Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G35150 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 2.5e-47 191.8 98 100.0
AL1G35290 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 2.5e-47 191.8 98 100.0
Carub.0001s2142 Capsella rubella HOM05D005828 ORTHO05D006822 3.5e-46 188.0 98 96.9
CARHR022310 Cardamine hirsuta HOM05D005828 ORTHO05D006822 6.9e-42 173.7 98 91.8
AT1G21930 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 5.0e-40 167.5 99 89.9
Aa31LG7G5940 Aethionema arabicum HOM05D005828 ORTHO05D006822 6.5e-40 167.2 98 87.8
BcaC06g34917 Brassica carinata HOM05D005828 ORTHO05D006822 6.5e-40 167.2 94 90.4
C07p21820 Brassica napus HOM05D005828 ORTHO05D006822 6.5e-40 167.2 94 90.4
BolC7t42713H Brassica oleracea HOM05D005828 ORTHO05D006822 6.5e-40 167.2 94 90.4
AT3G42150 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 4.2e-39 164.5 101 87.1
Thhalv10009188m.g Eutrema salsugineum HOM05D005828 ORTHO05D006822 5.5e-39 164.1 96 88.5
Sp1g19470 Schrenkiella parvula HOM05D005828 ORTHO05D006822 7.2e-39 163.7 100 85.0
BcaC05g26118 Brassica carinata HOM05D005828 ORTHO05D006822 2.1e-38 162.2 94 86.2
BcaC05g26120 Brassica carinata HOM05D005828 ORTHO05D006822 2.1e-38 162.2 94 86.2
C05p20980 Brassica napus HOM05D005828 ORTHO05D006822 2.1e-38 162.2 94 86.2
BolC5t30796H Brassica oleracea HOM05D005828 ORTHO05D006822 2.1e-38 162.2 94 86.2
BraA09t39754Z Brassica rapa HOM05D005828 ORTHO05D006822 4.6e-38 161.0 94 85.1
BcaB03g14247 Brassica carinata HOM05D005828 ORTHO05D006822 1.0e-37 159.8 100 84.0
A09p42800 Brassica napus HOM05D005828 ORTHO05D006822 1.8e-37 159.1 94 84.0
BcaB07g32190 Brassica carinata HOM05D005828 ORTHO05D006822 2.3e-37 158.7 95 85.3
BcaB07g32192 Brassica carinata HOM05D005828 ORTHO05D006822 3.3e-36 154.8 87 86.2
A07p14860 Brassica napus HOM05D005828 ORTHO05D006822 9.7e-36 153.3 79 93.7
THA.LOC104810143 Tarenaya hassleriana HOM05D005828 ORTHO05D006822 3.1e-34 148.3 94 81.9
ClCG11G015600 Citrullus lanatus HOM05D005828 ORTHO05D006822 9.1e-34 146.7 95 74.7
Eucgr.F03768 Eucalyptus grandis HOM05D005828 ORTHO05D006822 1.3e-32 142.9 87 80.5
Actinidia23063 Actinidia chinensis HOM05D005828 ORTHO05D006822 1.7e-32 142.5 82 85.4
Glyma.14G162800 Glycine max HOM05D005828 ORTHO05D006822 3.8e-32 141.4 94 75.5
Ca_03724_v3 Cicer arietinum L. HOM05D005828 ORTHO05D006822 5.0e-32 141.0 86 77.9
Glyma.13G081900 Glycine max HOM05D005828 ORTHO05D006822 6.5e-32 140.6 94 75.5
Sed0016516 Sechium edule HOM05D005828 ORTHO05D006822 6.5e-32 140.6 94 73.4
Rhsim10G0081200 Rhododendron simsii HOM05D005828 ORTHO05D006822 8.5e-32 140.2 91 75.8
TPR.G8500 Trifolium pratense HOM05D005828 ORTHO05D006822 1.1e-31 139.8 94 72.3
TWI56G1238 Tripterygium wilfordii HOM05D005828 ORTHO05D006822 1.1e-31 139.8 93 77.4
Dinv40388 Davidia involucrata HOM05D005828 ORTHO05D006822 1.4e-31 139.4 90 76.7
Psat2g078520 Pisum sativum HOM05D005828 ORTHO05D006822 1.4e-31 139.4 93 73.1
Phvul.008G165500 Phaseolus vulgaris HOM05D005828 ORTHO05D006822 1.9e-31 139.0 94 73.4
EL10Ac9g21807 Beta vulgaris HOM05D005828 ORTHO05D006822 3.2e-31 138.3 83 80.7
Nn1g08691 Nelumbo nucifera HOM05D005828 ORTHO05D006822 3.2e-31 138.3 94 74.5
AUR62011415 Chenopodium quinoa HOM05D005828 ORTHO05D006822 5.5e-31 137.5 90 75.6
AUR62022881 Chenopodium quinoa HOM05D005828 ORTHO05D006822 5.5e-31 137.5 90 75.6
Lj1g0023360 Lotus japonicus HOM05D005828 ORTHO05D006822 5.5e-31 137.5 94 73.4
Lalb_Chr04g0253341 Lupinus albus HOM05D005828 ORTHO05D006822 5.5e-31 137.5 94 72.3
Nn7g37602 Nelumbo nucifera HOM05D005828 ORTHO05D006822 5.5e-31 137.5 83 80.7
Peaxi162Scf00241g00022 Petunia axillaris HOM05D005828 ORTHO05D006822 5.5e-31 137.5 94 72.3
Prupe.1G501700 Prunus persica HOM05D005828 ORTHO05D006822 5.5e-31 137.5 90 74.4
GSVIVG01013096001 Vitis vinifera HOM05D005828 ORTHO05D006822 5.5e-31 137.5 82 79.3
Nitab4.5_0010023g0030 Nicotiana tabacum HOM05D005828 ORTHO05D006822 7.2e-31 137.1 82 76.8
CSS0005937 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 1.2e-30 136.3 94 73.4
Sc01g0001360 Simmondsia chinensis HOM05D005828 ORTHO05D006822 1.2e-30 136.3 91 73.6
Ciclev10002958m.g Citrus clementina HOM05D005828 ORTHO05D006822 1.6e-30 136.0 90 76.7
Ah.01g019990 Amaranthus hybridus HOM05D005828 ORTHO05D006822 2.1e-30 135.6 83 79.5
CiPaw.02G169200 Carya illinoinensis HOM05D005828 ORTHO05D006822 2.7e-30 135.2 94 72.3
ECA246G1275 Erigeron canadensis HOM05D005828 ORTHO05D006822 2.7e-30 135.2 87 70.1
MD15G1353400 Malus domestica HOM05D005828 ORTHO05D006822 2.7e-30 135.2 90 73.3
TAR628G1302 Trochodendron aralioides HOM05D005828 ORTHO05D006822 2.7e-30 135.2 92 70.7
CDE01G0185 Ceratophyllum demersum HOM05D005828 ORTHO05D006822 3.6e-30 134.8 83 77.1
Nitab4.5_0002816g0110 Nicotiana tabacum HOM05D005828 ORTHO05D006822 3.6e-30 134.8 82 76.8
PSO170G1674 Papaver somniferum HOM05D005828 ORTHO05D006822 3.6e-30 134.8 98 67.3
Cpa.g.sc70.13 Carica papaya HOM05D005828 ORTHO05D006822 4.7e-30 134.4 93 74.2
FvH4_2g26520 Fragaria vesca HOM05D005828 ORTHO05D006822 4.7e-30 134.4 90 75.6
FAN24G3109 Fragaria x ananassa HOM05D005828 ORTHO05D006822 4.7e-30 134.4 90 75.6
Hma1.2p1_0248F.1_g102070 Hydrangea macrophylla HOM05D005828 ORTHO05D006822 4.7e-30 134.4 86 73.3
Potri.002G086300 Populus trichocarpa HOM05D005828 ORTHO05D006822 4.7e-30 134.4 91 73.6
PGR042G1795 Punica granatum HOM05D005828 ORTHO05D006822 4.7e-30 134.4 90 70.0
Hund16842 Selenicereus undatus HOM05D005828 ORTHO05D006822 4.7e-30 134.4 87 77.0
SGA_v2.0_scaffold52G18982 Striga asiatica HOM05D005828 ORTHO05D006822 4.7e-30 134.4 82 80.5
MBI11_g22242_MAGBIO Magnolia biondii HOM05D005828 ORTHO05D006822 6.1e-30 134.0 90 73.3
Solyc03g093220.3 Solanum lycopersicum HOM05D005828 ORTHO05D006822 6.1e-30 134.0 94 72.3
Sopen03g024020 Solanum pennellii HOM05D005828 ORTHO05D006822 6.1e-30 134.0 94 72.3
arahy.Tifrunner.gnm1.ann1.IQQ61N Arachis hypogaea HOM05D005828 ORTHO05D006822 7.9e-30 133.7 92 72.8
CANSAT64G1100 Cannabis sativa HOM05D005828 ORTHO05D006822 1.4e-29 132.9 82 78.0
Cc10_g15090 Coffea canephora HOM05D005828 ORTHO05D006822 1.4e-29 132.9 90 73.3
Gohir.D06G043500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 1.4e-29 132.9 96 72.9
RcHm_v2.0_Chr6g0295391 Rosa chinensis HOM05D005828 ORTHO05D006822 1.8e-29 132.5 87 77.0
Aqoxy6G00155 Aquilegia oxysepala HOM05D005828 ORTHO05D006822 2.3e-29 132.1 85 74.1
Gohir.A06G042500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 2.3e-29 132.1 94 74.5
Gorai.010G048600 Gossypium raimondii HOM05D005828 ORTHO05D006822 2.3e-29 132.1 94 74.5
HanXRQChr12g0379421 Helianthus annuus HOM05D005828 ORTHO05D006822 2.3e-29 132.1 81 72.8
ATR0021G028 Amborella trichopoda HOM05D005828 ORTHO05D006822 5.1e-29 131.0 92 69.6
FAN15G3227 Fragaria x ananassa HOM05D005828 ORTHO05D006822 5.1e-29 131.0 90 74.4
Oeu050902.1 Olea europaea HOM05D005828 ORTHO05D006822 5.1e-29 131.0 90 72.2
Atru.chr13.1407 Acer truncatum HOM05D005828 ORTHO05D006822 6.7e-29 130.6 86 76.7
Lsat_1_v5_gn_9_83901 Lactuca sativa HOM05D005828 ORTHO05D006822 6.7e-29 130.6 74 81.1
BolC5t30794H Brassica oleracea HOM05D005828 ORTHO05D006822 3.3e-28 128.3 66 93.9
Duzib041G0320 Durio zibethinus HOM05D005828 ORTHO05D006822 3.3e-28 128.3 98 69.4
Migut.K01196 Erythranthe guttata HOM05D005828 ORTHO05D006822 3.3e-28 128.3 83 73.5
Dinv27340 Davidia involucrata HOM05D005828 ORTHO05D006822 4.4e-28 127.9 94 69.1
Medtr5g059050 Medicago truncatula HOM05D005828 ORTHO05D006822 4.4e-28 127.9 95 70.5
Thecc.08G121200 Theobroma cacao HOM05D005828 ORTHO05D006822 4.4e-28 127.9 91 73.6
CAN.G48.25 Capsicum annuum HOM05D005828 ORTHO05D006822 5.7e-28 127.5 82 76.8
Migut.G00970 Erythranthe guttata HOM05D005828 ORTHO05D006822 5.7e-28 127.5 92 66.3
Manes.18G074748 Manihot esculenta HOM05D005828 ORTHO05D006822 5.7e-28 127.5 95 68.4
Migut.C01150 Erythranthe guttata HOM05D005828 ORTHO05D006822 7.4e-28 127.1 92 66.3
QL09p036513 Quercus lobata HOM05D005828 ORTHO05D006822 7.4e-28 127.1 90 71.1
FAN27G1656 Fragaria x ananassa HOM05D005828 ORTHO05D006822 1.3e-27 126.3 98 69.4
Os12g0481200 Oryza sativa ssp. japonica HOM05D005828 ORTHO05D006822 1.3e-27 126.3 85 74.1
RhsimUnG0054200 Rhododendron simsii HOM05D005828 ORTHO05D006822 1.7e-27 125.9 111 61.3
AUR62016643 Chenopodium quinoa HOM05D005828 ORTHO05D006822 2.2e-27 125.6 97 67.0
Duzib093G2142 Durio zibethinus HOM05D005828 ORTHO05D006822 2.2e-27 125.6 94 71.3
BcaC07g42575 Brassica carinata HOM05D005828 ORTHO05D006822 2.8e-27 125.2 90 73.3
CSS0009962 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 1.8e-26 122.5 109 61.5
unitig_22.g6732 Utricularia gibba HOM05D005828 ORTHO05D006822 2.4e-26 122.1 97 61.9
Zm00001eb318220 Zea mays HOM05D005828 ORTHO05D006822 3.1e-26 121.7 88 68.2
HPP92_010723 Vanilla planifolia HOM05D005828 ORTHO05D006822 5.3e-26 120.9 86 69.8
Sabra02G0067700 Salix brachista HOM05D005828 ORTHO05D006822 3.5e-25 118.2 117 57.3
Rhsim02G0128100 Rhododendron simsii HOM05D005828 ORTHO05D006822 1.3e-24 116.3 80 73.8
vmacro15901 Vaccinium macrocarpon HOM05D005828 ORTHO05D006822 2.9e-24 115.2 80 71.2
HPP92_010646 Vanilla planifolia HOM05D005828 ORTHO05D006822 5.0e-24 114.4 86 66.3
CsaV3_4G028420 Cucumis sativus L. HOM05D005828 ORTHO05D006822 8.5e-24 113.6 78 73.1
MELO3C010460.2 Cucumis melo HOM05D005828 ORTHO05D006822 1.1e-23 113.2 79 70.9
PGSC0003DMG400014827 Solanum tuberosum HOM05D005828 ORTHO05D006822 3.2e-23 111.7 78 73.1
DCAR_014107 Daucus carota HOM05D005828 ORTHO05D006822 5.5e-23 110.9 69 78.3
MD08G1168000 Malus domestica HOM05D005828 ORTHO05D006822 9.4e-23 110.2 74 73.0
SalBow1G4500 Salvia bowleyana HOM05D005828 ORTHO05D006822 9.4e-23 110.2 75 74.7
QL09p035324 Quercus lobata HOM05D005828 ORTHO05D006822 2.1e-22 109.0 93 62.4
Haze_00481 Corylus avellana HOM05D005828 ORTHO05D006822 3.6e-22 108.2 77 71.4
PSO528G0081 Papaver somniferum HOM05D005828 ORTHO05D006822 4.7e-22 107.8 81 67.9
DCAR_014096 Daucus carota HOM05D005828 ORTHO05D006822 1.8e-21 105.9 67 74.6
SHI08265 Sapria himalayana HOM05D005828 ORTHO05D006822 3.7e-19 98.2 75 65.3
Medtr5g058700 Medicago truncatula HOM05D005828 ORTHO05D006822 1.2e-14 83.2 95 54.7
Pp3c4_22520 Physcomitrium patens HOM05D005828 ORTHO05D006822 1.2e-14 83.2 70 55.7
Zm00001eb102630 Zea mays HOM05D005828 ORTHO05D006822 1.2e-14 83.2 87 54.0
Lalb_Chr17g0343871 Lupinus albus HOM05D005828 ORTHO05D006822 2.7e-14 82.0 47 80.9
Mapoly0038s0094 Marchantia polymorpha HOM05D005828 ORTHO05D006822 1.0e-13 80.1 64 56.2
SEGI_28823 Sequoiadendron giganteum HOM05D005828 ORTHO05D006822 1.0e-13 80.1 64 65.6
BcaB03g11887 Brassica carinata HOM05D005828 ORTHO05D006822 1.7e-11 72.8 48 75.0
BcaNung06341 Brassica carinata HOM05D005828 ORTHO05D006822 1.7e-11 72.8 48 75.0
BcaNung06770 Brassica carinata HOM05D005828 ORTHO05D006822 1.7e-11 72.8 48 75.0
AagrBONN_evm.TU.Sc2ySwM_368.871 Anthoceros agrestis HOM05D005828 ORTHO05D006822 3.7e-11 71.6 52 65.4
SMO232G0111 Selaginella moellendorffii HOM05D005828 ORTHO05D006822 1.8e-10 69.3 76 48.7
MD03G1196900 Malus domestica HOM05D005828 ORTHO05D006822 2.4e-10 68.9 55 60.0
BcaB01g03422 Brassica carinata HOM05D037851 ORTHO05D006822 5.5e-07 57.8 99 44.4
BcaB02g06981 Brassica carinata HOM05D037851 ORTHO05D006822 5.5e-07 57.8 99 44.4
BcaB02g06986 Brassica carinata HOM05D037851 ORTHO05D006822 5.5e-07 57.8 99 44.4


User provided reference genes

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