Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G23670 Arabidopsis lyrata HOM05D003898 ORTHO05D004642 2.4e-168 595.5 318 100.0
AT1G12350 Arabidopsis thaliana HOM05D003898 ORTHO05D004642 1.7e-161 572.8 318 94.0
Carub.0001s1201 Capsella rubella HOM05D003898 ORTHO05D004642 1.8e-155 552.7 318 87.7
CARHR012640 Cardamine hirsuta HOM05D003898 ORTHO05D004642 4.0e-155 551.6 316 88.6
Thhalv10014147m.g Eutrema salsugineum HOM05D003898 ORTHO05D004642 7.7e-151 537.3 318 86.8
Sp6g40350 Schrenkiella parvula HOM05D003898 ORTHO05D004642 2.5e-149 532.3 318 85.8
C09p74420 Brassica napus HOM05D003898 ORTHO05D004642 9.2e-144 513.8 315 82.2
BcaNung04450 Brassica carinata HOM05D003898 ORTHO05D004642 1.2e-143 513.5 315 82.5
BolC9t60175H Brassica oleracea HOM05D003898 ORTHO05D004642 4.5e-143 511.5 315 82.5
BraA02t04709Z Brassica rapa HOM05D003898 ORTHO05D004642 1.7e-142 509.6 325 81.5
A10p33510 Brassica napus HOM05D003898 ORTHO05D004642 3.3e-141 505.4 310 82.9
C02p00370 Brassica napus HOM05D003898 ORTHO05D004642 1.6e-140 503.1 319 81.5
BcaNung06026 Brassica carinata HOM05D003898 ORTHO05D004642 1.2e-138 496.9 320 80.9
BraA10t45381Z Brassica rapa HOM05D003898 ORTHO05D004642 2.0e-138 496.1 336 76.5
THA.LOC104813137 Tarenaya hassleriana HOM05D003898 ORTHO05D004642 4.3e-133 478.4 330 75.2
Aa31LG9G14440 Aethionema arabicum HOM05D003898 ORTHO05D004642 1.0e-126 457.2 296 79.1
Duzib093G1469 Durio zibethinus HOM05D003898 ORTHO05D004642 4.6e-119 431.8 316 69.3
Gorai.002G220000 Gossypium raimondii HOM05D003898 ORTHO05D004642 7.3e-117 424.5 315 68.6
Gohir.D01G182400 Gossypium hirsutum HOM05D003898 ORTHO05D004642 1.2e-116 423.7 315 68.6
Thecc.08G115200 Theobroma cacao HOM05D003898 ORTHO05D004642 1.2e-116 423.7 315 67.6
COL.COLO4_16517 Corchorus olitorius HOM05D003898 ORTHO05D004642 2.8e-116 422.5 313 68.4
Gohir.A01G187300 Gossypium hirsutum HOM05D003898 ORTHO05D004642 8.1e-116 421.0 309 69.3
Cpa.g.sc49.114 Carica papaya HOM05D003898 ORTHO05D004642 3.4e-114 415.6 315 66.7
Manes.02G157700 Manihot esculenta HOM05D003898 ORTHO05D004642 1.7e-113 413.3 318 64.5
RcHm_v2.0_Chr7g0240421 Rosa chinensis HOM05D003898 ORTHO05D004642 1.2e-111 407.1 311 64.3
QL12p035494 Quercus lobata HOM05D003898 ORTHO05D004642 3.5e-111 405.6 309 65.4
FvH4_5g38420 Fragaria vesca HOM05D003898 ORTHO05D004642 6.0e-111 404.8 311 64.0
Ciclev10005436m.g Citrus clementina HOM05D003898 ORTHO05D004642 3.0e-110 402.5 311 65.3
PGR044G1262 Punica granatum HOM05D003898 ORTHO05D004642 3.9e-110 402.1 310 64.8
TAR625G0437 Trochodendron aralioides HOM05D003898 ORTHO05D004642 8.7e-110 401.0 307 65.1
CiPaw.06G023700 Carya illinoinensis HOM05D003898 ORTHO05D004642 2.5e-109 399.4 308 64.9
Prupe.1G507900 Prunus persica HOM05D003898 ORTHO05D004642 1.2e-108 397.1 310 64.2
GSVIVG01008958001 Vitis vinifera HOM05D003898 ORTHO05D004642 1.6e-108 396.7 309 64.4
Sopen12g029520 Solanum pennellii HOM05D003898 ORTHO05D004642 2.1e-108 396.4 303 65.0
Potri.002G090500 Populus trichocarpa HOM05D003898 ORTHO05D004642 2.8e-108 396.0 311 64.3
RcHm_v2.0_Chr1g0340891 Rosa chinensis HOM05D003898 ORTHO05D004642 2.8e-108 396.0 313 62.9
Aqoxy2G00480 Aquilegia oxysepala HOM05D003898 ORTHO05D004642 1.1e-107 394.0 312 62.5
Sed0026073 Sechium edule HOM05D003898 ORTHO05D004642 1.8e-107 393.3 314 61.1
ClCG08G010840 Citrullus lanatus HOM05D003898 ORTHO05D004642 2.4e-107 392.9 316 61.7
Solyc12g056840.2 Solanum lycopersicum HOM05D003898 ORTHO05D004642 2.4e-107 392.9 303 64.7
TWI12G0005 Tripterygium wilfordii HOM05D003898 ORTHO05D004642 2.4e-107 392.9 307 64.8
Sc16g0001430 Simmondsia chinensis HOM05D003898 ORTHO05D004642 3.1e-107 392.5 316 61.4
Dinv13069 Davidia involucrata HOM05D003898 ORTHO05D004642 9.0e-107 391.0 312 63.8
PGSC0003DMG401016958 Solanum tuberosum HOM05D003898 ORTHO05D004642 1.2e-106 390.6 303 64.0
HanXRQChr05g0162311 Helianthus annuus HOM05D003898 ORTHO05D004642 2.6e-106 389.4 320 61.9
vmacro04776 Vaccinium macrocarpon HOM05D003898 ORTHO05D004642 2.6e-106 389.4 314 63.4
CSS0037064 Camellia sinensis var. sinensis HOM05D003898 ORTHO05D004642 3.4e-106 389.0 306 64.1
CANSAT25G0948 Cannabis sativa HOM05D003898 ORTHO05D004642 4.4e-106 388.7 304 65.1
MSTRG.24959 Avicennia marina HOM05D003898 ORTHO05D004642 7.6e-106 387.9 304 62.8
CsaV3_6G035700 Cucumis sativus L. HOM05D003898 ORTHO05D004642 7.6e-106 387.9 307 62.5
Nitab4.5_0000425g0260 Nicotiana tabacum HOM05D003898 ORTHO05D004642 1.3e-105 387.1 305 64.6
Actinidia33168 Actinidia chinensis HOM05D003898 ORTHO05D004642 1.7e-105 386.7 313 63.3
Ca_02530_v3 Cicer arietinum L. HOM05D003898 ORTHO05D004642 1.7e-105 386.7 310 62.3
ECA246G0783 Erigeron canadensis HOM05D003898 ORTHO05D004642 1.7e-105 386.7 306 63.7
Lalb_Chr08g0241771 Lupinus albus HOM05D003898 ORTHO05D004642 1.7e-105 386.7 313 62.0
SGA_v2.0_scaffold11G05890 Striga asiatica HOM05D003898 ORTHO05D004642 2.2e-105 386.3 304 63.5
HanXRQChr01g0001161 Helianthus annuus HOM05D003898 ORTHO05D004642 2.9e-105 386.0 320 61.6
FvH4_7g08221 Fragaria vesca HOM05D003898 ORTHO05D004642 3.8e-105 385.6 267 68.9
MD08G1174000 Malus domestica HOM05D003898 ORTHO05D004642 3.8e-105 385.6 309 63.4
Medtr4g112080 Medicago truncatula HOM05D003898 ORTHO05D004642 6.4e-105 384.8 310 61.6
Migut.C00215 Erythranthe guttata HOM05D003898 ORTHO05D004642 1.1e-104 384.0 303 62.7
DCAR_028260 Daucus carota HOM05D003898 ORTHO05D004642 1.4e-104 383.6 307 62.9
Lalb_Chr11g0065591 Lupinus albus HOM05D003898 ORTHO05D004642 1.9e-104 383.3 310 62.3
Rhsim07G0198900 Rhododendron simsii HOM05D003898 ORTHO05D004642 2.4e-104 382.9 317 61.5
CSS0048138 Camellia sinensis var. sinensis HOM05D003898 ORTHO05D004642 3.2e-104 382.5 311 61.1
MELO3C011378.2 Cucumis melo HOM05D003898 ORTHO05D004642 4.2e-104 382.1 307 61.9
CiPaw.05G230800 Carya illinoinensis HOM05D003898 ORTHO05D004642 5.4e-104 381.7 308 63.0
Psat5g107440 Pisum sativum HOM05D003898 ORTHO05D004642 7.1e-104 381.3 310 61.6
FAN13G1941 Fragaria x ananassa HOM05D003898 ORTHO05D004642 1.2e-103 380.6 338 58.0
FAN08G2468 Fragaria x ananassa HOM05D003898 ORTHO05D004642 2.7e-103 379.4 330 58.5
Potri.005G170600 Populus trichocarpa HOM05D003898 ORTHO05D004642 2.7e-103 379.4 310 62.6
TPR.G26798 Trifolium pratense HOM05D003898 ORTHO05D004642 3.5e-103 379.0 310 61.0
Peaxi162Scf00160g01643 Petunia axillaris HOM05D003898 ORTHO05D004642 7.8e-103 377.9 305 62.6
Lj1g0002951 Lotus japonicus HOM05D003898 ORTHO05D004642 1.0e-102 377.5 310 62.3
Sabra02G0071500 Salix brachista HOM05D003898 ORTHO05D004642 1.3e-102 377.1 325 59.7
Glyma.06G107500 Glycine max HOM05D003898 ORTHO05D004642 3.0e-102 375.9 310 60.0
Lj4C109T16 Lonicera japonica HOM05D003898 ORTHO05D004642 6.6e-102 374.8 335 58.8
Glyma.04G254600 Glycine max HOM05D003898 ORTHO05D004642 1.1e-101 374.0 306 61.4
Lsat_1_v5_gn_9_70200 Lactuca sativa HOM05D003898 ORTHO05D004642 1.9e-101 373.2 305 62.6
CDE10G0849 Ceratophyllum demersum HOM05D003898 ORTHO05D004642 2.5e-101 372.9 309 62.5
EL10Ac6g15432 Beta vulgaris HOM05D003898 ORTHO05D004642 3.3e-101 372.5 306 61.8
PSO210G6710 Papaver somniferum HOM05D003898 ORTHO05D004642 7.3e-101 371.3 308 61.7
CAN.G47.19 Capsicum annuum HOM05D003898 ORTHO05D004642 1.6e-100 370.2 330 58.2
Medtr3g073550 Medicago truncatula HOM05D003898 ORTHO05D004642 2.8e-100 369.4 308 59.7
VMungo1309G1855 Vigna mungo HOM05D003898 ORTHO05D004642 3.6e-100 369.0 308 60.4
TPR.G32957 Trifolium pratense HOM05D003898 ORTHO05D004642 8.1e-100 367.9 310 60.0
CAN.G617.2 Capsicum annuum HOM05D003898 ORTHO05D004642 1.4e-99 367.1 312 58.7
PSO447G0107 Papaver somniferum HOM05D003898 ORTHO05D004642 1.4e-99 367.1 308 61.0
Sopen04g028670 Solanum pennellii HOM05D003898 ORTHO05D004642 2.4e-99 366.3 308 59.1
Cfa015947 Carpinus fangiana HOM05D003898 ORTHO05D004642 3.1e-99 365.9 270 66.7
Haze_00543 Corylus avellana HOM05D003898 ORTHO05D004642 3.1e-99 365.9 332 57.5
Phvul.009G026700 Phaseolus vulgaris HOM05D003898 ORTHO05D004642 5.3e-99 365.2 311 59.2
AL6G11300 Arabidopsis lyrata HOM05D003898 ORTHO05D004642 2.0e-98 363.2 202 90.6
arahy.Tifrunner.gnm1.ann1.K1QIEY Arachis hypogaea HOM05D003898 ORTHO05D004642 4.5e-98 362.1 353 54.1
AUR62019012 Chenopodium quinoa HOM05D003898 ORTHO05D004642 4.5e-98 362.1 307 60.9
Cc10_g06070 Coffea canephora HOM05D003898 ORTHO05D004642 5.8e-98 361.7 272 65.4
Nitab4.5_0006745g0040 Nicotiana tabacum HOM05D003898 ORTHO05D004642 1.7e-97 360.1 375 53.3
arahy.Tifrunner.gnm1.ann1.PF76WK Arachis hypogaea HOM05D003898 ORTHO05D004642 2.2e-97 359.8 269 65.8
TAR381G1034 Trochodendron aralioides HOM05D003898 ORTHO05D004642 6.4e-97 358.2 277 65.3
AUR62027853 Chenopodium quinoa HOM05D003898 ORTHO05D004642 8.4e-97 357.8 306 60.8
Lsat_1_v5_gn_6_68860 Lactuca sativa HOM05D003898 ORTHO05D004642 1.9e-96 356.7 272 65.8
arahy.Tifrunner.gnm1.ann1.HG05DD Arachis hypogaea HOM05D003898 ORTHO05D004642 2.4e-96 356.3 269 65.1
CANSAT01G0632 Cannabis sativa HOM05D003898 ORTHO05D004642 9.3e-96 354.4 310 61.6
Solyc04g072480.3 Solanum lycopersicum HOM05D003898 ORTHO05D004642 4.6e-95 352.1 338 54.7
RcHm_v2.0_Chr1g0340911 Rosa chinensis HOM05D003898 ORTHO05D004642 1.3e-94 350.5 252 67.9
arahy.Tifrunner.gnm1.ann1.Z23D3B Arachis hypogaea HOM05D003898 ORTHO05D004642 1.1e-93 347.4 278 62.9
FvH4_5g38402 Fragaria vesca HOM05D003898 ORTHO05D004642 9.6e-93 344.4 241 67.2
HPP92_006004 Vanilla planifolia HOM05D003898 ORTHO05D004642 1.6e-92 343.6 317 56.8
Oeu038191.1 Olea europaea HOM05D003898 ORTHO05D004642 2.8e-92 342.8 267 65.2
FAN01G1002 Fragaria x ananassa HOM05D000001 ORTHO05D000003 1.1e-91 340.9 312 56.7
Os02g0575200 Oryza sativa ssp. japonica HOM05D003898 ORTHO05D004642 1.4e-91 340.5 307 57.0
Os08g0176100 Oryza sativa ssp. japonica HOM05D003898 ORTHO05D004642 2.6e-90 336.3 307 56.0
Zm00001eb414730 Zea mays HOM05D003898 ORTHO05D004642 6.4e-89 331.6 310 55.2
SEGI_30417 Sequoiadendron giganteum HOM05D003898 ORTHO05D004642 9.3e-88 327.8 308 55.8
Zm00001eb182920 Zea mays HOM05D003898 ORTHO05D004642 1.2e-87 327.4 304 55.6
Nitab4.5_0001307g0170 Nicotiana tabacum HOM05D003898 ORTHO05D004642 6.0e-87 325.1 306 55.6
Nn1g05207 Nelumbo nucifera HOM05D003898 ORTHO05D004642 1.5e-85 320.5 234 65.8
Pp3c11_3000 Physcomitrium patens HOM05D003898 ORTHO05D004642 1.5e-85 320.5 260 59.6
Solyc10g011840.3 Solanum lycopersicum HOM05D003898 ORTHO05D004642 2.8e-84 316.2 313 54.0
Duzib116G0208 Durio zibethinus HOM05D003898 ORTHO05D004642 2.4e-83 313.2 316 55.4
CSS0031031 Camellia sinensis var. sinensis HOM05D003898 ORTHO05D004642 6.9e-83 311.6 309 52.8
Mapoly0004s0284 Marchantia polymorpha HOM05D003898 ORTHO05D004642 1.5e-82 310.5 309 52.4
AT5G02080 Arabidopsis thaliana HOM05D003898 ORTHO05D004642 1.7e-81 307.0 189 84.1
SalBow7G2097 Salvia bowleyana HOM05D003898 ORTHO05D004642 3.8e-81 305.8 309 54.0
MD15G1360400 Malus domestica HOM05D003898 ORTHO05D004642 4.1e-75 285.8 226 68.6
BolC2t06037H Brassica oleracea HOM05D003898 ORTHO05D004642 5.9e-74 282.0 174 83.9
FAN06G3434 Fragaria x ananassa HOM05D000001 ORTHO05D000003 8.5e-73 278.1 315 47.0
ATR0564G227 Amborella trichopoda HOM05D003898 ORTHO05D004642 3.3e-69 266.2 231 58.4
SMO137G0130 Selaginella moellendorffii HOM05D003898 ORTHO05D004642 4.8e-68 262.3 266 52.3
ClCG08G002640 Citrullus lanatus HOM05D003898 ORTHO05D004642 1.9e-64 250.4 448 37.3
SalBow1G7967 Salvia bowleyana HOM05D003898 ORTHO05D004642 2.3e-62 243.4 300 45.3
CDE10G0276 Ceratophyllum demersum HOM05D003898 ORTHO05D004642 2.8e-60 236.5 161 70.8
Cre01.g048050 Chlamydomonas reinhardtii HOM05D003898 ORTHO05D004642 4.8e-60 235.7 301 45.2
PRCOL_00003493 Prasinoderma coloniale HOM05D003898 ORTHO05D004642 1.5e-58 230.7 291 44.7
PGSC0003DMG400027542 Solanum tuberosum HOM05D003898 ORTHO05D004642 7.2e-56 221.9 188 60.1
SMO137G0020 Selaginella moellendorffii HOM05D003898 ORTHO05D004642 5.2e-54 215.7 226 52.7
FAN04G1035 Fragaria x ananassa HOM05D003898 ORTHO05D004642 7.4e-53 211.8 207 54.1
Atru.chr13.1300 Acer truncatum HOM05D003898 ORTHO05D004642 1.3e-52 211.1 173 63.0
AagrBONN_evm.TU.Sc2ySwM_344.1574 Anthoceros agrestis HOM05D003898 ORTHO05D004642 3.7e-52 209.5 192 52.6
Nitab4.5_0000553g0060 Nicotiana tabacum HOM05D003898 ORTHO05D004642 3.1e-51 206.5 233 49.4
Dinv44720 Davidia involucrata HOM05D003898 ORTHO05D004642 1.0e-49 201.4 164 64.0
Psat4g046560 Pisum sativum HOM05D003898 ORTHO05D011365 1.7e-49 200.7 171 60.8
MCO09G707 Micromonas commoda HOM05D003898 ORTHO05D004642 2.5e-48 196.8 287 40.4
DCAR_027594 Daucus carota HOM05D003898 ORTHO05D004642 1.4e-46 191.0 214 49.1
Sopen10g005660 Solanum pennellii HOM05D003898 ORTHO05D004642 1.4e-46 191.0 221 45.2
SMO137G0337 Selaginella moellendorffii HOM05D003898 ORTHO05D004642 3.0e-46 189.9 211 47.9
Atru.chr13.1301 Acer truncatum HOM05D003898 ORTHO05D004642 4.0e-46 189.5 137 68.6
Cfa024377 Carpinus fangiana HOM05D003898 ORTHO05D004642 4.8e-44 182.6 297 41.1
Eucgr.F04382 Eucalyptus grandis HOM05D003898 ORTHO05D004642 1.6e-42 177.6 148 58.1
Atru.chr4.493 Acer truncatum HOM05D003898 ORTHO05D004642 7.7e-42 175.3 119 71.4
Atru.chr1.2069 Acer truncatum HOM05D003898 ORTHO05D004642 5.0e-41 172.6 115 73.0
Ca_25770_v3 Cicer arietinum L. HOM05D003898 ORTHO05D004642 1.5e-40 171.0 172 51.7
unitig_32.g11143 Utricularia gibba HOM05D003898 ORTHO05D004642 1.6e-39 167.5 132 62.9
Lj4C710T9 Lonicera japonica HOM05D003898 ORTHO05D004642 2.3e-38 163.7 140 57.1
FAN18G1940 Fragaria x ananassa HOM05D003898 ORTHO05D004642 7.5e-37 158.7 195 45.6
CBR_g9000 Chara braunii HOM05D003898 ORTHO05D004642 8.3e-36 155.2 169 46.7
arahy.Tifrunner.gnm1.ann1.Z5SK82 Arachis hypogaea HOM05D003898 ORTHO05D004642 3.5e-34 149.8 181 47.5
SEGI_10597 Sequoiadendron giganteum HOM05D003898 ORTHO05D004642 1.6e-31 141.0 149 52.3
Duzib041G0680 Durio zibethinus HOM05D003898 ORTHO05D004642 6.1e-31 139.0 106 65.1
arahy.Tifrunner.gnm1.ann1.N7W281 Arachis hypogaea HOM05D003898 ORTHO05D004642 1.3e-28 131.3 152 50.7
CBR_g9001 Chara braunii HOM05D003898 ORTHO05D004642 7.3e-24 115.5 113 54.0
Aqoxy480s002 Aquilegia oxysepala HOM05D003898 ORTHO05D004642 1.4e-22 111.3 124 48.4
unitig_32.g11144 Utricularia gibba HOM05D003898 ORTHO05D004642 3.1e-22 110.2 116 54.3
arahy.Tifrunner.gnm1.ann1.9J7JQ6 Arachis hypogaea HOM05D003898 ORTHO05D004642 6.0e-18 95.9 58 75.9
Aqoxy5G01116 Aquilegia oxysepala HOM05D003898 ORTHO05D004642 9.8e-13 78.6 45 80.0
arahy.Tifrunner.gnm1.ann1.KW4E90 Arachis hypogaea HOM05D003898 ORTHO05D004642 2.4e-11 73.9 92 45.7
Peaxi162Scf00756g00110 Petunia axillaris HOM05D003898 ORTHO05D004642 3.2e-11 73.6 90 42.2
QL10p044069 Quercus lobata HOM05D003898 ORTHO05D004642 7.0e-11 72.4 81 46.9
QL02p062685 Quercus lobata HOM05D003898 ORTHO05D004642 2.1e-10 70.9 81 45.7
Atru.chr5.2810 Acer truncatum HOM05D003898 ORTHO05D004642 2.1e-07 60.8 54 55.6


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