Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G35310 Arabidopsis lyrata HOM05D010039 ORTHO05D012172 1.1e-63 246.5 124 100.0
AT1G21950 Arabidopsis thaliana HOM05D010039 ORTHO05D012172 3.2e-20 102.1 128 52.3
BraA09t39753Z Brassica rapa HOM05D010039 ORTHO05D012172 3.0e-18 95.5 109 48.6
A09p42790 Brassica napus HOM05D010039 ORTHO05D012172 6.8e-18 94.4 109 48.6
BcaC05g26119 Brassica carinata HOM05D010039 ORTHO05D012172 8.8e-18 94.0 110 49.1
BcaC05g26121 Brassica carinata HOM05D010039 ORTHO05D012172 8.8e-18 94.0 110 49.1
C05p20990 Brassica napus HOM05D010039 ORTHO05D012172 8.8e-18 94.0 110 49.1
BolC5t30795H Brassica oleracea HOM05D010039 ORTHO05D012172 8.8e-18 94.0 110 49.1
BolC5t30797H Brassica oleracea HOM05D010039 ORTHO05D012172 8.8e-18 94.0 110 49.1
BcaB07g32193 Brassica carinata HOM05D010039 ORTHO05D012172 3.7e-16 88.6 109 46.8
Carub.0001s2146 Capsella rubella HOM05D010039 ORTHO05D012172 4.8e-16 88.2 97 50.5
AT1G21940 Arabidopsis thaliana HOM05D010039 ORTHO05D012172 8.3e-16 87.4 52 80.8
AL1G35320 Arabidopsis lyrata HOM05D010039 ORTHO05D012172 3.1e-15 85.5 128 48.4
AL1G35300 Arabidopsis lyrata HOM05D010039 ORTHO05D012172 1.2e-14 83.6 125 43.2
Sp1g19480 Schrenkiella parvula HOM05D010039 ORTHO05D012172 1.6e-14 83.2 122 47.5
Carub.0001s2143 Capsella rubella HOM05D010039 ORTHO05D012172 1.0e-13 80.5 128 43.0
Carub.0001s2144 Capsella rubella HOM05D010039 ORTHO05D012172 2.2e-13 79.3 123 41.5
Carub.0001s2145 Capsella rubella HOM05D010039 ORTHO05D012172 1.9e-12 76.3 137 42.3
Thhalv10009993m.g Eutrema salsugineum HOM05D010039 ORTHO05D012172 5.5e-12 74.7 119 40.3
BcaB07g32194 Brassica carinata HOM05D010039 ORTHO05D012172 3.0e-10 68.9 108 40.7
AL1G35330 Arabidopsis lyrata HOM05D015062 ORTHO05D015347 3.4e-09 65.5 127 35.4
A09p42780 Brassica napus HOM05D000297 ORTHO05D000193 1.3e-08 63.5 109 41.3
BraA09t39752Z Brassica rapa HOM05D000297 ORTHO05D000193 3.1e-07 58.9 110 38.2
BcaB07g32191 Brassica carinata HOM05D010039 ORTHO05D012172 5.9e-06 54.7 108 36.1


User provided reference genes

Program Settings