Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G23700 Arabidopsis lyrata HOM05D017491 ORTHO05D005185 1.9e-34 148.7 80 100.0
AL855U10020 Arabidopsis lyrata HOM05D017491 ORTHO05D005185 1.9e-34 148.7 80 100.0
AL8G34840 Arabidopsis lyrata HOM05D017491 ORTHO05D005185 1.9e-34 148.7 80 100.0
AL1G34190 Arabidopsis lyrata HOM05D017491 ORTHO05D005185 4.3e-34 147.5 80 98.8
AL8G33300 Arabidopsis lyrata HOM05D017491 ORTHO05D005185 2.4e-24 115.2 57 96.5
AL1G53010 Arabidopsis lyrata HOM05D017491 ORTHO05D005185 2.0e-23 112.1 58 93.1
Carub.0007s0181 Capsella rubella HOM05D004626 ORTHO05D005185 1.1e-18 96.3 73 74.0
AT4G39880 Arabidopsis thaliana HOM05D004626 ORTHO05D005185 7.4e-18 93.6 73 72.6
AL7G12120 Arabidopsis lyrata HOM05D004626 ORTHO05D005185 2.8e-17 91.7 73 71.2
Sp7g36010 Schrenkiella parvula HOM05D004626 ORTHO05D005185 1.9e-13 79.0 73 63.0
CARHR246820 Cardamine hirsuta HOM05D004626 ORTHO05D005185 7.2e-13 77.0 75 64.0
Thhalv10026378m.g Eutrema salsugineum HOM05D004626 ORTHO05D005185 2.7e-12 75.1 73 58.9
A01p00780 Brassica napus HOM05D004626 ORTHO05D005185 6.1e-12 73.9 73 58.9
BraA01t00081Z Brassica rapa HOM05D004626 ORTHO05D005185 8.0e-12 73.6 73 57.5
BcaNung00909 Brassica carinata HOM05D004626 ORTHO05D005185 2.3e-11 72.0 74 58.1
BcaNung02302 Brassica carinata HOM05D004626 ORTHO05D005185 2.3e-11 72.0 77 62.3
C01p00890 Brassica napus HOM05D004626 ORTHO05D005185 2.3e-11 72.0 74 58.1
BolC1t00090H Brassica oleracea HOM05D004626 ORTHO05D005185 2.3e-11 72.0 74 58.1
C07p62810 Brassica napus HOM05D004626 ORTHO05D005185 5.7e-10 67.4 75 58.7
Aa31LG6G15380 Aethionema arabicum HOM05D004626 ORTHO05D005185 7.5e-10 67.0 72 56.9
A03p65840 Brassica napus HOM05D004626 ORTHO05D005185 2.4e-08 62.0 73 52.1
BraA03t15636Z Brassica rapa HOM05D004626 ORTHO05D005185 2.4e-08 62.0 73 52.1
BraA02t04844Z Brassica rapa HOM05D017491 ORTHO05D005185 5.9e-07 57.4 52 57.7
BcaNung06392 Brassica carinata HOM05D004626 ORTHO05D005185 1.0e-06 56.6 74 48.6


User provided reference genes

Program Settings