 Sequoiadendron giganteum HOM05D006452 ORTHO05D008068 5.0e-29 133.7 311 33.4
BcaC01g06820 Brassica carinata HOM05D006452 ORTHO05D008068 7.2e-28 129.8 93 76.3
unitig_8.g4641 Utricularia gibba HOM05D006452 ORTHO05D008068 4.0e-26 124.0 158 45.6
SEGI_13408 Sequoiadendron giganteum HOM05D006452 ORTHO05D008068 2.9e-21 107.8 208 31.2
CDE10G0511 Ceratophyllum demersum HOM05D002520 ORTHO05D003144 8.0e-19 99.8 129 50.4
Pp3c17_22050 Physcomitrium patens HOM05D006452 ORTHO05D008068 1.8e-18 98.6 354 28.0
CAN.G638.7 Capsicum annuum HOM05D006452 ORTHO05D008068 1.3e-16 92.4 165 40.0
GSVIVG01026713001 Vitis vinifera HOM05D006452 ORTHO05D008068 1.0e-13 82.8 66 68.2
MBI15_g20021_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 1.7e-13 82.0 76 53.9
Peaxi162Scf01018g00213 Petunia axillaris HOM05D006452 ORTHO05D008068 1.8e-10 72.0 67 56.7
FvH4_3g08350 Fragaria vesca HOM05D003433 ORTHO05D003921 4.9e-08 63.9 47 63.8
MBI05_g40582_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D029689 1.4e-07 62.4 69 42.0
MBI05_g44052_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 1.4e-07 62.4 69 42.0


User provided reference genes

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