Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G32230 Arabidopsis lyrata HOM05D004666 ORTHO05D005822 0.0e+00 1415.2 702 100.0
AT1G19485 Arabidopsis thaliana HOM05D004666 ORTHO05D005822 0.0e+00 1265.4 706 90.7
Carub.0001s1905 Capsella rubella HOM05D004666 ORTHO05D005822 0.0e+00 1250.3 704 88.6
Sp1g17360 Schrenkiella parvula HOM05D004666 ORTHO05D005822 0.0e+00 1201.0 712 84.0
CARHR020050 Cardamine hirsuta HOM05D004666 ORTHO05D005822 0.0e+00 1199.5 704 85.2
A08p29790 Brassica napus HOM05D004666 ORTHO05D005822 0.0e+00 1168.7 712 81.7
BraA08t34913Z Brassica rapa HOM05D004666 ORTHO05D005822 0.0e+00 1164.1 711 81.6
BolC8t49572H Brassica oleracea HOM05D004666 ORTHO05D005822 0.0e+00 1133.6 696 81.2
Thhalv10006802m.g Eutrema salsugineum HOM05D004666 ORTHO05D005822 0.0e+00 1115.5 714 79.1
C08p19490 Brassica napus HOM05D004666 ORTHO05D005822 0.0e+00 1112.8 710 78.3
BolC5t30496H Brassica oleracea HOM05D004666 ORTHO05D005822 0.0e+00 1104.7 710 78.3
C05p17890 Brassica napus HOM05D004666 ORTHO05D005822 0.0e+00 1098.6 709 78.4
A06p15660 Brassica napus HOM05D004666 ORTHO05D005822 0.0e+00 1082.0 696 78.3
BraA06t24675Z Brassica rapa HOM05D004666 ORTHO05D005822 0.0e+00 1082.0 696 78.3
BcaB03g12912 Brassica carinata HOM05D004666 ORTHO05D005822 1.1e-309 1066.2 710 75.4
Aa31LG7G4140 Aethionema arabicum HOM05D004666 ORTHO05D005822 1.5e-287 992.6 704 71.0
THA.LOC104827512 Tarenaya hassleriana HOM05D004666 ORTHO05D005822 3.6e-249 865.1 723 61.7
Dinv21227 Davidia involucrata HOM05D004666 ORTHO05D005822 1.6e-201 706.8 735 50.2
CiPaw.09G011000 Carya illinoinensis HOM05D004666 ORTHO05D005822 3.6e-201 705.7 735 52.8
QL07p039593 Quercus lobata HOM05D004666 ORTHO05D005822 1.2e-196 690.6 735 52.1
Thecc.01G223300 Theobroma cacao HOM05D004666 ORTHO05D005822 1.6e-196 690.3 749 51.3
Rhsim05G0022800 Rhododendron simsii HOM05D004666 ORTHO05D005822 1.0e-195 687.6 749 49.0
Gohir.A07G200500 Gossypium hirsutum HOM05D004666 ORTHO05D005822 3.3e-194 682.6 765 48.1
Gorai.001G233200 Gossypium raimondii HOM05D004666 ORTHO05D005822 1.6e-193 680.2 768 47.9
Cfa002067 Carpinus fangiana HOM05D004666 ORTHO05D005822 8.1e-193 677.9 741 52.0
COL.COLO4_15658 Corchorus olitorius HOM05D004666 ORTHO05D005822 5.2e-192 675.2 881 43.2
vmacro17219 Vaccinium macrocarpon HOM05D004666 ORTHO05D005822 2.0e-191 673.3 746 48.9
vmacro22687 Vaccinium macrocarpon HOM05D004666 ORTHO05D005822 6.4e-190 668.3 715 51.3
Gohir.D07G206800 Gossypium hirsutum HOM05D004666 ORTHO05D005822 7.1e-189 664.8 769 47.1
TAR365G1212 Trochodendron aralioides HOM05D004666 ORTHO05D005822 2.1e-188 663.3 734 49.0
Potri.008G200900 Populus trichocarpa HOM05D004666 ORTHO05D005822 4.6e-188 662.1 808 45.5
Oeu040521.1 Olea europaea HOM05D004666 ORTHO05D005822 1.3e-185 654.1 706 50.8
Manes.13G012000 Manihot esculenta HOM05D004666 ORTHO05D005822 5.3e-184 648.7 781 48.5
GSVIVG01032069001 Vitis vinifera HOM05D004666 ORTHO05D005822 6.9e-184 648.3 717 48.4
TWI34G1071 Tripterygium wilfordii HOM05D004666 ORTHO05D005822 1.6e-180 637.1 755 46.6
MELO3C009457.2 Cucumis melo HOM05D004666 ORTHO05D005822 8.7e-179 631.3 755 48.3
Atru.chr8.1588 Acer truncatum HOM05D004666 ORTHO05D005822 1.4e-173 614.0 627 52.5
Aqoxy3G00997 Aquilegia oxysepala HOM05D004666 ORTHO05D005822 7.1e-173 611.7 814 45.3
Sed0022470 Sechium edule HOM05D004666 ORTHO05D005822 6.0e-172 608.6 773 46.1
Prupe.7G114200 Prunus persica HOM05D004666 ORTHO05D005822 1.0e-171 607.8 875 42.7
CANSAT54G2995 Cannabis sativa HOM05D004666 ORTHO05D005822 1.3e-171 607.4 735 45.9
FvH4_6g18260 Fragaria vesca HOM05D004666 ORTHO05D005822 3.3e-170 602.8 910 41.0
CsaV3_3G037120 Cucumis sativus L. HOM05D004666 ORTHO05D005822 1.3e-169 600.9 786 44.4
RcHm_v2.0_Chr4g0409331 Rosa chinensis HOM05D004666 ORTHO05D005822 5.3e-168 595.5 942 39.8
ClCG10G019140 Citrullus lanatus HOM05D004666 ORTHO05D005822 1.1e-165 587.8 746 45.8
PGR142G0825 Punica granatum HOM05D004666 ORTHO05D005822 9.3e-165 584.7 771 44.7
Cc06_g05530 Coffea canephora HOM05D004666 ORTHO05D005822 1.2e-164 584.3 778 43.6
EL10Ac7g16949 Beta vulgaris HOM05D004666 ORTHO05D005822 1.8e-163 580.5 850 40.4
Medtr1g060580 Medicago truncatula HOM05D004666 ORTHO05D005822 2.3e-163 580.1 793 44.3
Lsat_1_v5_gn_1_48480 Lactuca sativa HOM05D004666 ORTHO05D005822 6.7e-163 578.6 704 44.7
PSO384G1605 Papaver somniferum HOM05D004666 ORTHO05D005822 2.2e-161 573.5 940 39.3
PSO425G0050 Papaver somniferum HOM05D004666 ORTHO05D005822 3.7e-161 572.8 944 39.0
DCAR_013376 Daucus carota HOM05D004666 ORTHO05D005822 6.3e-161 572.0 781 41.7
MD09G1081300 Malus domestica HOM05D004666 ORTHO05D005822 2.6e-159 566.6 857 42.5
Ca_26672_v3 Cicer arietinum L. HOM05D004666 ORTHO05D005822 5.9e-159 565.5 804 42.4
Ca_30723_v3 Cicer arietinum L. HOM05D004666 ORTHO05D005822 5.9e-159 565.5 804 42.4
arahy.Tifrunner.gnm1.ann1.WFL2XE Arachis hypogaea HOM05D004666 ORTHO05D005822 1.1e-157 561.2 780 42.1
FvH4_7g02500 Fragaria vesca HOM05D004666 ORTHO05D005822 1.1e-157 561.2 900 40.6
Psat6g082920 Pisum sativum HOM05D004666 ORTHO05D005822 1.9e-157 560.5 797 41.7
arahy.Tifrunner.gnm1.ann1.G8H5C8 Arachis hypogaea HOM05D004666 ORTHO05D005822 3.2e-157 559.7 802 41.4
HanXRQChr01g0029141 Helianthus annuus HOM05D004666 ORTHO05D005822 1.6e-156 557.4 743 42.9
TWI73G1120 Tripterygium wilfordii HOM05D004666 ORTHO05D005822 6.1e-156 555.4 748 44.7
RcHm_v2.0_Chr3g0472691 Rosa chinensis HOM05D004666 ORTHO05D005822 7.9e-156 555.1 495 56.4
arahy.Tifrunner.gnm1.ann1.T4KAXF Arachis hypogaea HOM05D004666 ORTHO05D005822 1.3e-155 554.3 805 41.0
MD12G1022600 Malus domestica HOM05D004666 ORTHO05D005822 1.1e-154 551.2 835 42.8
Ciclev10011197m.g Citrus clementina HOM05D004666 ORTHO05D005822 4.3e-154 549.3 594 49.2
Lalb_Chr02g0155381 Lupinus albus HOM05D004666 ORTHO05D005822 9.7e-154 548.1 891 37.8
TPR.G35431 Trifolium pratense HOM05D004666 ORTHO05D005822 4.8e-153 545.8 825 39.9
Glyma.10G068100 Glycine max HOM05D004666 ORTHO05D005822 1.1e-152 544.7 947 37.6
Nitab4.5_0000794g0050 Nicotiana tabacum HOM05D004666 ORTHO05D005822 2.4e-152 543.5 763 43.0
Sed0014063 Sechium edule HOM05D004666 ORTHO05D005822 4.1e-152 542.7 910 38.4
Phvul.011G176600 Phaseolus vulgaris HOM05D004666 ORTHO05D005822 1.5e-151 540.8 937 39.0
Lj2C133G10 Lonicera japonica HOM05D004666 ORTHO05D005822 3.4e-151 539.7 894 37.7
Hund26220 Selenicereus undatus HOM05D004666 ORTHO05D005822 6.5e-150 535.4 963 34.9
Lj5g0013478 Lotus japonicus HOM05D004666 ORTHO05D005822 1.1e-149 534.6 897 38.6
Migut.J00966 Erythranthe guttata HOM05D004666 ORTHO05D005822 1.5e-146 524.2 700 43.3
FAN06G2408 Fragaria x ananassa HOM05D004666 ORTHO05D005822 1.5e-146 524.2 906 38.1
AUR62033523 Chenopodium quinoa HOM05D004666 ORTHO05D005822 7.4e-146 521.9 873 37.2
Phvul.007G229800 Phaseolus vulgaris HOM05D004666 ORTHO05D005822 6.3e-145 518.8 931 37.1
Haze_19573 Corylus avellana HOM05D004666 ORTHO05D005822 2.4e-144 516.9 734 44.8
Sc02g0001000 Simmondsia chinensis HOM05D004666 ORTHO05D005822 9.1e-144 515.0 990 36.0
Solyc09g009710.4 Solanum lycopersicum HOM05D004666 ORTHO05D005822 2.6e-143 513.5 774 39.3
Sopen09g004490 Solanum pennellii HOM05D004666 ORTHO05D005822 1.7e-142 510.8 774 38.9
ECA248G3102 Erigeron canadensis HOM05D004666 ORTHO05D005822 1.9e-141 507.3 945 36.0
MBI17_g35786_MAGBIO Magnolia biondii HOM05D004666 ORTHO05D005822 2.7e-140 503.4 714 42.7
Nitab4.5_0009916g0020 Nicotiana tabacum HOM05D004666 ORTHO05D005822 3.6e-140 503.1 757 43.2
arahy.Tifrunner.gnm1.ann1.LSN657 Arachis hypogaea HOM05D004666 ORTHO05D005822 6.1e-140 502.3 775 39.4
Ah.08g210700 Amaranthus hybridus HOM05D004666 ORTHO05D005822 3.0e-139 500.0 895 35.0
SGA_v2.0_scaffold147G36363 Striga asiatica HOM05D004666 ORTHO05D005822 6.7e-139 498.8 705 42.8
FAN03G3209 Fragaria x ananassa HOM05D004666 ORTHO05D005822 7.4e-138 495.4 955 36.8
Potri.006G036601 Populus trichocarpa HOM05D004666 ORTHO05D005822 7.4e-138 495.4 642 44.5
Lj5g0018797 Lotus japonicus HOM05D004666 ORTHO05D005822 6.3e-137 492.3 799 38.5
Peaxi162Scf00015g00639 Petunia axillaris HOM05D004666 ORTHO05D005822 5.0e-134 482.6 796 39.6
VMungo0720G2175 Vigna mungo HOM05D004666 ORTHO05D005822 1.1e-133 481.5 480 51.9
ECA248G2596 Erigeron canadensis HOM05D004666 ORTHO05D005822 2.7e-132 476.9 529 48.0
Duzib114G0569 Durio zibethinus HOM05D004666 ORTHO05D005822 6.1e-132 475.7 713 42.6
HPP92_015079 Vanilla planifolia HOM05D004666 ORTHO05D005822 6.7e-131 472.2 527 46.9
SalBow3G3865 Salvia bowleyana HOM05D004666 ORTHO05D005822 2.0e-130 470.7 727 39.1
FAN02G3237 Fragaria x ananassa HOM05D004666 ORTHO05D005822 4.5e-127 459.5 685 41.0
Nn2g14084 Nelumbo nucifera HOM05D004666 ORTHO05D005822 8.0e-124 448.7 494 50.2
CDE08G1659 Ceratophyllum demersum HOM05D004666 ORTHO05D005822 4.4e-122 443.0 692 37.0
Peaxi162Scf00036g00125 Petunia axillaris HOM05D004666 ORTHO05D005822 8.3e-121 438.7 830 37.8
AUR62028568 Chenopodium quinoa HOM05D004666 ORTHO05D005822 9.2e-112 408.7 789 34.3
unitig_749.g14294 Utricularia gibba HOM05D004666 ORTHO05D005822 1.6e-111 407.9 694 36.6
Zm00001eb147330 Zea mays HOM05D004666 ORTHO05D005822 3.8e-110 403.3 496 42.9
FAN05G5602 Fragaria x ananassa HOM05D004666 ORTHO05D005822 9.5e-109 398.7 687 36.2
Eucgr.K02035 Eucalyptus grandis HOM05D004666 ORTHO05D005822 2.2e-105 387.5 283 60.1
Cpa.g.sc5.49 Carica papaya HOM05D004666 ORTHO05D005822 6.6e-102 375.9 314 57.6
Os01g0858000 Oryza sativa ssp. japonica HOM05D004666 ORTHO05D005822 2.1e-100 370.9 521 41.8
Pp3c1_31470 Physcomitrium patens HOM05D004666 ORTHO05D005822 5.8e-98 362.8 717 33.3
AagrBONN_evm.TU.Sc2ySwM_344.3422 Anthoceros agrestis HOM05D004666 ORTHO05D005822 1.1e-96 358.6 720 34.3
Mapoly0021s0027 Marchantia polymorpha HOM05D004666 ORTHO05D005822 2.1e-95 354.4 711 34.5
Sabra08G0160300 Salix brachista HOM05D004666 ORTHO05D005822 3.9e-94 350.1 520 40.6
Sabra12G0045300 Salix brachista HOM05D004666 ORTHO05D005822 9.9e-90 335.5 553 38.3
Hma1.2p1_2087F.1_g313760 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 1.9e-77 294.7 299 52.5
ATR0820G266 Amborella trichopoda HOM05D004666 ORTHO05D005822 7.1e-56 223.0 287 43.2
Haze_16425 Corylus avellana HOM05D004666 ORTHO05D005822 1.8e-54 218.4 287 46.7
CBR_g38478 Chara braunii HOM05D004666 ORTHO05D005822 6.2e-52 209.9 264 42.0
ATR0820G291 Amborella trichopoda HOM05D004666 ORTHO05D005822 1.6e-47 195.3 332 33.7
Rhsim09G0020300 Rhododendron simsii HOM05D004666 ORTHO05D005822 8.7e-46 189.5 409 34.5
PGSC0003DMG400008959 Solanum tuberosum HOM05D004666 ORTHO05D005822 1.5e-45 188.7 414 31.2
SEGI_09998 Sequoiadendron giganteum HOM05D004666 ORTHO05D005822 1.3e-44 185.7 131 64.1
Hma1.2p1_0084F.1_g043480 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 2.6e-42 177.9 212 48.1
RhsimUnG0189100 Rhododendron simsii HOM05D004666 ORTHO05D005822 1.1e-40 172.6 214 46.3
FAN05G4874 Fragaria x ananassa HOM05D004666 ORTHO05D005822 3.3e-37 161.0 488 29.7
Hma1.2p1_2087F.1_g313780 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 3.1e-35 154.5 218 40.8
SHI23868 Sapria himalayana HOM05D004666 ORTHO05D005822 9.4e-32 142.9 212 42.0
FAN14G5421 Fragaria x ananassa HOM05D004666 ORTHO05D005822 1.8e-30 138.7 234 38.5
QL03p004438 Quercus lobata HOM05D004666 ORTHO05D005822 2.0e-29 135.2 100 61.0
SEGI_32780 Sequoiadendron giganteum HOM05D004666 ORTHO05D005822 2.0e-29 135.2 212 40.6
Cpa.g.c36918 Carica papaya HOM05D004666 ORTHO05D005822 3.7e-28 131.0 214 44.4
Eucgr.L02043 Eucalyptus grandis HOM05D004666 ORTHO05D005822 1.8e-27 128.6 206 38.8
FAN09G1276 Fragaria x ananassa HOM05D004666 ORTHO05D005822 4.1e-27 127.5 108 57.4
Hma1.2p1_0084F.1_g043500 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 7.0e-27 126.7 363 30.3
RcHm_v2.0_Chr3g0472701 Rosa chinensis HOM05D004666 ORTHO05D005822 1.7e-25 122.1 108 54.6
Hma1.2p1_0084F.1_g043490 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 6.5e-25 120.2 101 56.4
CDE08G0815 Ceratophyllum demersum HOM05D004666 ORTHO05D005822 1.9e-24 118.6 186 36.6
QL03p004414 Quercus lobata HOM05D004666 ORTHO05D005822 2.5e-24 118.2 311 30.2
Sabra06G0024800 Salix brachista HOM05D004666 ORTHO05D005822 2.0e-21 108.6 185 37.8
CSS0049785 Camellia sinensis var. sinensis HOM05D004666 ORTHO05D005822 9.7e-21 106.3 116 50.9
CDE08G0899 Ceratophyllum demersum HOM05D007279 ORTHO05D009212 3.8e-17 94.4 60 56.7
FAN10G4251 Fragaria x ananassa HOM05D004666 ORTHO05D005822 5.5e-16 90.5 526 25.3
Os02g0307300 Oryza sativa ssp. japonica HOM05D004666 ORTHO05D005822 2.7e-15 88.2 178 34.8
RcHm_v2.0_Chr7g0223981 Rosa chinensis HOM05D004666 ORTHO05D005822 7.2e-08 63.5 55 52.7
Sabra16G0037300 Salix brachista HOM05D004666 ORTHO05D017783 9.4e-08 63.2 41 70.7


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