Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G25960 Arabidopsis lyrata HOM05D004824 ORTHO05D003903 5.9e-138 494.6 328 100.0
Carub.0001s1352 Capsella rubella HOM05D004824 ORTHO05D017526 1.8e-38 164.1 236 47.0
AL1G25600 Arabidopsis lyrata HOM05D004824 ORTHO05D003903 5.0e-36 156.0 265 41.9
AT1G13800 Arabidopsis thaliana HOM05D004824 ORTHO05D003903 9.4e-35 151.8 271 42.1
CARHR014190 Cardamine hirsuta HOM05D004824 ORTHO05D003903 3.0e-33 146.7 268 40.7
BraA06t24177Z Brassica rapa HOM05D004824 ORTHO05D003903 6.8e-33 145.6 242 41.3
Sp1g12140 Schrenkiella parvula HOM05D004824 ORTHO05D017526 2.6e-32 143.7 172 52.3
A06p09890 Brassica napus HOM05D004824 ORTHO05D003903 1.3e-31 141.4 175 50.9
BcaC05g25286 Brassica carinata HOM05D004824 ORTHO05D003903 2.4e-30 137.1 239 39.3
C05p11650 Brassica napus HOM05D004824 ORTHO05D003903 2.4e-30 137.1 239 39.3
BolC5t29912H Brassica oleracea HOM05D004824 ORTHO05D003903 2.4e-30 137.1 239 39.3
Thhalv10009810m.g Eutrema salsugineum HOM05D004824 ORTHO05D017526 2.7e-29 133.7 294 35.4
Aa31LG5G1800 Aethionema arabicum HOM05D004824 ORTHO05D007466 5.0e-20 102.8 207 38.2
BcaB02g06478 Brassica carinata HOM05D004824 ORTHO05D003903 4.4e-16 89.7 150 45.3
Aa31LG5G8990 Aethionema arabicum HOM05D004824 ORTHO05D003903 2.7e-13 80.5 268 30.6
Thhalv10009488m.g Eutrema salsugineum HOM05D004824 ORTHO05D031114 1.0e-12 78.6 97 47.4
CARHR014470 Cardamine hirsuta HOM05D004824 ORTHO05D017526 1.7e-12 77.8 94 53.2
BcaB08g37396 Brassica carinata HOM05D004824 ORTHO05D017526 7.3e-11 72.4 146 36.3
BolC4t23963H Brassica oleracea HOM05D004824 ORTHO05D003903 2.8e-10 70.5 268 28.4
BcaC02g10842 Brassica carinata HOM05D004824 ORTHO05D003903 3.6e-10 70.1 268 28.4
Carub.0001s1351 Capsella rubella HOM05D004824 ORTHO05D003903 3.6e-10 70.1 132 51.5
SHI25105 Sapria himalayana HOM05D008459 ORTHO05D003903 4.7e-10 69.7 135 29.6
C04p24590 Brassica napus HOM05D004824 ORTHO05D003903 1.0e-09 68.6 268 28.0
Thhalv10001906m.g Eutrema salsugineum HOM05D004824 ORTHO05D003903 1.0e-09 68.6 219 32.4
SHI24599 Sapria himalayana HOM05D008459 ORTHO05D003903 3.4e-08 63.5 240 25.0
AT2G26790 Arabidopsis thaliana HOM05D004824 ORTHO05D003903 5.8e-08 62.8 47 57.4
A07p17870 Brassica napus HOM05D004824 ORTHO05D003903 9.8e-08 62.0 147 40.1
BraA07t29506Z Brassica rapa HOM05D004824 ORTHO05D003903 9.8e-08 62.0 147 42.2
Carub.0004s0722 Capsella rubella HOM05D004824 ORTHO05D003903 9.8e-08 62.0 49 55.1
AL4G19980 Arabidopsis lyrata HOM05D004824 ORTHO05D003903 4.9e-07 59.7 49 55.1
Sp4g08720 Schrenkiella parvula HOM05D004824 ORTHO05D003903 1.9e-06 57.8 114 38.6
SHI51070 Sapria himalayana HOM05D008459 ORTHO05D003903 9.2e-06 55.5 224 24.6


User provided reference genes

Program Settings