Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G33970 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 4.3e-214 747.7 365 100.0
AT1G20940 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 2.7e-171 605.5 401 77.3
AL1G45220 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 1.1e-132 477.2 396 62.6
AT1G20240 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 8.1e-112 407.9 338 62.7
AL1G33230 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 2.6e-110 402.9 396 55.6
Carub.0005s1178 Capsella rubella HOM05D007494 ORTHO05D009621 1.3e-101 374.0 380 57.4
AT1G20735 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 1.7e-101 373.6 401 54.1
Carub.0001s2057 Capsella rubella HOM05D007494 ORTHO05D009621 1.3e-98 364.0 415 51.3
A03p18740 Brassica napus HOM05D007494 ORTHO05D009621 1.8e-98 363.6 393 52.4
BraA03t11134Z Brassica rapa HOM05D007494 ORTHO05D009621 4.3e-97 359.0 393 51.9
Carub.0004s0895 Capsella rubella HOM05D007494 ORTHO05D009621 2.8e-96 356.3 374 55.1
AL1G33090 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 5.3e-95 352.1 338 56.8
C08p21040 Brassica napus HOM05D007494 ORTHO05D009621 7.9e-91 338.2 398 50.0
BcaB03g11879 Brassica carinata HOM05D007494 ORTHO05D009621 1.3e-90 337.4 398 49.7
BolC8t49740H Brassica oleracea HOM05D007494 ORTHO05D009621 3.3e-89 332.8 398 50.0
BcaC07g39120 Brassica carinata HOM05D007494 ORTHO05D009621 2.4e-87 326.6 403 49.1
AT1G20360 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 3.1e-87 326.2 293 61.8
A08p28830 Brassica napus HOM05D007494 ORTHO05D009621 2.6e-86 323.2 387 49.6
BcaB03g12780 Brassica carinata HOM05D007494 ORTHO05D009621 4.5e-86 322.4 405 48.1
BraA08t34811Z Brassica rapa HOM05D007494 ORTHO05D009621 5.9e-86 322.0 387 49.4
Carub.0001s1977 Capsella rubella HOM05D007494 ORTHO05D009621 2.1e-83 313.5 277 59.2
BolC8t49745H Brassica oleracea HOM05D007494 ORTHO05D009621 4.4e-73 279.3 306 51.6
AL1G33790 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 2.7e-67 260.0 402 40.3
AT1G20690 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 3.6e-67 259.6 207 61.4
AL5G30530 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 1.3e-64 251.1 400 39.5
Thhalv10009430m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 9.1e-63 245.0 388 41.0
Thhalv10015953m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 9.1e-63 245.0 351 44.4
AT1G20795 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 1.3e-61 241.1 364 40.7
CARHR020740 Cardamine hirsuta HOM05D007494 ORTHO05D009621 5.0e-61 239.2 260 52.7
BcaC07g39114 Brassica carinata HOM05D007494 ORTHO05D009621 2.5e-60 236.9 365 43.0
Carub.0001s2024 Capsella rubella HOM05D007494 ORTHO05D009621 3.2e-60 236.5 400 39.8
A09p43410 Brassica napus HOM05D007494 ORTHO05D009621 4.2e-60 236.1 385 38.4
AT1G20790 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 1.2e-59 234.6 357 43.1
Thhalv10011090m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 1.2e-59 234.6 403 39.5
C08p25460 Brassica napus HOM05D007494 ORTHO05D009621 2.1e-59 233.8 380 39.7
BcaC07g39504 Brassica carinata HOM05D007494 ORTHO05D009621 6.1e-59 232.3 374 39.6
C08p25490 Brassica napus HOM05D007494 ORTHO05D009621 6.1e-59 232.3 374 39.6
BraA09t39810Z Brassica rapa HOM05D007494 ORTHO05D009621 6.1e-59 232.3 386 38.6
AT1G57580 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 5.2e-58 229.2 369 41.2
Sp1g18490 Schrenkiella parvula HOM05D007494 ORTHO05D009621 3.4e-57 226.5 386 40.7
AL1G67140 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 9.8e-57 224.9 365 40.8
BraA08t34860Z Brassica rapa HOM05D007494 ORTHO05D009621 2.8e-56 223.4 348 39.4
Thhalv10012024m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 3.7e-56 223.0 311 46.0
A08p29250 Brassica napus HOM05D007494 ORTHO05D009621 1.4e-55 221.1 348 39.1
C08p25440 Brassica napus HOM05D007494 ORTHO05D009621 1.4e-55 221.1 391 37.9
BolC8t50168H Brassica oleracea HOM05D007494 ORTHO05D009621 1.4e-55 221.1 363 38.0
BraA09t39811Z Brassica rapa HOM05D007494 ORTHO05D009621 1.4e-55 221.1 377 38.7
C08p21030 Brassica napus HOM05D007494 ORTHO05D009621 1.8e-55 220.7 259 49.8
BcaB01g00617 Brassica carinata HOM05D007494 ORTHO05D009621 3.5e-54 216.5 383 36.6
C08p20370 Brassica napus HOM05D007494 ORTHO05D009621 3.5e-54 216.5 348 40.5
BolC8t49665H Brassica oleracea HOM05D007494 ORTHO05D009621 3.5e-54 216.5 348 40.5
BcaC07g39499 Brassica carinata HOM05D007494 ORTHO05D009621 5.9e-54 215.7 383 37.6
BcaC07g39053 Brassica carinata HOM05D007494 ORTHO05D009621 1.0e-53 214.9 348 40.5
BcaB07g30752 Brassica carinata HOM05D007494 ORTHO05D009621 7.2e-52 208.8 346 38.7
Sp1g18390 Schrenkiella parvula HOM05D007494 ORTHO05D009621 2.1e-51 207.2 188 59.6
BcaB03g12853 Brassica carinata HOM05D007494 ORTHO05D009621 1.4e-50 204.5 346 38.4
THA.LOC104813281 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 2.0e-49 200.7 418 32.1
Aa31LG7G4950 Aethionema arabicum HOM05D007494 ORTHO05D009621 2.4e-47 193.7 371 36.1
BcaB03g13899 Brassica carinata HOM05D007494 ORTHO05D009621 9.2e-47 191.8 327 38.8
AT1G20800 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 2.0e-46 190.7 372 35.8
AT1G20290 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 2.9e-45 186.8 187 58.8
THA.LOC104813247 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 1.1e-44 184.9 362 35.1
Carub.0001s2025 Capsella rubella HOM05D007494 ORTHO05D009621 4.7e-43 179.5 398 35.7
Thhalv10012236m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 8.9e-42 175.3 324 36.7
Sp5g11780 Schrenkiella parvula HOM05D007494 ORTHO05D009621 1.3e-40 171.4 295 40.7
BcaB02g08200 Brassica carinata HOM05D007494 ORTHO05D009621 4.1e-39 166.4 324 37.3
Thhalv10012123m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 1.3e-37 161.4 250 43.6
A09p43390 Brassica napus HOM05D007494 ORTHO05D009621 1.7e-37 161.0 210 45.7
Thhalv10012172m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 2.3e-37 160.6 341 35.5
Thhalv10011940m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 1.1e-36 158.3 314 36.0
BolC8t50166H Brassica oleracea HOM05D007494 ORTHO05D009621 3.3e-36 156.8 286 37.4
BcaC07g39500 Brassica carinata HOM05D007494 ORTHO05D009621 4.0e-34 149.8 184 45.1
Aa31LG8G15360 Aethionema arabicum HOM05D007494 ORTHO05D009621 2.6e-33 147.1 315 35.2
AT1G57565 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 4.9e-32 142.9 191 41.9
Aa31LG7G4960 Aethionema arabicum HOM05D007494 ORTHO05D009621 7.8e-30 135.6 325 32.6
Thhalv10012136m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 1.3e-29 134.8 289 32.5
THA.LOC104813248 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 2.5e-28 130.6 379 28.2
Aa31LG8G15370 Aethionema arabicum HOM05D007494 ORTHO05D009621 4.7e-27 126.3 339 29.2
BolC8t50169H Brassica oleracea HOM05D007494 ORTHO05D009621 3.2e-23 113.6 242 37.2
A09p43460 Brassica napus HOM05D007494 ORTHO05D009621 1.1e-20 105.1 276 32.2
AL1G32830 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 4.3e-20 103.2 69 72.5
C08p21080 Brassica napus HOM05D007494 ORTHO05D009621 3.6e-19 100.1 117 50.4
BcaB01g00618 Brassica carinata HOM05D007494 ORTHO05D009621 4.7e-19 99.8 206 38.3
Aa31LG8G15340 Aethionema arabicum HOM05D007494 ORTHO05D009621 1.1e-18 98.6 130 43.8
QL02p015450 Quercus lobata HOM05D007494 ORTHO05D009621 1.1e-18 98.6 351 28.8
BcaC01g05840 Brassica carinata HOM05D007494 ORTHO05D009621 8.4e-16 89.0 100 51.0
BcaC07g39502 Brassica carinata HOM05D007494 ORTHO05D009621 8.4e-16 89.0 192 33.9
C08p25470 Brassica napus HOM05D007494 ORTHO05D009621 8.4e-16 89.0 192 33.9
BraA09t39809Z Brassica rapa HOM05D007494 ORTHO05D009621 4.1e-15 86.7 101 43.6
Oeu004534.1 Olea europaea HOM05D008697 ORTHO05D010866 1.6e-14 84.7 362 26.0
BraA09t39808Z Brassica rapa HOM05D007494 ORTHO05D009621 1.4e-10 71.6 116 38.8
AL8G44280 Arabidopsis lyrata HOM05D000015 ORTHO05D000734 1.8e-10 71.2 84 47.6
A09p43420 Brassica napus HOM05D007494 ORTHO05D009621 3.1e-10 70.5 102 39.2
BcaC07g39503 Brassica carinata HOM05D007494 ORTHO05D032917 2.6e-09 67.4 99 35.4
C08p25480 Brassica napus HOM05D007494 ORTHO05D032917 2.6e-09 67.4 99 35.4
BraA08t34812Z Brassica rapa HOM05D007494 ORTHO05D009621 1.3e-08 65.1 77 48.1
Duzib041G0294 Durio zibethinus HOM05D007494 ORTHO05D009621 4.2e-07 60.1 340 23.5
COL.COLO4_14578 Corchorus olitorius HOM05D000007 ORTHO05D000017 2.1e-06 57.8 235 26.8
AL1G33800 Arabidopsis lyrata HOM05D013746 ORTHO05D015945 6.0e-06 56.2 45 57.8
AT1G20803 Arabidopsis thaliana HOM05D013746 ORTHO05D015945 6.0e-06 56.2 37 62.2


User provided reference genes

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