Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G38440 Arabidopsis lyrata HOM05D007453 ORTHO05D009223 7.8e-112 407.1 206 100.0
AT1G27050 Arabidopsis thaliana HOM05D007453 ORTHO05D009223 1.9e-94 349.4 206 87.4
CARHR024860 Cardamine hirsuta HOM05D007453 ORTHO05D009223 1.4e-84 316.6 210 81.0
Sp1g21730 Schrenkiella parvula HOM05D007453 ORTHO05D009223 2.6e-83 312.4 212 81.1
Carub.0001s2392 Capsella rubella HOM05D007453 ORTHO05D009223 6.0e-80 301.2 209 79.9
BcaC06g35095 Brassica carinata HOM05D007453 ORTHO05D009223 3.0e-79 298.9 208 77.9
C07p19880 Brassica napus HOM05D007453 ORTHO05D009223 1.5e-78 296.6 208 77.4
BolC7t42507H Brassica oleracea HOM05D007453 ORTHO05D009223 1.5e-78 296.6 208 77.4
Aa31LG7G8100 Aethionema arabicum HOM05D007453 ORTHO05D009223 2.5e-78 295.8 220 73.6
BcaB03g14102 Brassica carinata HOM05D007453 ORTHO05D009223 6.9e-76 287.7 211 76.8
Thhalv10008803m.g Eutrema salsugineum HOM05D007453 ORTHO05D009223 1.3e-74 283.5 206 76.2
BraA07t29098Z Brassica rapa HOM05D007453 ORTHO05D009223 1.9e-70 269.6 208 73.1
A07p13280 Brassica napus HOM05D007453 ORTHO05D009223 3.7e-69 265.4 208 72.6
THA.LOC104822931 Tarenaya hassleriana HOM05D007453 ORTHO05D009223 4.6e-64 248.4 209 67.0
QL03p065949 Quercus lobata HOM05D007453 ORTHO05D009223 2.2e-58 229.6 211 63.5
Cpa.g.sc1379.2 Carica papaya HOM05D007453 ORTHO05D009223 4.2e-57 225.3 212 59.4
Prupe.1G267100 Prunus persica HOM05D007453 ORTHO05D009223 8.8e-55 217.6 211 60.2
TWI75G0120 Tripterygium wilfordii HOM05D007453 ORTHO05D009223 2.0e-54 216.5 207 58.5
CiPaw.05G140500 Carya illinoinensis HOM05D007453 ORTHO05D009223 3.7e-53 212.2 207 57.0
Cfa009043 Carpinus fangiana HOM05D007453 ORTHO05D009223 8.2e-53 211.1 206 56.3
Gohir.D05G323400 Gossypium hirsutum HOM05D007453 ORTHO05D009223 1.4e-52 210.3 211 56.9
CsaV3_5G032280 Cucumis sativus L. HOM05D007453 ORTHO05D009223 2.0e-51 206.5 206 55.3
MD13G1079700 Malus domestica HOM05D007453 ORTHO05D009223 4.5e-51 205.3 218 55.5
Duzib248G0401 Durio zibethinus HOM05D007453 ORTHO05D009223 1.0e-50 204.1 206 57.3
FAN07G0059 Fragaria x ananassa HOM05D007453 ORTHO05D009223 1.7e-50 203.4 213 54.9
Lalb_Chr10g0097941 Lupinus albus HOM05D007453 ORTHO05D009223 5.0e-50 201.8 206 56.8
FvH4_4g32080 Fragaria vesca HOM05D007453 ORTHO05D009223 8.5e-50 201.1 213 54.5
FAN22G0202 Fragaria x ananassa HOM05D007453 ORTHO05D009223 8.5e-50 201.1 213 54.9
Duzib248G0483 Durio zibethinus HOM05D007453 ORTHO05D009223 1.5e-49 200.3 206 54.9
Thecc.02G232500 Theobroma cacao HOM05D007453 ORTHO05D009223 5.5e-49 198.4 206 57.3
Ciclev10032837m.g Citrus clementina HOM05D007453 ORTHO05D009223 1.2e-48 197.2 206 55.3
COL.COLO4_36183 Corchorus olitorius HOM05D007453 ORTHO05D009223 1.2e-48 197.2 207 56.0
Ca_07373_v3 Cicer arietinum L. HOM05D007453 ORTHO05D009223 2.3e-47 193.0 206 54.4
Gorai.009G347100 Gossypium raimondii HOM05D007453 ORTHO05D009223 8.8e-47 191.0 206 53.9
Duzib251G0796 Durio zibethinus HOM05D007453 ORTHO05D009223 1.5e-46 190.3 206 53.9
PGR119G1700 Punica granatum HOM05D007453 ORTHO05D009223 2.6e-46 189.5 216 52.8
Manes.05G095900 Manihot esculenta HOM05D007453 ORTHO05D009223 3.3e-46 189.1 206 55.8
TPR.G29466 Trifolium pratense HOM05D007453 ORTHO05D009223 3.3e-46 189.1 206 53.4
Haze_12073 Corylus avellana HOM05D007453 ORTHO05D009223 4.4e-46 188.7 235 48.5
MELO3C012060.2 Cucumis melo HOM05D007453 ORTHO05D009223 9.7e-46 187.6 206 51.0
Psat2g125360 Pisum sativum HOM05D007453 ORTHO05D009223 1.3e-45 187.2 206 52.9
RcHm_v2.0_Chr4g0440771 Rosa chinensis HOM05D007453 ORTHO05D009223 3.7e-45 185.7 213 54.0
Medtr5g038225 Medicago truncatula HOM05D007453 ORTHO05D009223 3.1e-44 182.6 206 52.9
arahy.Tifrunner.gnm1.ann1.QA8CWD Arachis hypogaea HOM05D007453 ORTHO05D009223 4.1e-44 182.2 208 55.3
VMungo1215G3437 Vigna mungo HOM05D007453 ORTHO05D009223 4.1e-44 182.2 206 54.9
Lj2g0026857 Lotus japonicus HOM05D007453 ORTHO05D009223 9.1e-44 181.0 206 53.9
arahy.Tifrunner.gnm1.ann1.D3ZUUX Arachis hypogaea HOM05D007453 ORTHO05D009223 1.2e-43 180.6 208 53.4
Dinv24949 Davidia involucrata HOM05D007453 ORTHO05D009223 1.2e-43 180.6 206 50.5
ClCG05G024650 Citrullus lanatus HOM05D007453 ORTHO05D009223 2.7e-43 179.5 177 55.9
FAN12G0628 Fragaria x ananassa HOM05D007453 ORTHO05D009223 3.5e-43 179.1 213 51.6
Phvul.002G067300 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 3.5e-43 179.1 206 53.9
Sed0013591 Sechium edule HOM05D007453 ORTHO05D009223 5.0e-42 175.3 216 48.1
CiPaw.06G080300 Carya illinoinensis HOM05D007453 ORTHO05D009223 1.5e-41 173.7 161 57.8
Glyma.01G041651 Glycine max HOM05D007453 ORTHO05D009223 1.5e-41 173.7 207 51.7
Atru.chr11.1862 Acer truncatum HOM05D007453 ORTHO05D009223 1.9e-41 173.3 193 51.8
HanXRQChr17g0544601 Helianthus annuus HOM05D007453 ORTHO05D009223 1.9e-41 173.3 212 49.1
Cc11_g13560 Coffea canephora HOM05D007453 ORTHO05D009223 1.0e-39 167.5 229 45.4
Eucgr.B03407 Eucalyptus grandis HOM05D007453 ORTHO05D009223 1.8e-39 166.8 209 50.7
Gohir.A05G321200 Gossypium hirsutum HOM05D007453 ORTHO05D009223 1.8e-39 166.8 154 57.8
Actinidia08212 Actinidia chinensis HOM05D007453 ORTHO05D009223 2.3e-39 166.4 208 49.5
Lsat_1_v5_gn_3_49860 Lactuca sativa HOM05D007453 ORTHO05D009223 8.8e-39 164.5 174 51.7
GSVIVG01020080001 Vitis vinifera HOM05D007453 ORTHO05D009223 2.0e-38 163.3 206 49.5
Sabra10G0030300 Salix brachista HOM05D007453 ORTHO05D009223 3.4e-38 162.5 160 58.1
ECA246G4987 Erigeron canadensis HOM05D007453 ORTHO05D009223 9.8e-38 161.0 217 47.0
CSS0012607 Camellia sinensis var. sinensis HOM05D007453 ORTHO05D009223 1.7e-37 160.2 211 46.4
Hund05917 Selenicereus undatus HOM05D007453 ORTHO05D009223 3.7e-37 159.1 207 49.3
MSTRG.13399 Avicennia marina HOM05D007453 ORTHO05D009223 1.4e-36 157.1 213 42.3
TAR481G0010 Trochodendron aralioides HOM05D007453 ORTHO05D009223 1.4e-36 157.1 208 44.7
vmacro16323 Vaccinium macrocarpon HOM05D007453 ORTHO05D009223 1.4e-36 157.1 209 45.0
Glyma.02G022351 Glycine max HOM05D007453 ORTHO05D009223 4.1e-36 155.6 154 57.1
DCAR_031058 Daucus carota HOM05D007453 ORTHO05D009223 5.4e-36 155.2 211 50.2
Actinidia19855 Actinidia chinensis HOM05D007453 ORTHO05D009223 2.0e-35 153.3 208 48.6
PGSC0003DMG400017639 Solanum tuberosum HOM05D007453 ORTHO05D009223 2.0e-35 153.3 216 42.1
Solyc05g006960.3 Solanum lycopersicum HOM05D007453 ORTHO05D009223 7.7e-35 151.4 208 42.3
Sopen05g002920 Solanum pennellii HOM05D007453 ORTHO05D009223 7.7e-35 151.4 208 42.3
Phvul.002G077900 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 1.0e-34 151.0 169 50.9
Potri.010G034500 Populus trichocarpa HOM05D007453 ORTHO05D009223 3.3e-33 146.0 209 46.4
Nitab4.5_0000679g0070 Nicotiana tabacum HOM05D007453 ORTHO05D009223 4.2e-33 145.6 227 39.6
unitig_62.g23683 Utricularia gibba HOM05D007453 ORTHO05D009223 3.6e-32 142.5 214 42.1
SalBow8G2121 Salvia bowleyana HOM05D007453 ORTHO05D009223 4.7e-32 142.1 216 40.7
A07p13630 Brassica napus HOM05D007453 ORTHO05D009223 1.0e-31 141.0 133 64.7
Sc11g0001650 Simmondsia chinensis HOM05D007453 ORTHO05D009223 2.3e-31 139.8 206 44.2
SGA_v2.0_scaffold87G26973 Striga asiatica HOM05D007453 ORTHO05D009223 8.9e-31 137.9 217 40.6
Rhsim12G0129600 Rhododendron simsii HOM05D007453 ORTHO05D009223 1.2e-30 137.5 260 37.7
EL10Ac6g13141 Beta vulgaris HOM05D007453 ORTHO05D009223 2.2e-29 133.3 215 41.4
Migut.E00119 Erythranthe guttata HOM05D007453 ORTHO05D009223 8.3e-29 131.3 223 36.8
MSTRG.2362 Avicennia marina HOM05D007453 ORTHO05D009223 1.8e-28 130.2 221 37.1
Nitab4.5_0002969g0020 Nicotiana tabacum HOM05D007453 ORTHO05D009223 5.4e-28 128.6 230 38.3
MBI01_g12858_MAGBIO Magnolia biondii HOM05D007453 ORTHO05D009223 9.2e-28 127.9 207 40.6
PSO591G0176 Papaver somniferum HOM05D007453 ORTHO05D009223 4.5e-27 125.6 219 42.9
PSO832G2667 Papaver somniferum HOM05D007453 ORTHO05D009223 1.0e-26 124.4 220 41.8
Aqoxy3G03257 Aquilegia oxysepala HOM05D007453 ORTHO05D009223 9.5e-25 117.9 156 44.2
Lj6C173T12 Lonicera japonica HOM05D007453 ORTHO05D009223 3.6e-24 115.9 117 55.6
ATR0665G072 Amborella trichopoda HOM05D007453 ORTHO05D009223 1.0e-23 114.4 207 40.1
AUR62026455 Chenopodium quinoa HOM05D007453 ORTHO05D009223 2.3e-23 113.2 122 52.5
AUR62026264 Chenopodium quinoa HOM05D007453 ORTHO05D009223 4.0e-23 112.5 134 50.0
Peaxi162Scf00209g00516 Petunia axillaris HOM05D007453 ORTHO05D009223 5.2e-23 112.1 157 41.4
HPP92_001648 Vanilla planifolia HOM05D007453 ORTHO05D009223 9.8e-22 107.8 203 40.9
Dinv40682 Davidia involucrata HOM05D007453 ORTHO05D009223 2.9e-21 106.3 152 43.4
CDE05G3569 Ceratophyllum demersum HOM05D007453 ORTHO05D009223 5.4e-20 102.1 207 33.8
HPP92_001630 Vanilla planifolia HOM05D007453 ORTHO05D009223 5.0e-10 68.9 95 46.3
Nn4g23028 Nelumbo nucifera HOM05D007453 ORTHO05D009223 1.8e-07 60.5 92 41.3


User provided reference genes

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