Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G35330 Arabidopsis lyrata HOM05D015062 ORTHO05D015347 6.7e-134 480.7 249 100.0
AL1G35160 Arabidopsis lyrata HOM05D015062 ORTHO05D015347 4.9e-52 208.8 108 99.1
AT1G21950 Arabidopsis thaliana HOM05D010039 ORTHO05D012172 1.4e-27 127.5 129 56.6
AL1G35320 Arabidopsis lyrata HOM05D010039 ORTHO05D012172 1.8e-25 120.6 129 52.7
Carub.0001s2144 Capsella rubella HOM05D010039 ORTHO05D012172 1.0e-17 94.7 134 47.8
BcaC07g39130 Brassica carinata HOM05D015062 ORTHO05D015347 2.3e-17 93.6 114 50.9
BolC8t49761H Brassica oleracea HOM05D015062 ORTHO05D015347 2.3e-17 93.6 114 50.9
BraA08t34802Z Brassica rapa HOM05D015062 ORTHO05D015347 1.5e-16 90.9 113 50.4
A08p28720 Brassica napus HOM05D015062 ORTHO05D015347 2.0e-16 90.5 113 50.4
C08p21200 Brassica napus HOM05D015062 ORTHO05D015347 2.0e-16 90.5 114 50.0
Carub.0001s2143 Capsella rubella HOM05D010039 ORTHO05D012172 2.8e-15 86.7 124 45.2
BcaB03g11888 Brassica carinata HOM05D015062 ORTHO05D015347 9.1e-14 81.6 78 61.5
AL1G35300 Arabidopsis lyrata HOM05D010039 ORTHO05D012172 3.8e-12 76.3 122 42.6
Carub.0001s2145 Capsella rubella HOM05D010039 ORTHO05D012172 3.8e-12 76.3 139 41.7
AT1G21940 Arabidopsis thaliana HOM05D010039 ORTHO05D012172 1.5e-11 74.3 128 43.0
Thhalv10009993m.g Eutrema salsugineum HOM05D010039 ORTHO05D012172 9.4e-11 71.6 127 40.2
AL1G35310 Arabidopsis lyrata HOM05D010039 ORTHO05D012172 2.0e-08 63.9 127 35.4
BcaC05g26119 Brassica carinata HOM05D010039 ORTHO05D012172 4.1e-06 56.2 121 35.5
BcaC05g26121 Brassica carinata HOM05D010039 ORTHO05D012172 4.1e-06 56.2 121 35.5
BcaNung06771 Brassica carinata HOM05D015062 ORTHO05D015347 4.1e-06 56.2 60 53.3
C05p20990 Brassica napus HOM05D010039 ORTHO05D012172 4.1e-06 56.2 121 35.5
BolC5t30795H Brassica oleracea HOM05D010039 ORTHO05D012172 4.1e-06 56.2 121 35.5
BolC5t30797H Brassica oleracea HOM05D010039 ORTHO05D012172 4.1e-06 56.2 121 35.5
Sp1g19480 Schrenkiella parvula HOM05D010039 ORTHO05D012172 7.0e-06 55.5 121 38.0


User provided reference genes

Program Settings