Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G39540 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 6.6e-30 133.3 62 100.0
AL5G14150 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 2.3e-27 124.8 62 91.9
AL6G36070 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 8.9e-19 96.3 61 70.5
AL1G54420 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 2.6e-18 94.7 61 68.9
CARHR184030 Cardamine hirsuta HOM05D007592 ORTHO05D004645 2.6e-18 94.7 61 72.1
CARHR180790 Cardamine hirsuta HOM05D007592 ORTHO05D004645 1.1e-16 89.4 62 67.7
Manes.13G090650 Manihot esculenta HOM05D007592 ORTHO05D004645 1.5e-13 79.0 57 59.6
Manes.04G041320 Manihot esculenta HOM05D007592 ORTHO05D004645 9.5e-13 76.3 57 56.1
Manes.03G086209 Manihot esculenta HOM05D007592 ORTHO05D004645 1.2e-12 75.9 57 56.1
Manes.12G071166 Manihot esculenta HOM05D007743 ORTHO05D010219 1.2e-12 75.9 57 56.1
Manes.15G155750 Manihot esculenta HOM05D007743 ORTHO05D010219 2.1e-12 75.1 57 56.1
Manes.14G157656 Manihot esculenta HOM05D007743 ORTHO05D010219 3.6e-12 74.3 60 53.3
Ciclev10033648m.g Citrus clementina HOM05D007592 ORTHO05D004645 1.2e-10 69.3 61 49.2
Atru.chr13.1766 Acer truncatum HOM05D007592 ORTHO05D004645 1.5e-10 68.9 61 47.5
Rhsim08G0115200 Rhododendron simsii HOM05D007743 ORTHO05D004645 2.6e-10 68.2 57 47.4
Manes.09G090928 Manihot esculenta HOM05D007592 ORTHO05D004645 3.4e-10 67.8 60 48.3
Oeu029633.1 Olea europaea HOM05D007592 ORTHO05D004645 3.4e-10 67.8 61 47.5
Atru.chr8.1335 Acer truncatum HOM05D007592 ORTHO05D004645 4.4e-10 67.4 54 50.0
BolC6t37310H Brassica oleracea HOM05D007592 ORTHO05D004645 5.8e-10 67.0 61 45.9
BraA09t38299Z Brassica rapa HOM05D007592 ORTHO05D004645 5.8e-10 67.0 61 45.9
DCAR_018612 Daucus carota HOM05D007592 ORTHO05D004645 5.8e-10 67.0 60 48.3
C06p21250 Brassica napus HOM05D007592 ORTHO05D004645 1.3e-09 65.9 61 45.9
Ciclev10027215m.g Citrus clementina HOM05D007592 ORTHO05D004645 1.3e-09 65.9 61 45.9
AT1G24380 Arabidopsis thaliana HOM05D007592 ORTHO05D004645 1.7e-09 65.5 61 45.9
AT4G10230 Arabidopsis thaliana HOM05D007592 ORTHO05D004645 1.7e-09 65.5 61 45.9
CARHR029530 Cardamine hirsuta HOM05D007592 ORTHO05D004645 1.7e-09 65.5 57 47.4
CANSAT35G0055 Cannabis sativa HOM05D007592 ORTHO05D004645 2.2e-09 65.1 59 47.5
AL9U10800 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 2.9e-09 64.7 41 68.3
BcaB04g19609 Brassica carinata HOM05D007743 ORTHO05D004645 3.7e-09 64.3 60 45.0
BcaB06g28792 Brassica carinata HOM05D007743 ORTHO05D004645 4.9e-09 63.9 60 43.3
C04p29390 Brassica napus HOM05D007592 ORTHO05D004645 4.9e-09 63.9 61 44.3
DCAR_001490 Daucus carota HOM05D007592 ORTHO05D004645 4.9e-09 63.9 60 46.7
CSS0032344 Camellia sinensis var. sinensis HOM05D007743 ORTHO05D004645 6.4e-09 63.5 57 40.4
Ciclev10003950m.g Citrus clementina HOM05D007592 ORTHO05D004645 6.4e-09 63.5 61 45.9
Ciclev10016612m.g Citrus clementina HOM05D007592 ORTHO05D004645 6.4e-09 63.5 61 45.9
BcaC01g02275 Brassica carinata HOM05D007743 ORTHO05D004645 8.3e-09 63.2 56 46.4
CANSAT64G0010 Cannabis sativa HOM05D007592 ORTHO05D004645 8.3e-09 63.2 61 45.9
CANSAT25G1186 Cannabis sativa HOM05D007592 ORTHO05D004645 1.1e-08 62.8 61 49.2
Atru.chr11.1181 Acer truncatum HOM05D000214 ORTHO05D000131 4.1e-08 60.8 60 45.0
BcaB01g01748 Brassica carinata HOM05D007743 ORTHO05D004645 4.1e-08 60.8 60 43.3
BcaB07g33427 Brassica carinata HOM05D007743 ORTHO05D004645 4.1e-08 60.8 60 43.3
BcaB02g10737 Brassica carinata HOM05D007743 ORTHO05D004645 5.4e-08 60.5 57 43.9
CANSAT64G2577 Cannabis sativa HOM05D007592 ORTHO05D004645 5.4e-08 60.5 61 45.9
CSS0013406 Camellia sinensis var. sinensis HOM05D007743 ORTHO05D004645 9.2e-08 59.7 57 38.6
BcaB08g34421 Brassica carinata HOM05D007743 ORTHO05D004645 1.2e-07 59.3 59 42.4
Atru.chr5.2435 Acer truncatum HOM05D007743 ORTHO05D004645 2.1e-07 58.5 60 45.0
Migut.A00242 Erythranthe guttata HOM05D007592 ORTHO05D004645 3.5e-07 57.8 61 47.5
Atru.chr10.1040 Acer truncatum HOM05D007592 ORTHO05D004645 4.6e-07 57.4 61 44.3
Ciclev10003711m.g Citrus clementina HOM05D007592 ORTHO05D004645 4.6e-07 57.4 61 44.3
BcaC08g43897 Brassica carinata HOM05D007743 ORTHO05D004645 7.8e-07 56.6 60 41.7
Ciclev10023446m.g Citrus clementina HOM05D007592 ORTHO05D004645 1.7e-06 55.5 61 44.3
CARHR258700 Cardamine hirsuta HOM05D007592 ORTHO05D004645 2.3e-06 55.1 59 42.4
CSS0034959 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 6.6e-06 53.5 49 44.9
Atru.chr3.1033 Acer truncatum HOM05D007592 ORTHO05D004645 8.6e-06 53.1 61 41.0


User provided reference genes

Program Settings