Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G28900 Arabidopsis lyrata HOM05D008842 ORTHO05D010931 1.0e-95 353.6 208 100.0
AT1G16730 Arabidopsis thaliana HOM05D008842 ORTHO05D010931 1.2e-78 297.0 208 87.5
Carub.0001s1647 Capsella rubella HOM05D008842 ORTHO05D010931 2.3e-71 272.7 212 80.2
Sp1g14880 Schrenkiella parvula HOM05D008842 ORTHO05D010931 5.7e-70 268.1 212 79.2
CARHR017190 Cardamine hirsuta HOM05D008842 ORTHO05D010931 1.7e-69 266.5 208 79.8
Thhalv10008754m.g Eutrema salsugineum HOM05D008842 ORTHO05D010931 1.7e-66 256.5 215 76.3
Aa31LG7G1190 Aethionema arabicum HOM05D008842 ORTHO05D010931 2.3e-63 246.1 218 71.6
BcaB03g13035 Brassica carinata HOM05D008842 ORTHO05D010931 5.4e-52 208.4 190 74.2
A08p31310 Brassica napus HOM05D008842 ORTHO05D010931 2.2e-45 186.4 191 69.6
BraA08t35054Z Brassica rapa HOM05D008842 ORTHO05D010931 3.2e-44 182.6 192 68.8
THA.LOC104812345 Tarenaya hassleriana HOM05D008842 ORTHO05D010931 8.9e-39 164.5 190 51.6
BcaC07g38810 Brassica carinata HOM05D008842 ORTHO05D010931 1.5e-38 163.7 110 82.7
QL05p085140 Quercus lobata HOM05D008842 ORTHO05D010931 1.2e-27 127.5 126 57.1
Gohir.D05G117500 Gossypium hirsutum HOM05D008842 ORTHO05D010931 7.8e-27 124.8 131 56.5
Gorai.009G121400 Gossypium raimondii HOM05D008842 ORTHO05D010931 7.8e-27 124.8 131 56.5
Gohir.A05G116600 Gossypium hirsutum HOM05D008842 ORTHO05D010931 1.7e-26 123.6 131 56.5
Thecc.06G049500 Theobroma cacao HOM05D008842 ORTHO05D010931 1.5e-25 120.6 127 55.1
Duzib235G0617 Durio zibethinus HOM05D008842 ORTHO05D010931 4.3e-25 119.0 126 55.6
EL10Ac8g19754 Beta vulgaris HOM05D008842 ORTHO05D010931 1.1e-23 114.4 225 48.0
Ciclev10029553m.g Citrus clementina HOM05D008842 ORTHO05D010931 1.1e-23 114.4 130 53.8
Cfa002161 Carpinus fangiana HOM05D008842 ORTHO05D010931 5.8e-22 108.6 129 51.2
COL.COLO4_26810 Corchorus olitorius HOM05D008842 ORTHO05D010931 1.1e-20 104.4 122 49.2
Haze_16245 Corylus avellana HOM05D008842 ORTHO05D010931 1.4e-20 104.0 128 47.7
GSVIVG01029445001 Vitis vinifera HOM05D008842 ORTHO05D010931 2.7e-19 99.8 196 35.7
ATR0626G313 Amborella trichopoda HOM05D008842 ORTHO05D010931 1.0e-18 97.8 206 36.9
CiPaw.01G092500 Carya illinoinensis HOM05D008842 ORTHO05D010931 2.3e-18 96.7 127 44.1
SEGI_26270 Sequoiadendron giganteum HOM05D008842 ORTHO05D010931 1.5e-17 94.0 203 39.4
Ah.09g232810 Amaranthus hybridus HOM05D008842 ORTHO05D010931 1.9e-17 93.6 118 50.0
SEGI_04041 Sequoiadendron giganteum HOM05D008842 ORTHO05D010931 9.6e-17 91.3 140 42.9
MD04G1031600 Malus domestica HOM05D008842 ORTHO05D010931 3.6e-16 89.4 71 57.7
AUR62027592 Chenopodium quinoa HOM05D008842 ORTHO05D010931 4.8e-16 89.0 74 62.2
CANSAT01G2106 Cannabis sativa HOM05D008842 ORTHO05D010931 8.1e-16 88.2 111 51.4
FAN14G1571 Fragaria x ananassa HOM05D008842 ORTHO05D010931 8.1e-16 88.2 157 38.9
FAN14G3737 Fragaria x ananassa HOM05D008842 ORTHO05D010931 8.1e-16 88.2 157 38.9
FvH4_6g36360 Fragaria vesca HOM05D008842 ORTHO05D010931 2.0e-14 83.6 171 45.0
FAN02G3250 Fragaria x ananassa HOM05D008842 ORTHO05D010931 4.9e-13 79.0 157 42.7
Sc05g0006440 Simmondsia chinensis HOM05D008842 ORTHO05D010931 4.9e-13 79.0 120 40.8
FAN09G2833 Fragaria x ananassa HOM05D008842 ORTHO05D010931 3.2e-12 76.3 155 41.9
C08p17520 Brassica napus HOM05D008842 ORTHO05D010931 7.9e-11 71.6 191 40.8
BolC8t49378H Brassica oleracea HOM05D008842 ORTHO05D010931 7.9e-11 71.6 191 40.8
Potri.007G003700 Populus trichocarpa HOM05D008842 ORTHO05D010931 1.9e-09 67.0 123 38.2


User provided reference genes

Program Settings