Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G34960 Arabidopsis lyrata HOM05D006264 ORTHO05D007739 8.4e-148 526.9 255 100.0
AT1G21760 Arabidopsis thaliana HOM05D006264 ORTHO05D007739 4.8e-143 511.1 255 95.7
Sp1g19320 Schrenkiella parvula HOM05D006264 ORTHO05D007739 8.1e-143 510.4 255 95.3
Thhalv10008543m.g Eutrema salsugineum HOM05D006264 ORTHO05D007739 2.4e-142 508.8 255 94.9
Carub.0001s2122 Capsella rubella HOM05D006264 ORTHO05D007739 9.0e-142 506.9 255 94.1
BcaB07g32175 Brassica carinata HOM05D006264 ORTHO05D007739 1.2e-141 506.5 255 95.3
CARHR022150 Cardamine hirsuta HOM05D006264 ORTHO05D007739 2.6e-141 505.4 255 94.1
BcaC05g26098 Brassica carinata HOM05D006264 ORTHO05D007739 4.9e-140 501.1 255 94.5
Aa31LG7G5740 Aethionema arabicum HOM05D006264 ORTHO05D007739 3.2e-139 498.4 255 93.7
A06p17870 Brassica napus HOM05D006264 ORTHO05D007739 5.4e-139 497.7 271 89.7
BraA06t24877Z Brassica rapa HOM05D006264 ORTHO05D007739 5.4e-139 497.7 271 89.7
BolC5t30776H Brassica oleracea HOM05D006264 ORTHO05D007739 3.5e-138 495.0 268 90.3
C05p20770 Brassica napus HOM05D006264 ORTHO05D007739 7.9e-130 467.2 243 92.2
THA.LOC104801868 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 6.2e-127 457.6 255 85.1
THA.LOC104810199 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 6.2e-127 457.6 255 85.1
Glyma.06G115200 Glycine max HOM05D006264 ORTHO05D007739 2.0e-125 452.6 254 83.1
Gohir.D06G045800 Gossypium hirsutum HOM05D006264 ORTHO05D007739 2.6e-125 452.2 254 83.5
Gorai.010G051000 Gossypium raimondii HOM05D006264 ORTHO05D007739 2.6e-125 452.2 254 83.5
Lj1g0001411 Lotus japonicus HOM05D006264 ORTHO05D007739 2.6e-125 452.2 254 82.7
PGR044G1646 Punica granatum HOM05D006264 ORTHO05D007739 2.6e-125 452.2 254 82.7
Thecc.08G126800 Theobroma cacao HOM05D006264 ORTHO05D007739 2.6e-125 452.2 254 83.5
Ciclev10001823m.g Citrus clementina HOM05D006264 ORTHO05D007739 2.2e-124 449.1 254 81.1
Prupe.1G494700 Prunus persica HOM05D006264 ORTHO05D007739 2.2e-124 449.1 254 82.3
VMungo1309G2910 Vigna mungo HOM05D006264 ORTHO05D007739 2.2e-124 449.1 254 82.7
CAN.G2.26 Capsicum annuum HOM05D006264 ORTHO05D007739 3.8e-124 448.4 254 80.7
PGSC0003DMG400000884 Solanum tuberosum HOM05D006264 ORTHO05D007739 6.5e-124 447.6 254 80.3
COL.COLO4_04990 Corchorus olitorius HOM05D006264 ORTHO05D007739 8.4e-124 447.2 254 83.1
Glyma.04G247500 Glycine max HOM05D006264 ORTHO05D007739 1.4e-123 446.4 255 82.0
QL09p034323 Quercus lobata HOM05D006264 ORTHO05D007739 3.2e-123 445.3 253 80.6
QL09p034368 Quercus lobata HOM05D006264 ORTHO05D007739 3.2e-123 445.3 253 80.6
MELO3C010482.2 Cucumis melo HOM05D006264 ORTHO05D007739 4.2e-123 444.9 254 80.7
Lalb_Chr11g0066051 Lupinus albus HOM05D006264 ORTHO05D007739 4.2e-123 444.9 253 81.4
Actinidia29470 Actinidia chinensis HOM05D006264 ORTHO05D007739 5.5e-123 444.5 254 80.3
arahy.Tifrunner.gnm1.ann1.YYE7NP Arachis hypogaea HOM05D006264 ORTHO05D007739 5.5e-123 444.5 254 81.1
MSTRG.1441 Avicennia marina HOM05D006264 ORTHO05D007739 9.3e-123 443.7 254 81.1
CSS0035031 Camellia sinensis var. sinensis HOM05D006264 ORTHO05D007739 9.3e-123 443.7 254 81.5
MD15G1347000 Malus domestica HOM05D006264 ORTHO05D007739 1.2e-122 443.4 254 81.1
Phvul.009G127300 Phaseolus vulgaris HOM05D006264 ORTHO05D007739 1.2e-122 443.4 254 81.1
Sed0004807 Sechium edule HOM05D006264 ORTHO05D007739 1.2e-122 443.4 254 79.9
Ca_27657_v3 Cicer arietinum L. HOM05D006264 ORTHO05D007739 1.6e-122 443.0 255 81.2
Lalb_Chr08g0241301 Lupinus albus HOM05D006264 ORTHO05D007739 1.6e-122 443.0 254 81.5
Solyc11g012830.3 Solanum lycopersicum HOM05D006264 ORTHO05D007739 1.6e-122 443.0 254 79.5
arahy.Tifrunner.gnm1.ann1.W8H4W4 Arachis hypogaea HOM05D006264 ORTHO05D007739 2.7e-122 442.2 254 80.7
Hund17298 Selenicereus undatus HOM05D006264 ORTHO05D007739 2.7e-122 442.2 251 82.5
Haze_00430 Corylus avellana HOM05D006264 ORTHO05D007739 3.5e-122 441.8 267 78.7
CsaV3_4G028200 Cucumis sativus L. HOM05D006264 ORTHO05D007739 7.9e-122 440.7 254 79.9
Nn1g08814 Nelumbo nucifera HOM05D006264 ORTHO05D007739 7.9e-122 440.7 254 79.9
Sc02g0005000 Simmondsia chinensis HOM05D006264 ORTHO05D007739 1.3e-121 439.9 251 79.3
Eucgr.F04347 Eucalyptus grandis HOM05D006264 ORTHO05D007739 3.0e-121 438.7 254 79.9
Medtr3g088580 Medicago truncatula HOM05D006264 ORTHO05D007739 3.9e-121 438.3 254 78.7
Nitab4.5_0001996g0020 Nicotiana tabacum HOM05D006264 ORTHO05D007739 3.9e-121 438.3 254 78.7
CANSAT11G2315 Cannabis sativa HOM05D006264 ORTHO05D007739 5.1e-121 438.0 254 79.9
Lj4C628G13 Lonicera japonica HOM05D006264 ORTHO05D007739 5.1e-121 438.0 255 80.8
TAR381G1225 Trochodendron aralioides HOM05D006264 ORTHO05D007739 6.7e-121 437.6 254 79.1
Dinv27304 Davidia involucrata HOM05D006264 ORTHO05D007739 8.7e-121 437.2 254 80.3
EL10Ac1g01023 Beta vulgaris HOM05D006264 ORTHO05D007739 1.1e-120 436.8 253 80.2
Oeu040415.1 Olea europaea HOM05D006264 ORTHO05D007739 1.5e-120 436.4 254 80.3
Cc10_g12020 Coffea canephora HOM05D006264 ORTHO05D007739 2.5e-120 435.6 254 79.1
FAN24G2929 Fragaria x ananassa HOM05D006264 ORTHO05D007739 4.3e-120 434.9 255 79.2
RcHm_v2.0_Chr6g0295971 Rosa chinensis HOM05D006264 ORTHO05D007739 4.3e-120 434.9 254 78.7
FAN15G0088 Fragaria x ananassa HOM05D006264 ORTHO05D007739 5.7e-120 434.5 255 79.2
Migut.C01127 Erythranthe guttata HOM05D006264 ORTHO05D007739 7.4e-120 434.1 253 79.8
FAN20G0424 Fragaria x ananassa HOM05D006264 ORTHO05D007739 4.8e-119 431.4 255 78.8
TAR625G1219 Trochodendron aralioides HOM05D006264 ORTHO05D007739 1.1e-118 430.3 254 77.6
TWI60G1034 Tripterygium wilfordii HOM05D006264 ORTHO05D007739 5.3e-118 427.9 254 76.4
PSO170G1538 Papaver somniferum HOM05D006264 ORTHO05D007739 6.9e-118 427.6 253 78.3
PSO063G0125 Papaver somniferum HOM05D006264 ORTHO05D007739 2.0e-117 426.0 254 77.6
PSO528G0109 Papaver somniferum HOM05D006264 ORTHO05D007739 3.4e-117 425.2 254 76.8
AUR62019071 Chenopodium quinoa HOM05D006264 ORTHO05D007739 1.3e-116 423.3 250 78.8
AUR62014328 Chenopodium quinoa HOM05D006264 ORTHO05D007739 2.9e-116 422.2 250 78.4
MBI16_g07653_MAGBIO Magnolia biondii HOM05D006264 ORTHO05D007739 3.8e-116 421.8 254 75.6
HanXRQChr05g0151071 Helianthus annuus HOM05D006264 ORTHO05D007739 5.5e-115 417.9 254 74.0
SGA_v2.0_scaffold24G10459 Striga asiatica HOM05D006264 ORTHO05D007739 7.2e-115 417.5 254 78.7
TPR.G13464 Trifolium pratense HOM05D006264 ORTHO05D007739 7.2e-115 417.5 254 76.8
Aqoxy6G00234 Aquilegia oxysepala HOM05D006264 ORTHO05D007739 3.6e-114 415.2 254 74.4
vmacro00839 Vaccinium macrocarpon HOM05D006264 ORTHO05D007739 3.6e-114 415.2 254 77.2
Peaxi162Scf00914g00315 Petunia axillaris HOM05D006264 ORTHO05D007739 6.1e-114 414.5 236 78.8
ClCG11G015780 Citrullus lanatus HOM05D006264 ORTHO05D007739 7.9e-114 414.1 234 80.8
Rhsim11G0069200 Rhododendron simsii HOM05D006264 ORTHO05D007739 1.4e-113 413.3 257 76.3
FvH4_2g27090 Fragaria vesca HOM05D006264 ORTHO05D007739 1.8e-113 412.9 235 80.4
ATR0584G291 Amborella trichopoda HOM05D006264 ORTHO05D007739 6.7e-113 411.0 254 72.8
arahy.Tifrunner.gnm1.ann1.9W7Z3M Arachis hypogaea HOM05D006264 ORTHO05D007739 6.7e-113 411.0 262 74.8
CiPaw.05G220800 Carya illinoinensis HOM05D006264 ORTHO05D007739 3.7e-111 405.2 254 74.8
Duzib093G0816 Durio zibethinus HOM05D006264 ORTHO05D007739 3.7e-111 405.2 254 76.8
Lsat_1_v5_gn_6_112861 Lactuca sativa HOM05D006264 ORTHO05D007739 2.4e-110 402.5 252 72.2
DCAR_028205 Daucus carota HOM05D006264 ORTHO05D007739 3.4e-109 398.7 254 72.8
CDE02G1850 Ceratophyllum demersum HOM05D006264 ORTHO05D007739 7.2e-107 391.0 254 68.5
Manes.02G164400 Manihot esculenta HOM05D006264 ORTHO05D007739 1.5e-104 383.3 254 70.9
HPP92_004401 Vanilla planifolia HOM05D006264 ORTHO05D007739 2.0e-104 382.9 254 67.3
Nitab4.5_0001803g0010 Nicotiana tabacum HOM05D006264 ORTHO05D007739 3.3e-104 382.1 238 75.6
HPP92_027807 Vanilla planifolia HOM05D006264 ORTHO05D007739 3.3e-104 382.1 254 66.9
Potri.005G178600 Populus trichocarpa HOM05D006264 ORTHO05D007739 3.1e-102 375.6 254 70.9
SMO347G0097 Selaginella moellendorffii HOM05D006264 ORTHO05D007739 2.1e-98 362.8 254 66.5
Potri.002G082500 Populus trichocarpa HOM05D006264 ORTHO05D007739 4.7e-98 361.7 254 68.1
Atru.chr13.1491 Acer truncatum HOM05D006264 ORTHO05D007739 2.6e-96 355.9 220 77.7
unitig_748.g7689 Utricularia gibba HOM05D006264 ORTHO05D007739 4.4e-96 355.1 219 76.3
Zm00001eb422580 Zea mays HOM05D006264 ORTHO05D007739 2.2e-95 352.8 254 62.6
Pp3c3_38060 Physcomitrium patens HOM05D006264 ORTHO05D007739 2.8e-95 352.4 254 65.0
GSVIVG01008855001 Vitis vinifera HOM05D006264 ORTHO05D007739 1.1e-91 340.5 254 66.1
Sopen11g007570 Solanum pennellii HOM05D006264 ORTHO05D007739 4.7e-90 335.1 200 79.0
AagrBONN_evm.TU.Sc2ySwM_117.473 Anthoceros agrestis HOM05D006264 ORTHO05D007739 2.6e-88 329.3 253 58.1
Mapoly0151s0012 Marchantia polymorpha HOM05D006264 ORTHO05D007739 6.3e-87 324.7 255 59.6
ECA246G2185 Erigeron canadensis HOM05D006264 ORTHO05D007739 8.3e-87 324.3 202 75.2
Sabra02G0064700 Salix brachista HOM05D006264 ORTHO05D007739 9.8e-80 300.8 254 59.1
Gohir.A06G045300 Gossypium hirsutum HOM05D006264 ORTHO05D007739 3.1e-78 295.8 165 80.0
CBR_g39544 Chara braunii HOM05D006264 ORTHO05D007739 2.2e-71 273.1 266 51.1
Cpa.g.c35582 Carica papaya HOM05D006264 ORTHO05D007739 2.3e-60 236.5 146 79.5
Psat5g086240 Pisum sativum HOM05D006264 ORTHO05D007739 9.2e-54 214.5 134 79.1
Psat5g086280 Pisum sativum HOM05D006264 ORTHO05D007739 1.3e-44 184.1 92 81.5
MCO07G330 Micromonas commoda HOM05D006264 ORTHO05D007739 3.2e-38 162.9 260 38.8
PRCOL_00004228 Prasinoderma coloniale HOM05D006264 ORTHO05D007739 2.7e-37 159.8 228 37.7
Cre06.g254450 Chlamydomonas reinhardtii HOM05D006264 ORTHO05D007739 1.9e-35 153.7 295 34.2
Cpa.g.c45459 Carica papaya HOM05D006264 ORTHO05D007739 3.5e-29 132.9 77 81.8
SEGI_39749 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 5.1e-28 129.0 111 61.3
Zm00001eb082740 Zea mays HOM05D006264 ORTHO05D007739 1.6e-26 124.0 134 50.7
arahy.Tifrunner.gnm1.ann1.XAL0CN Arachis hypogaea HOM05D003584 ORTHO05D004148 4.0e-25 119.4 65 72.3
Os04g0431200 Oryza sativa ssp. japonica HOM05D006264 ORTHO05D007739 3.4e-24 116.3 67 68.7
SEGI_38549 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 2.2e-23 113.6 66 69.7
Migut.B01582 Erythranthe guttata HOM05D006264 ORTHO05D007739 1.9e-19 100.5 58 77.6
Cpa.g.sc418.8 Carica papaya HOM05D006264 ORTHO05D007739 2.1e-13 80.5 39 79.5
Actinidia03465 Actinidia chinensis HOM05D006264 ORTHO05D007739 1.2e-08 64.7 36 75.0
Rhsim11G0069000 Rhododendron simsii HOM05D006264 ORTHO05D007739 3.4e-08 63.2 61 54.1
Rhsim11G0068700 Rhododendron simsii HOM05D006264 ORTHO05D007739 2.5e-06 57.0 112 42.0


User provided reference genes

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