Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G35280 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 2.7e-51 204.9 96 100.0
AL1G35260 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 2.6e-49 198.4 96 96.9
AL1G35140 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 6.3e-48 193.7 96 94.8
AT1G21928 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.3e-34 148.7 99 72.7
AT1G21925 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.0e-34 147.9 99 71.7
CARHR022290 Cardamine hirsuta HOM05D006717 ORTHO05D008139 4.1e-31 137.9 92 69.6
Thhalv10009497m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 1.2e-27 126.3 92 62.0
Thhalv10009676m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 4.4e-25 117.9 97 53.6
CARHR022300 Cardamine hirsuta HOM05D006717 ORTHO05D008139 7.5e-25 117.1 92 62.0
AL1G35030 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.3e-24 116.3 87 54.0
Thhalv10009885m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 4.9e-24 114.4 94 53.2
AL1G35270 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.6e-22 109.4 79 74.7
Carub.0001s2141 Capsella rubella HOM05D006717 ORTHO05D008139 2.1e-22 109.0 91 60.4
AT1G34792 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 7.8e-22 107.1 87 50.6
AT1G34800 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 7.8e-22 107.1 87 50.6
AT1G34805 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 7.8e-22 107.1 87 50.6
AT1G34820 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 7.8e-22 107.1 87 50.6
AT1G34825 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 7.8e-22 107.1 87 50.6
Thhalv10009544m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 7.8e-22 107.1 80 57.5
AT1G21835 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 3.0e-21 105.1 87 49.4
AT1G34795 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 8.6e-21 103.6 87 48.3
AT1G34810 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 8.6e-21 103.6 87 48.3
AT1G34815 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 8.6e-21 103.6 87 48.3
AT1G34830 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 8.6e-21 103.6 87 48.3
AT1G34860 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.9e-20 102.4 87 49.4
Carub.0001s2131 Capsella rubella HOM05D006717 ORTHO05D008139 4.3e-20 101.3 97 52.6
Aa31LG7G5910 Aethionema arabicum HOM05D006717 ORTHO05D008139 1.2e-19 99.8 90 54.4
AT1G34930 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.1e-19 99.0 87 47.1
CARHR022280 Cardamine hirsuta HOM05D006717 ORTHO05D008139 2.8e-19 98.6 94 47.9
AL1G35130 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 8.1e-19 97.1 96 52.1
Carub.0005s1133 Capsella rubella HOM05D006717 ORTHO05D008139 1.4e-18 96.3 78 56.4
CARHR022330 Cardamine hirsuta HOM05D006717 ORTHO05D008139 1.4e-18 96.3 81 53.1
Thhalv10009375m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 1.4e-18 96.3 94 47.9
CARHR031850 Cardamine hirsuta HOM05D006717 ORTHO05D008139 1.8e-18 95.9 78 53.8
Thhalv10023052m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 2.3e-18 95.5 93 50.5
AT1G35035 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.0e-18 94.7 87 44.8
CARHR022850 Cardamine hirsuta HOM05D006717 ORTHO05D008139 4.0e-18 94.7 94 45.7
CARHR176330 Cardamine hirsuta HOM05D006717 ORTHO05D008139 4.0e-18 94.7 94 47.9
CARHR022210 Cardamine hirsuta HOM05D006717 ORTHO05D008139 1.2e-17 93.2 95 47.4
Carub.0001s2130 Capsella rubella HOM05D006717 ORTHO05D008139 1.5e-17 92.8 78 56.4
BraA09t38826Z Brassica rapa HOM05D006717 ORTHO05D008139 1.3e-16 89.7 79 49.4
BraA09t38828Z Brassica rapa HOM05D006717 ORTHO05D008139 3.7e-16 88.2 79 49.4
AL2G18250 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 4.9e-16 87.8 87 48.3
AT1G21866 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.9e-16 87.8 98 46.9
AT1G34840 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 6.4e-16 87.4 87 42.5
AT1G34850 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 6.4e-16 87.4 87 42.5
AT1G21864 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.1e-15 86.7 98 45.9
BraA09t38825Z Brassica rapa HOM05D006717 ORTHO05D008139 1.1e-15 86.7 79 49.4
BraA09t38827Z Brassica rapa HOM05D006717 ORTHO05D008139 1.4e-15 86.3 78 48.7
Carub.0001s2140 Capsella rubella HOM05D006717 ORTHO05D008139 1.4e-15 86.3 99 43.4
CARHR213610 Cardamine hirsuta HOM05D006717 ORTHO05D008139 1.4e-15 86.3 97 44.3
BolC6t36416H Brassica oleracea HOM05D006717 ORTHO05D008139 1.9e-15 85.9 78 48.7
A09p33030 Brassica napus HOM05D006717 ORTHO05D008139 3.2e-15 85.1 78 47.4
BraA09t38844Z Brassica rapa HOM05D006717 ORTHO05D008139 3.2e-15 85.1 78 47.4
A09p32990 Brassica napus HOM05D006717 ORTHO05D008139 4.1e-15 84.7 78 47.4
A09p33020 Brassica napus HOM05D006717 ORTHO05D008139 4.1e-15 84.7 78 47.4
BraA09t38839Z Brassica rapa HOM05D006717 ORTHO05D008139 4.1e-15 84.7 78 47.4
BraA09t38843Z Brassica rapa HOM05D006717 ORTHO05D008139 4.1e-15 84.7 78 47.4
BraA06t26629Z Brassica rapa HOM05D006717 ORTHO05D008139 7.1e-15 84.0 78 50.0
Carub.0001s2128 Capsella rubella HOM05D006717 ORTHO05D008139 2.7e-14 82.0 98 43.9
Thhalv10022969m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 3.5e-14 81.6 97 44.3
A09p33000 Brassica napus HOM05D006717 ORTHO05D008139 4.6e-14 81.3 78 46.2
BraA09t38841Z Brassica rapa HOM05D006717 ORTHO05D008139 4.6e-14 81.3 78 46.2
Carub.0002s0633 Capsella rubella HOM05D006717 ORTHO05D008139 7.8e-14 80.5 78 47.4
AL1G35060 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.0e-13 80.1 96 46.9
A06p17920 Brassica napus HOM05D006717 ORTHO05D008139 3.0e-13 78.6 99 42.4
BraA06t24882Z Brassica rapa HOM05D006717 ORTHO05D008139 3.0e-13 78.6 99 42.4
AT1G58248 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 3.9e-13 78.2 78 46.2
BolC1t05874H Brassica oleracea HOM05D006717 ORTHO05D008139 3.9e-13 78.2 97 43.3
BolC1t05876H Brassica oleracea HOM05D006717 ORTHO05D008139 3.9e-13 78.2 97 43.3
BcaB07g32182 Brassica carinata HOM05D006717 ORTHO05D008139 6.6e-13 77.4 59 54.2
C05p20820 Brassica napus HOM05D006717 ORTHO05D008139 8.6e-13 77.0 80 45.0
BolC5t30781H Brassica oleracea HOM05D006717 ORTHO05D008139 8.6e-13 77.0 80 45.0
BolC3t17915H Brassica oleracea HOM05D006717 ORTHO05D008139 1.1e-12 76.6 97 42.3
BolC5t30782H Brassica oleracea HOM05D006717 ORTHO05D008139 1.5e-12 76.3 97 42.3
AT5G34828 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.9e-12 75.9 87 42.5
A05p20110 Brassica napus HOM05D006717 ORTHO05D008139 2.5e-12 75.5 90 40.0
BraA01t02119Z Brassica rapa HOM05D006717 ORTHO05D008139 2.5e-12 75.5 93 43.0
AL2G18240 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 3.3e-12 75.1 87 41.4
AT5G38378 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 3.3e-12 75.1 90 43.3
Carub.0001s2150 Capsella rubella HOM05D006717 ORTHO05D008139 3.3e-12 75.1 55 63.6
AL2G18220 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 4.3e-12 74.7 87 41.4
AT1G58245 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.3e-12 74.7 73 46.6
AT5G36720 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 5.6e-12 74.3 90 42.2
AT5G36805 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 5.6e-12 74.3 90 42.2
BraA10t42559Z Brassica rapa HOM05D006717 ORTHO05D008139 5.6e-12 74.3 97 41.2
AT1G58242 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 9.6e-12 73.6 87 40.2
BraA09t38840Z Brassica rapa HOM05D006717 ORTHO05D008139 1.2e-11 73.2 65 49.2
Thhalv10009517m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 1.6e-11 72.8 96 40.6
AT3G24465 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.8e-11 72.0 78 44.9
A05p37210 Brassica napus HOM05D006717 ORTHO05D008139 1.1e-10 70.1 65 49.2
A07p14420 Brassica napus HOM05D006717 ORTHO05D008139 1.1e-10 70.1 62 51.6
Thhalv10009471m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 1.4e-10 69.7 65 47.7
Aa31LG7G10650 Aethionema arabicum HOM05D006717 ORTHO05D008139 3.1e-10 68.6 60 50.0
Thhalv10027249m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 4.0e-10 68.2 102 40.2
A07p14390 Brassica napus HOM05D006717 ORTHO05D008139 6.8e-10 67.4 63 47.6
BraA07t29193Z Brassica rapa HOM05D006717 ORTHO05D008139 6.8e-10 67.4 63 47.6
A07p14400 Brassica napus HOM05D006717 ORTHO05D008139 2.6e-09 65.5 55 52.7
A07p14410 Brassica napus HOM05D006717 ORTHO05D008139 2.6e-09 65.5 63 46.0
BolC7t42647H Brassica oleracea HOM05D006717 ORTHO05D008139 2.6e-09 65.5 73 41.1
BraA07t29194Z Brassica rapa HOM05D006717 ORTHO05D008139 2.6e-09 65.5 55 52.7
Thhalv10027078m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 4.4e-09 64.7 65 46.2
THA.LOC104800186 Tarenaya hassleriana HOM05D006717 ORTHO05D008139 9.9e-09 63.5 78 38.5
BolC5t32089H Brassica oleracea HOM05D006717 ORTHO05D008139 1.7e-08 62.8 64 45.3
A09p33010 Brassica napus HOM05D006717 ORTHO05D008139 2.2e-08 62.4 58 46.6
BolC8t50409H Brassica oleracea HOM05D006717 ORTHO05D008139 4.9e-08 61.2 73 41.1
BraA10t45329Z Brassica rapa HOM05D006717 ORTHO05D008139 3.2e-07 58.5 72 41.7
A10p32920 Brassica napus HOM05D006717 ORTHO05D008139 5.4e-07 57.8 71 42.3
C09p73860 Brassica napus HOM05D006717 ORTHO05D008139 5.4e-07 57.8 93 37.6
C09p73850 Brassica napus HOM05D006717 ORTHO05D008139 1.2e-06 56.6 93 37.6
BolC9t60119H Brassica oleracea HOM05D006717 ORTHO05D008139 1.2e-06 56.6 93 37.6
AL1G65230 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 2.1e-06 55.8 37 59.5
AT1G54775 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 3.5e-06 55.1 63 38.1
BcaC05g26104 Brassica carinata HOM05D006717 ORTHO05D008139 3.5e-06 55.1 46 45.7


User provided reference genes

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