Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G23450 Arabidopsis lyrata HOM05D037278 ORTHO05D031405 4.2e-62 241.1 116 100.0
AT1G12180 Arabidopsis thaliana HOM05D037278 ORTHO05D031405 3.8e-39 164.9 120 68.3
Carub.0001s1085 Capsella rubella HOM05D037278 ORTHO05D031405 1.3e-18 96.7 113 49.6
AT5G47600 Arabidopsis thaliana HOM05D009070 ORTHO05D010560 5.9e-08 61.2 75 40.0
AL8G10370 Arabidopsis lyrata HOM05D009070 ORTHO05D010560 8.6e-07 57.4 75 37.3
A06p44940 Brassica napus HOM05D009070 ORTHO05D010560 8.6e-07 57.4 77 39.0
C07p31240 Brassica napus HOM05D009070 ORTHO05D010560 8.6e-07 57.4 77 39.0
BolC7t43665H Brassica oleracea HOM05D009070 ORTHO05D010560 8.6e-07 57.4 77 39.0
BraA06t27365Z Brassica rapa HOM05D009070 ORTHO05D010560 8.6e-07 57.4 77 39.0
CARHR173750 Cardamine hirsuta HOM05D009070 ORTHO05D010560 8.6e-07 57.4 75 36.0
C07p30530 Brassica napus HOM05D009070 ORTHO05D010560 1.1e-06 57.0 77 40.3
BolC7t43595H Brassica oleracea HOM05D009070 ORTHO05D010560 1.1e-06 57.0 77 40.3
BcaC06g34305 Brassica carinata HOM05D009070 ORTHO05D010560 1.5e-06 56.6 77 40.3
BcaC03g16907 Brassica carinata HOM05D009070 ORTHO05D010560 4.2e-06 55.1 78 39.7
C02p48100 Brassica napus HOM05D009070 ORTHO05D010560 4.2e-06 55.1 78 39.7
BolC2t10841H Brassica oleracea HOM05D009070 ORTHO05D010560 4.2e-06 55.1 78 39.7
Carub.0008s0019 Capsella rubella HOM05D009070 ORTHO05D010560 4.2e-06 55.1 113 33.6
BcaC06g31365 Brassica carinata HOM05D009070 ORTHO05D010560 5.5e-06 54.7 77 36.4


User provided reference genes

Program Settings