Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G34450 Arabidopsis lyrata HOM05D007108 ORTHO05D009128 2.1e-143 512.3 254 100.0
Carub.0001s2075 Capsella rubella HOM05D007108 ORTHO05D009128 8.7e-129 463.8 254 91.7
Thhalv10008558m.g Eutrema salsugineum HOM05D007108 ORTHO05D009128 1.2e-125 453.4 254 88.6
CARHR021740 Cardamine hirsuta HOM05D007108 ORTHO05D009128 1.5e-125 453.0 254 89.0
Sp1g18900 Schrenkiella parvula HOM05D007108 ORTHO05D009128 5.1e-121 438.0 254 87.0
Aa31LG7G5350 Aethionema arabicum HOM05D007108 ORTHO05D009128 2.5e-120 435.6 254 85.0
A06p17400 Brassica napus HOM05D007108 ORTHO05D009128 1.3e-119 433.3 254 84.6
BcaB07g32123 Brassica carinata HOM05D007108 ORTHO05D009128 3.7e-119 431.8 255 84.7
AT1G21350 Arabidopsis thaliana HOM05D007108 ORTHO05D009128 5.8e-117 424.5 254 84.6
BraA06t24837Z Brassica rapa HOM05D007108 ORTHO05D009128 5.8e-117 424.5 253 83.8
BcaC05g26041 Brassica carinata HOM05D007108 ORTHO05D009128 6.7e-113 411.0 255 82.4
BolC5t30716H Brassica oleracea HOM05D007108 ORTHO05D009128 3.3e-112 408.7 255 82.0
THA.LOC104812052 Tarenaya hassleriana HOM05D007108 ORTHO05D009128 2.6e-109 399.1 255 78.4
C05p20230 Brassica napus HOM05D007108 ORTHO05D009128 1.9e-104 382.9 241 81.7
Peaxi162Scf00263g00613 Petunia axillaris HOM05D007108 ORTHO05D009128 7.2e-99 364.4 249 73.9
MD05G1017900 Malus domestica HOM05D007108 ORTHO05D009128 1.2e-98 363.6 249 74.3
FvH4_2g14420 Fragaria vesca HOM05D007108 ORTHO05D009128 1.8e-97 359.8 234 76.9
Ciclev10002261m.g Citrus clementina HOM05D007108 ORTHO05D009128 2.3e-97 359.4 247 71.3
CSS0020358 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 3.9e-97 358.6 252 71.0
RcHm_v2.0_Chr6g0276751 Rosa chinensis HOM05D007108 ORTHO05D009128 6.7e-97 357.8 197 85.3
Sopen04g026870 Solanum pennellii HOM05D007108 ORTHO05D009128 6.7e-97 357.8 255 72.2
CAN.G1564.2 Capsicum annuum HOM05D007108 ORTHO05D009128 2.0e-96 356.3 253 72.7
CSS0038886 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 2.5e-96 355.9 252 71.0
Lj1g0003350 Lotus japonicus HOM05D007108 ORTHO05D009128 3.7e-95 352.1 200 81.0
Thecc.08G146100 Theobroma cacao HOM05D007108 ORTHO05D009128 6.3e-95 351.3 255 69.8
Eucgr.F02729 Eucalyptus grandis HOM05D007108 ORTHO05D009128 1.4e-94 350.1 236 72.9
ECA232G2155 Erigeron canadensis HOM05D007108 ORTHO05D009128 2.4e-94 349.4 250 70.0
Solyc04g064930.3 Solanum lycopersicum HOM05D007108 ORTHO05D009128 2.4e-94 349.4 255 71.4
CsaV3_7G024840 Cucumis sativus L. HOM05D007108 ORTHO05D009128 3.1e-94 349.0 198 83.3
Nn5g28655 Nelumbo nucifera HOM05D007108 ORTHO05D009128 3.1e-94 349.0 253 71.1
TAR628G0410 Trochodendron aralioides HOM05D007108 ORTHO05D009128 3.1e-94 349.0 238 74.8
ClCG09G009870 Citrullus lanatus HOM05D007108 ORTHO05D009128 4.1e-94 348.6 253 71.9
CANSAT25G1119 Cannabis sativa HOM05D007108 ORTHO05D009128 9.1e-94 347.4 257 71.2
Prupe.8G021900 Prunus persica HOM05D007108 ORTHO05D009128 9.1e-94 347.4 214 78.0
Sed0009335 Sechium edule HOM05D007108 ORTHO05D009128 9.1e-94 347.4 248 71.0
Atru.chr13.2257 Acer truncatum HOM05D007108 ORTHO05D009128 1.2e-93 347.1 248 70.6
Phvul.009G136100 Phaseolus vulgaris HOM05D007108 ORTHO05D009128 1.2e-93 347.1 212 78.8
Actinidia29517 Actinidia chinensis HOM05D007108 ORTHO05D009128 1.5e-93 346.7 219 77.6
TPR.G18750 Trifolium pratense HOM05D007108 ORTHO05D009128 1.5e-93 346.7 206 81.1
Duzib116G0089 Durio zibethinus HOM05D007108 ORTHO05D009128 2.0e-93 346.3 255 69.8
VMungo1309G2491 Vigna mungo HOM05D007108 ORTHO05D009128 2.0e-93 346.3 197 83.2
GSVIVG01010051001 Vitis vinifera HOM05D007108 ORTHO05D009128 2.0e-93 346.3 251 72.5
Haze_17721 Corylus avellana HOM05D007108 ORTHO05D009128 3.4e-93 345.5 257 68.9
Aqoxy5G02215 Aquilegia oxysepala HOM05D007108 ORTHO05D009128 5.9e-93 344.7 195 82.6
Gohir.D05G243400 Gossypium hirsutum HOM05D007108 ORTHO05D009128 7.7e-93 344.4 206 80.1
Gorai.009G252700 Gossypium raimondii HOM05D007108 ORTHO05D009128 1.0e-92 344.0 249 70.3
Gohir.A05G242100 Gossypium hirsutum HOM05D007108 ORTHO05D009128 1.3e-92 343.6 251 69.3
HanXRQChr16g0500661 Helianthus annuus HOM05D007108 ORTHO05D009128 1.3e-92 343.6 198 80.3
QL02p024940 Quercus lobata HOM05D007108 ORTHO05D009128 1.3e-92 343.6 194 83.5
Migut.C01030 Erythranthe guttata HOM05D007108 ORTHO05D009128 2.2e-92 342.8 254 68.9
PSO063G1249 Papaver somniferum HOM05D007108 ORTHO05D009128 2.2e-92 342.8 254 67.3
MSTRG.1369 Avicennia marina HOM05D007108 ORTHO05D009128 2.9e-92 342.4 258 67.1
Glyma.04G239800 Glycine max HOM05D007108 ORTHO05D009128 5.0e-92 341.7 232 72.8
Potri.002G071000 Populus trichocarpa HOM05D007108 ORTHO05D009128 5.0e-92 341.7 239 72.0
TWI34G1539 Tripterygium wilfordii HOM05D007108 ORTHO05D009128 5.0e-92 341.7 208 78.4
vmacro13384 Vaccinium macrocarpon HOM05D007108 ORTHO05D009128 8.5e-92 340.9 236 73.7
Lsat_1_v5_gn_9_77661 Lactuca sativa HOM05D007108 ORTHO05D009128 1.1e-91 340.5 256 68.8
PSO782G4411 Papaver somniferum HOM05D007108 ORTHO05D009128 1.4e-91 340.1 254 66.9
Manes.18G088801 Manihot esculenta HOM05D007108 ORTHO05D009128 2.5e-91 339.3 252 71.4
Glyma.06G124100 Glycine max HOM05D007108 ORTHO05D009128 5.5e-91 338.2 196 81.1
Medtr3g090490 Medicago truncatula HOM05D007108 ORTHO05D009128 5.5e-91 338.2 223 75.8
Cc10_g14220 Coffea canephora HOM05D007108 ORTHO05D009128 2.1e-90 336.3 249 67.1
Ca_16662_v3 Cicer arietinum L. HOM05D007108 ORTHO05D009128 2.7e-90 335.9 200 79.5
DCAR_010274 Daucus carota HOM05D007108 ORTHO05D009128 3.6e-90 335.5 194 79.4
Rhsim07G0025600 Rhododendron simsii HOM05D007108 ORTHO05D009128 1.4e-89 333.6 248 68.5
Sc02g0004350 Simmondsia chinensis HOM05D007108 ORTHO05D009128 2.3e-89 332.8 253 68.4
Cpa.g.sc49.50 Carica papaya HOM05D007108 ORTHO05D009128 3.0e-89 332.4 242 69.4
Hma1.2p1_0107F.1_g051540 Hydrangea macrophylla HOM05D007108 ORTHO05D009128 1.1e-88 330.5 216 75.0
Oeu000778.2 Olea europaea HOM05D007108 ORTHO05D009128 7.4e-88 327.8 285 61.8
Lalb_Chr11g0066481 Lupinus albus HOM05D007108 ORTHO05D009128 9.7e-88 327.4 202 74.8
COL.COLO4_06005 Corchorus olitorius HOM05D007108 ORTHO05D009128 2.8e-87 325.9 251 68.5
arahy.Tifrunner.gnm1.ann1.3M80B2 Arachis hypogaea HOM05D007108 ORTHO05D009128 9.1e-86 320.9 227 70.0
CDE08G0865 Ceratophyllum demersum HOM05D007108 ORTHO05D009128 2.0e-85 319.7 200 75.5
Os07g0260300 Oryza sativa ssp. japonica HOM05D007108 ORTHO05D009128 5.9e-85 318.2 191 78.0
Nitab4.5_0000299g0220 Nicotiana tabacum HOM05D007108 ORTHO05D009128 1.9e-83 313.2 254 65.4
ATR1136G010 Amborella trichopoda HOM05D007108 ORTHO05D009128 3.2e-83 312.4 210 74.8
EL10Ac1g01484 Beta vulgaris HOM05D007108 ORTHO05D009128 3.2e-83 312.4 251 64.1
SEGI_12340 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 3.2e-83 312.4 247 62.8
arahy.Tifrunner.gnm1.ann1.QUZ9E8 Arachis hypogaea HOM05D007108 ORTHO05D009128 1.4e-81 307.0 255 63.1
Pp3c20_22500 Physcomitrium patens HOM05D007108 ORTHO05D009128 6.3e-79 298.1 197 70.6
FAN20G1168 Fragaria x ananassa HOM05D007108 ORTHO05D009128 1.4e-78 297.0 202 74.8
CiPaw.16G016700 Carya illinoinensis HOM05D007108 ORTHO05D009128 9.1e-78 294.3 194 73.7
SGA_v2.0_scaffold24G10368 Striga asiatica HOM05D007108 ORTHO05D009128 1.6e-77 293.5 213 71.8
Dinv41114 Davidia involucrata HOM05D007108 ORTHO05D009128 2.7e-77 292.7 202 73.3
CBR_g41654 Chara braunii HOM05D007108 ORTHO05D009128 1.7e-76 290.0 207 66.7
SEGI_05187 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 1.7e-76 290.0 185 71.4
AUR62026764 Chenopodium quinoa HOM05D007108 ORTHO05D009128 4.2e-75 285.4 245 60.8
Psat5g082320 Pisum sativum HOM05D007108 ORTHO05D009128 4.0e-73 278.9 201 71.6
Actinidia01141 Actinidia chinensis HOM05D007108 ORTHO05D009128 6.8e-73 278.1 197 70.1
Pp3c23_490 Physcomitrium patens HOM05D007108 ORTHO05D009128 6.8e-73 278.1 175 69.1
AagrBONN_evm.TU.Sc2ySwM_117.292 Anthoceros agrestis HOM05D007108 ORTHO05D009128 7.5e-72 274.6 193 67.4
unitig_26.g9907 Utricularia gibba HOM05D007108 ORTHO05D009128 1.5e-64 250.4 203 62.6
AUR62013508 Chenopodium quinoa HOM05D007108 ORTHO05D009128 3.4e-64 249.2 260 53.8
Sabra02G0055700 Salix brachista HOM05D007108 ORTHO05D009128 9.8e-64 247.7 232 59.9
MELO3C024103.2 Cucumis melo HOM05D007108 ORTHO05D009128 6.3e-63 245.0 139 84.2
SMO228G0194 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 2.4e-62 243.0 148 76.4
Nitab4.5_0000427g0030 Nicotiana tabacum HOM05D007108 ORTHO05D009128 2.6e-56 223.0 137 78.8
SMO347G0599 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 3.4e-56 222.6 173 61.3
FAN15G3050 Fragaria x ananassa HOM05D007108 ORTHO05D009128 3.7e-55 219.2 229 55.9
FAN24G1879 Fragaria x ananassa HOM05D007108 ORTHO05D009128 3.2e-54 216.1 229 55.9
PSO384G3614 Papaver somniferum HOM05D007108 ORTHO05D009128 2.5e-51 206.5 196 56.1
Cre17.g715500 Chlamydomonas reinhardtii HOM05D007108 ORTHO05D009128 4.0e-49 199.1 196 51.0
Lj7A366T74 Lonicera japonica HOM05D007108 ORTHO05D009128 3.2e-46 189.5 200 53.0
HanXRQChr03g0063741 Helianthus annuus HOM05D007108 ORTHO05D009128 4.7e-42 175.6 103 76.7
SMO228G0031 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 3.1e-41 172.9 149 52.3
Zm00001eb097150 Zea mays HOM05D007108 ORTHO05D009128 2.6e-40 169.9 162 59.9
SEGI_19863 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 2.4e-38 163.3 105 73.3
Psat2g167120 Pisum sativum HOM05D007108 ORTHO05D003402 4.3e-27 125.9 71 84.5
Ca_16660_v3 Cicer arietinum L. HOM05D006773 ORTHO05D008775 2.3e-20 103.6 179 38.5
Psat7g065200 Pisum sativum HOM05D007108 ORTHO05D009128 3.9e-20 102.8 70 68.6
Dinv25820 Davidia involucrata HOM05D007108 ORTHO05D009128 3.4e-08 63.2 61 57.4


User provided reference genes

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