Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G34900 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 1.8e-109 399.4 229 100.0
Carub.0001s2117 Capsella rubella HOM05D005772 ORTHO05D006468 3.8e-99 365.2 230 90.9
AT1G21722 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 1.0e-96 357.1 226 91.6
Thhalv10008678m.g Eutrema salsugineum HOM05D005772 ORTHO05D006468 1.5e-87 326.6 230 78.7
BcaC05g26092 Brassica carinata HOM05D005772 ORTHO05D006468 7.2e-82 307.8 228 73.7
A06p17810 Brassica napus HOM05D005772 ORTHO05D006468 8.8e-80 300.8 225 79.6
A07p14940 Brassica napus HOM05D005772 ORTHO05D006468 2.6e-76 289.3 226 68.1
CARHR022100 Cardamine hirsuta HOM05D005772 ORTHO05D006468 1.0e-75 287.3 228 77.2
BcaB07g32170 Brassica carinata HOM05D005772 ORTHO05D006468 6.8e-64 248.1 190 80.5
C05p20700 Brassica napus HOM05D005772 ORTHO05D006468 1.2e-63 247.3 220 69.5
Aa31LG7G5690 Aethionema arabicum HOM05D002121 ORTHO05D004000 1.7e-59 233.4 227 69.6
Thecc.08G129200 Theobroma cacao HOM05D005772 ORTHO05D006468 5.0e-51 205.3 238 47.1
THA.LOC104800210 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 9.5e-50 201.1 221 52.0
Duzib093G1216 Durio zibethinus HOM05D005772 ORTHO05D006468 1.7e-43 180.3 239 44.4
Gohir.A05G237000 Gossypium hirsutum HOM05D005772 ORTHO05D006468 5.6e-42 175.3 238 45.0
Gohir.D05G239100 Gossypium hirsutum HOM05D005772 ORTHO05D006468 1.6e-41 173.7 238 41.2
Gorai.009G247900 Gossypium raimondii HOM05D005772 ORTHO05D006468 1.6e-41 173.7 238 43.7
Ciclev10003748m.g Citrus clementina HOM05D005772 ORTHO05D006468 6.8e-40 168.3 243 42.8
PGR042G3290 Punica granatum HOM05D005772 ORTHO05D006468 1.5e-39 167.2 227 43.2
Potri.005G180400 Populus trichocarpa HOM05D005772 ORTHO05D006468 2.0e-39 166.8 230 43.5
QL09p033796 Quercus lobata HOM05D005772 ORTHO05D006468 2.9e-38 162.9 241 46.1
Cpa.g.sc64.117 Carica papaya HOM05D005772 ORTHO05D006468 3.7e-38 162.5 232 42.2
CiPaw.16G025800 Carya illinoinensis HOM05D005772 ORTHO05D006468 3.7e-38 162.5 238 42.4
Manes.02G166200 Manihot esculenta HOM05D005772 ORTHO05D006468 1.2e-36 157.5 232 41.4
Actinidia15231 Actinidia chinensis HOM05D005772 ORTHO05D006468 3.5e-36 156.0 231 41.6
Hma1.2p1_0612F.1_g188830 Hydrangea macrophylla HOM05D005772 ORTHO05D006468 1.7e-35 153.7 235 40.4
TAR628G1655 Trochodendron aralioides HOM05D005772 ORTHO05D006468 5.6e-34 148.7 239 37.7
TPR.G21059 Trifolium pratense HOM05D005772 ORTHO05D006468 9.5e-34 147.9 249 37.8
Actinidia21305 Actinidia chinensis HOM05D005772 ORTHO05D006468 8.0e-33 144.8 231 39.4
ClCG11G015880 Citrullus lanatus HOM05D005772 ORTHO05D006468 1.5e-31 140.6 118 57.6
Cc10_g12210 Coffea canephora HOM05D005772 ORTHO05D006468 1.5e-31 140.6 237 47.3
VMungo1309G2764 Vigna mungo HOM05D005772 ORTHO05D006468 1.5e-31 140.6 240 35.4
Phvul.007G102200 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 7.5e-31 138.3 249 34.9
SGA_v2.0_scaffold52G18944 Striga asiatica HOM05D005772 ORTHO05D006468 2.2e-30 136.7 241 38.2
Nitab4.5_0000111g0180 Nicotiana tabacum HOM05D005772 ORTHO05D006468 2.9e-30 136.3 230 37.4
Nn5g28367 Nelumbo nucifera HOM05D005772 ORTHO05D006468 3.7e-30 136.0 239 36.0
Psat5g087080 Pisum sativum HOM05D005772 ORTHO05D006468 3.7e-30 136.0 247 37.2
Migut.C01111 Erythranthe guttata HOM05D005772 ORTHO05D006468 2.4e-29 133.3 231 39.0
MBI06_g44579_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 2.4e-29 133.3 236 37.3
Glyma.04G249200 Glycine max HOM05D005772 ORTHO05D006468 3.2e-29 132.9 251 36.7
CsaV3_4G028090 Cucumis sativus L. HOM05D005772 ORTHO05D006468 4.1e-29 132.5 189 41.3
MELO3C010502.2 Cucumis melo HOM05D005772 ORTHO05D006468 7.1e-29 131.7 235 39.6
Lj1g0001548 Lotus japonicus HOM05D005772 ORTHO05D006468 1.6e-28 130.6 245 38.4
Migut.E00857 Erythranthe guttata HOM05D005772 ORTHO05D006468 2.1e-28 130.2 238 37.4
Migut.E01717 Erythranthe guttata HOM05D005772 ORTHO05D006468 2.7e-28 129.8 238 37.0
Lalb_Chr08g0241421 Lupinus albus HOM05D005772 ORTHO05D006468 3.5e-28 129.4 248 35.1
GSVIVG01008837001 Vitis vinifera HOM05D005772 ORTHO05D006468 3.5e-28 129.4 118 55.1
DCAR_003562 Daucus carota HOM05D005772 ORTHO05D006468 6.0e-28 128.6 226 47.8
arahy.Tifrunner.gnm1.ann1.AWF3QX Arachis hypogaea HOM05D005772 ORTHO05D006468 1.7e-27 127.1 225 36.4
Phvul.009G125600 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 1.5e-26 124.0 187 36.9
CANSAT64G1440 Cannabis sativa HOM05D005772 ORTHO05D006468 1.2e-25 120.9 242 37.2
arahy.Tifrunner.gnm1.ann1.B1JKF4 Arachis hypogaea HOM05D005772 ORTHO05D006468 2.8e-25 119.8 207 35.3
MSTRG.1426 Avicennia marina HOM05D005772 ORTHO05D006468 8.1e-25 118.2 241 37.3
Glyma.06G113802 Glycine max HOM05D005772 ORTHO05D006468 8.1e-25 118.2 280 34.6
Dinv27285 Davidia involucrata HOM05D005772 ORTHO05D006468 6.8e-24 115.2 226 36.7
BraA07t29240Z Brassica rapa HOM05D005772 ORTHO05D006468 2.0e-23 113.6 227 40.1
Aqoxy6G00258 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 4.4e-23 112.5 214 34.1
BolC5t30769H Brassica oleracea HOM05D005772 ORTHO05D006468 1.3e-22 110.9 229 40.6
CSS0028957 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 2.9e-22 109.8 207 35.7
Nitab4.5_0004208g0030 Nicotiana tabacum HOM05D005772 ORTHO05D006468 2.9e-22 109.8 223 33.6
BcaB03g14256 Brassica carinata HOM05D002121 ORTHO05D004000 1.2e-20 104.4 125 51.2
Oeu009481.1 Olea europaea HOM05D005772 ORTHO05D006468 1.2e-20 104.4 239 42.7
SGA_v2.0_scaffold52G18951 Striga asiatica HOM05D005772 ORTHO05D006468 2.3e-19 100.1 212 34.9
Solyc11g017475.1 Solanum lycopersicum HOM05D005772 ORTHO05D006468 1.9e-18 97.1 223 30.9
SalBow5G3743 Salvia bowleyana HOM05D005772 ORTHO05D006468 2.5e-18 96.7 238 41.2
Lj4A634T17 Lonicera japonica HOM05D005772 ORTHO05D006468 5.6e-18 95.5 192 33.9
TWI18G0423 Tripterygium wilfordii HOM05D005772 ORTHO05D006468 2.1e-17 93.6 118 39.8
QL06p046996 Quercus lobata HOM05D005772 ORTHO05D006468 6.2e-17 92.0 118 38.1
SalBow5G0344 Salvia bowleyana HOM05D005772 ORTHO05D006468 6.2e-17 92.0 238 42.0
Ciclev10013938m.g Citrus clementina HOM05D005772 ORTHO05D006468 8.1e-17 91.7 118 39.8
Ciclev10013939m.g Citrus clementina HOM05D005772 ORTHO05D006468 8.1e-17 91.7 118 39.8
Ciclev10013941m.g Citrus clementina HOM05D005772 ORTHO05D006468 1.1e-16 91.3 118 39.8
SGA_v2.0_scaffold24G10436 Striga asiatica HOM05D002121 ORTHO05D004000 1.8e-16 90.5 209 34.0
Cfa003428 Carpinus fangiana HOM05D005772 ORTHO05D006468 1.2e-15 87.8 118 37.3
Atru.chr13.1514 Acer truncatum HOM05D005772 ORTHO05D006468 1.5e-15 87.4 170 35.9
Potri.007G001650 Populus trichocarpa HOM05D005772 ORTHO05D006468 2.6e-15 86.7 118 38.1
CANSAT01G3073 Cannabis sativa HOM05D005772 ORTHO05D006468 3.4e-15 86.3 118 35.6
Nn8g41076 Nelumbo nucifera HOM05D005772 ORTHO05D006468 3.4e-15 86.3 118 36.4
Sabra07G0001200 Salix brachista HOM05D005772 ORTHO05D006468 4.4e-15 85.9 118 39.0
GSVIVG01029533001 Vitis vinifera HOM05D005956 ORTHO05D007197 1.3e-14 84.3 118 36.4
CiPaw.01G207400 Carya illinoinensis HOM05D005772 ORTHO05D006468 2.2e-14 83.6 118 36.4
PGR031G3661 Punica granatum HOM05D005772 ORTHO05D006468 2.2e-14 83.6 228 28.5
Thecc.06G054300 Theobroma cacao HOM05D005772 ORTHO05D006468 3.8e-14 82.8 118 36.4
CSS0023973 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 8.4e-14 81.6 118 35.6
HPP92_009982 Vanilla planifolia HOM05D005772 ORTHO05D006468 8.4e-14 81.6 187 27.8
CiPaw.02G128300 Carya illinoinensis HOM05D005772 ORTHO05D006468 1.1e-13 81.3 227 28.6
Potri.007G001400 Populus trichocarpa HOM05D005772 ORTHO05D006468 1.1e-13 81.3 240 30.0
Prupe.3G025100 Prunus persica HOM05D005772 ORTHO05D006468 1.4e-13 80.9 228 31.6
MBI06_g27497_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 1.9e-13 80.5 118 35.6
Rhsim08G0251400 Rhododendron simsii HOM05D000927 ORTHO05D000850 2.4e-13 80.1 118 33.9
PSO170G5960 Papaver somniferum HOM05D005772 ORTHO05D006468 3.2e-13 79.7 124 36.3
unitig_22.g6227 Utricularia gibba HOM05D005772 ORTHO05D006468 7.1e-13 78.6 66 51.5
RcHm_v2.0_Chr2g0149081 Rosa chinensis HOM05D005772 ORTHO05D006468 9.3e-13 78.2 118 36.4
PSO063G1689 Papaver somniferum HOM05D005772 ORTHO05D006468 2.1e-12 77.0 118 33.1
FAN02G1413 Fragaria x ananassa HOM05D005772 ORTHO05D006468 4.6e-12 75.9 236 28.0
Carub.0002s2577 Capsella rubella HOM05D005772 ORTHO05D006468 7.8e-12 75.1 118 34.7
TAR625G1307 Trochodendron aralioides HOM05D005772 ORTHO05D006468 7.8e-12 75.1 172 30.2
Aqoxy2G03016 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 1.0e-11 74.7 239 26.8
AT1G78922 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 1.0e-11 74.7 118 33.1
Lj3g0026748 Lotus japonicus HOM05D005772 ORTHO05D006468 1.3e-11 74.3 118 33.1
CARHR072530 Cardamine hirsuta HOM05D005772 ORTHO05D006468 2.3e-11 73.6 118 34.7
MD04G1024200 Malus domestica HOM05D005772 ORTHO05D006468 8.7e-11 71.6 232 30.2
AL2G39360 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 1.5e-10 70.9 102 34.3
BcaB02g07187 Brassica carinata HOM05D005772 ORTHO05D006468 1.5e-10 70.9 118 33.9
BcaC08g45402 Brassica carinata HOM05D007236 ORTHO05D009150 1.5e-10 70.9 118 33.9
C06p30330 Brassica napus HOM05D005772 ORTHO05D006468 1.5e-10 70.9 118 33.9
BolC6t38196H Brassica oleracea HOM05D005772 ORTHO05D006468 1.5e-10 70.9 118 33.9
FAN09G4514 Fragaria x ananassa HOM05D005772 ORTHO05D006468 1.5e-10 70.9 236 27.5
A07p27410 Brassica napus HOM05D005772 ORTHO05D006468 1.9e-10 70.5 118 33.9
FAN14G5951 Fragaria x ananassa HOM05D005772 ORTHO05D006468 1.9e-10 70.5 236 27.1
BraA07t30382Z Brassica rapa HOM05D005772 ORTHO05D006468 2.5e-10 70.1 118 33.1
vmacro10401 Vaccinium macrocarpon HOM05D005772 ORTHO05D006468 2.5e-10 70.1 118 32.2
BolC5t30910H Brassica oleracea HOM05D002121 ORTHO05D039495 3.3e-10 69.7 41 78.0
CSS0004874 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 9.6e-10 68.2 118 33.1
Aa31LG4G2060 Aethionema arabicum HOM05D005772 ORTHO05D006468 1.3e-09 67.8 118 33.1
Oeu038376.1 Olea europaea HOM05D005772 ORTHO05D006468 1.3e-09 67.8 118 31.4
Nitab4.5_0003012g0080 Nicotiana tabacum HOM05D005772 ORTHO05D006468 3.6e-09 66.2 57 52.6
Sabra05G0136400 Salix brachista HOM05D005772 ORTHO05D006468 3.6e-09 66.2 164 34.1
Medtr0032s0080 Medicago truncatula HOM05D005772 ORTHO05D006468 1.1e-08 64.7 119 30.3
SalBow8G0153 Salvia bowleyana HOM05D005772 ORTHO05D006468 2.4e-08 63.5 240 32.1
Manes.14G007000 Manihot esculenta HOM05D005772 ORTHO05D006468 5.3e-08 62.4 118 29.7
Rhsim06G0101700 Rhododendron simsii HOM05D005772 ORTHO05D006468 1.3e-06 57.8 164 31.1
Haze_17513 Corylus avellana HOM05D000187 ORTHO05D000926 1.7e-06 57.4 213 31.0
SHI31127 Sapria himalayana HOM05D005772 ORTHO05D006468 3.8e-06 56.2 190 24.7
Sed0012770 Sechium edule HOM05D005772 ORTHO05D006468 3.8e-06 56.2 179 35.8


User provided reference genes

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