Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G36990 Arabidopsis lyrata HOM05D000552 ORTHO05D080631 9.7e-56 219.9 113 100.0
AL1G52160 Arabidopsis lyrata HOM05D000552 ORTHO05D000469 7.0e-22 107.5 107 64.5
CARHR035790 Cardamine hirsuta HOM05D000552 ORTHO05D000469 4.6e-21 104.8 114 57.0
Carub.0001s3502 Capsella rubella HOM05D000552 ORTHO05D000469 3.3e-19 98.6 115 61.7
Thhalv10011442m.g Eutrema salsugineum HOM05D000552 ORTHO05D000469 7.3e-19 97.4 95 63.2
Sp1g33390 Schrenkiella parvula HOM05D000552 ORTHO05D000469 1.1e-17 93.6 114 53.5
AT1G44110 Arabidopsis thaliana HOM05D000552 ORTHO05D000469 4.0e-17 91.7 90 61.1
BcaB04g17597 Brassica carinata HOM05D000552 ORTHO05D000469 3.9e-12 75.1 88 58.0
C08p07360 Brassica napus HOM05D000552 ORTHO05D000469 8.6e-12 73.9 112 48.2
BcaC07g37302 Brassica carinata HOM05D000552 ORTHO05D000469 4.3e-11 71.6 103 49.5
BolC8t47577H Brassica oleracea HOM05D000552 ORTHO05D000469 4.3e-11 71.6 103 49.5
Aa31LG6G9430 Aethionema arabicum HOM05D000552 ORTHO05D000469 2.6e-08 62.4 115 40.0
C05p36380 Brassica napus HOM05D000552 ORTHO05D000469 1.3e-07 60.1 76 51.3
BcaC05g27650 Brassica carinata HOM05D000552 ORTHO05D000469 2.9e-07 58.9 76 50.0
A05p21640 Brassica napus HOM05D000552 ORTHO05D000469 6.4e-07 57.8 93 46.2
BraA05t21086Z Brassica rapa HOM05D000552 ORTHO05D000469 6.4e-07 57.8 93 46.2
FAN20G1677 Fragaria x ananassa HOM05D000552 ORTHO05D000469 8.3e-07 57.4 45 66.7
Gohir.D05G239500 Gossypium hirsutum HOM05D000552 ORTHO05D000469 8.3e-07 57.4 107 36.4
Prupe.1G491700 Prunus persica HOM05D000552 ORTHO05D000469 1.1e-06 57.0 103 39.8
Gohir.A05G237400 Gossypium hirsutum HOM05D000552 ORTHO05D000469 1.4e-06 56.6 101 38.6
FvH4_2g27590 Fragaria vesca HOM05D000552 ORTHO05D000469 1.9e-06 56.2 45 64.4
FAN15G3293 Fragaria x ananassa HOM05D000552 ORTHO05D000469 1.9e-06 56.2 45 64.4
FAN24G1993 Fragaria x ananassa HOM05D000552 ORTHO05D000469 1.9e-06 56.2 45 64.4
Sabra02G0062600 Salix brachista HOM05D000552 ORTHO05D000469 1.9e-06 56.2 90 40.0
Cpa.g.sc64.133 Carica papaya HOM05D000552 ORTHO05D000469 2.4e-06 55.8 139 36.7
Gorai.009G248300 Gossypium raimondii HOM05D000552 ORTHO05D000469 2.4e-06 55.8 121 40.5
THA.LOC104808251 Tarenaya hassleriana HOM05D000552 ORTHO05D000469 2.4e-06 55.8 121 38.0
Sabra05G0137400 Salix brachista HOM05D000552 ORTHO05D000469 3.2e-06 55.5 55 52.7
Thecc.08G130800 Theobroma cacao HOM05D000552 ORTHO05D000469 3.2e-06 55.5 121 38.8
Duzib041G0622 Durio zibethinus HOM05D000552 ORTHO05D000469 4.1e-06 55.1 96 39.6
Manes.02G166800 Manihot esculenta HOM05D000552 ORTHO05D000469 4.1e-06 55.1 113 37.2
Cfa018107 Carpinus fangiana HOM05D000552 ORTHO05D000469 5.4e-06 54.7 44 65.9
MELO3C010643.2 Cucumis melo HOM05D000552 ORTHO05D000469 7.1e-06 54.3 103 38.8
FAN27G2533 Fragaria x ananassa HOM05D000552 ORTHO05D000469 7.1e-06 54.3 45 62.2
MD15G1344200 Malus domestica HOM05D000552 ORTHO05D000469 7.1e-06 54.3 63 49.2
Potri.005G181400 Populus trichocarpa HOM05D000552 ORTHO05D000469 7.1e-06 54.3 115 35.7
PGR042G1592 Punica granatum HOM05D000552 ORTHO05D000469 7.1e-06 54.3 39 69.2
RcHm_v2.0_Chr6g0296431 Rosa chinensis HOM05D000552 ORTHO05D000469 7.1e-06 54.3 45 62.2
Actinidia03420 Actinidia chinensis HOM05D000552 ORTHO05D000469 9.2e-06 53.9 83 41.0
Potri.002G080000 Populus trichocarpa HOM05D000552 ORTHO05D000469 9.2e-06 53.9 104 35.6
TWI34G0407 Tripterygium wilfordii HOM05D000552 ORTHO05D000469 9.2e-06 53.9 60 50.0


User provided reference genes

Program Settings