Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G23320 Arabidopsis lyrata HOM05D007926 ORTHO05D009983 2.1e-58 228.8 112 100.0
Carub.0001s1175 Capsella rubella HOM05D007926 ORTHO05D009983 1.5e-48 196.1 113 85.8
CARHR012430 Cardamine hirsuta HOM05D007926 ORTHO05D009983 6.9e-46 187.2 112 83.0
Sp1g10740 Schrenkiella parvula HOM05D007926 ORTHO05D009983 2.6e-45 185.3 114 80.7
Thhalv10009916m.g Eutrema salsugineum HOM05D007926 ORTHO05D009983 5.9e-45 184.1 115 80.0
BraA08t35224Z Brassica rapa HOM05D007926 ORTHO05D009983 8.5e-44 180.3 115 79.1
BcaC07g41751 Brassica carinata HOM05D007926 ORTHO05D009983 7.2e-43 177.2 112 78.6
A08p33040 Brassica napus HOM05D007926 ORTHO05D009983 9.3e-43 176.8 115 77.4
BcaB02g06430 Brassica carinata HOM05D007926 ORTHO05D009983 1.2e-42 176.4 114 78.9
A06p09430 Brassica napus HOM05D007926 ORTHO05D009983 1.2e-42 176.4 114 78.1
BraA06t24128Z Brassica rapa HOM05D007926 ORTHO05D009983 1.2e-42 176.4 114 78.1
AT1G12064 Arabidopsis thaliana HOM05D007926 ORTHO05D009983 3.6e-42 174.9 112 82.1
BcaB08g37432 Brassica carinata HOM05D007926 ORTHO05D009983 1.8e-41 172.6 110 78.2
BcaC07g41734 Brassica carinata HOM05D007926 ORTHO05D009983 1.8e-41 172.6 110 78.2
BcaC07g41735 Brassica carinata HOM05D007926 ORTHO05D009983 1.8e-41 172.6 110 78.2
BcaC05g25224 Brassica carinata HOM05D007926 ORTHO05D009983 3.9e-41 171.4 114 75.4
C05p11100 Brassica napus HOM05D007926 ORTHO05D009983 3.9e-41 171.4 114 75.4
BolC5t29857H Brassica oleracea HOM05D007926 ORTHO05D009983 3.9e-41 171.4 114 75.4
A09p64120 Brassica napus HOM05D007926 ORTHO05D009983 4.3e-40 167.9 106 79.2
BraA09t41758Z Brassica rapa HOM05D007926 ORTHO05D009983 4.3e-40 167.9 106 79.2
BolC8t52311H Brassica oleracea HOM05D007926 ORTHO05D009983 3.7e-39 164.9 106 77.4
C08p47740 Brassica napus HOM05D007926 ORTHO05D009983 4.8e-39 164.5 106 77.4
Aa31LG1G2660 Aethionema arabicum HOM05D007926 ORTHO05D009983 5.3e-38 161.0 109 73.4
THA.LOC104809471 Tarenaya hassleriana HOM05D007926 ORTHO05D009983 1.8e-25 119.4 70 78.6
BcaB02g06429 Brassica carinata HOM05D007926 ORTHO05D009983 4.1e-22 108.2 78 71.8
Ciclev10017269m.g Citrus clementina HOM05D007926 ORTHO05D009983 2.2e-20 102.4 108 44.4
Potri.006G009500 Populus trichocarpa HOM05D007926 ORTHO05D009983 3.8e-20 101.7 101 50.5
Sabra06G0007300 Salix brachista HOM05D007926 ORTHO05D009983 1.5e-19 99.8 99 49.5
TWI63G0020 Tripterygium wilfordii HOM05D007926 ORTHO05D009983 4.2e-19 98.2 101 47.5
CiPaw.09G102200 Carya illinoinensis HOM05D007926 ORTHO05D009983 1.6e-18 96.3 97 48.5
Hma1.2p1_0700F.1_g205740 Hydrangea macrophylla HOM05D007926 ORTHO05D009983 8.0e-18 94.0 111 37.8
Gohir.A10G009400 Gossypium hirsutum HOM05D007926 ORTHO05D009983 1.0e-17 93.6 93 47.3
FAN21G0219 Fragaria x ananassa HOM05D007926 ORTHO05D009983 1.4e-17 93.2 103 45.6
Atru.chr1.2458 Acer truncatum HOM05D007926 ORTHO05D009983 1.8e-17 92.8 96 44.8
FvH4_3g01020 Fragaria vesca HOM05D007926 ORTHO05D009983 1.8e-17 92.8 103 45.6
Duzib192G0081 Durio zibethinus HOM05D007926 ORTHO05D009983 4.0e-17 91.7 73 52.1
FAN25G3056 Fragaria x ananassa HOM05D007926 ORTHO05D009983 6.7e-17 90.9 103 44.7
TAR627G0241 Trochodendron aralioides HOM05D007926 ORTHO05D009983 6.7e-17 90.9 98 44.9
Gohir.D06G216000 Gossypium hirsutum HOM05D007926 ORTHO05D009983 1.2e-16 90.1 112 42.0
Prupe.4G010900 Prunus persica HOM05D007926 ORTHO05D009983 1.2e-16 90.1 104 42.3
Gorai.011G009900 Gossypium raimondii HOM05D007926 ORTHO05D009983 1.5e-16 89.7 98 45.9
CANSAT56G0946 Cannabis sativa HOM05D007926 ORTHO05D009983 2.0e-16 89.4 98 42.9
Cfa000107 Carpinus fangiana HOM05D007926 ORTHO05D009983 2.0e-16 89.4 97 45.4
Gorai.010G250100 Gossypium raimondii HOM05D007926 ORTHO05D009983 3.3e-16 88.6 111 41.4
PGR042G0446 Punica granatum HOM05D007926 ORTHO05D009983 3.3e-16 88.6 98 43.9
Manes.13G107300 Manihot esculenta HOM05D007926 ORTHO05D009983 5.7e-16 87.8 98 44.9
RhsimUnG0109600 Rhododendron simsii HOM05D007926 ORTHO05D009983 5.7e-16 87.8 104 43.3
Rhsim13G0146200 Rhododendron simsii HOM05D007926 ORTHO05D009983 1.3e-15 86.7 104 42.3
CSS0027622 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 1.7e-15 86.3 104 43.3
Gohir.A06G205500 Gossypium hirsutum HOM05D007926 ORTHO05D009983 2.2e-15 85.9 112 40.2
Manes.09G070200 Manihot esculenta HOM05D007926 ORTHO05D009983 2.2e-15 85.9 93 41.9
Gohir.D10G009100 Gossypium hirsutum HOM05D007926 ORTHO05D009983 4.8e-15 84.7 103 41.7
Migut.H01604 Erythranthe guttata HOM05D007926 ORTHO05D009983 6.3e-15 84.3 72 48.6
Lalb_Chr18g0056941 Lupinus albus HOM05D007926 ORTHO05D009983 6.3e-15 84.3 94 43.6
arahy.Tifrunner.gnm1.ann1.I7SJA3 Arachis hypogaea HOM05D007926 ORTHO05D009983 1.8e-14 82.8 95 37.9
Oeu002767.1 Olea europaea HOM05D007926 ORTHO05D009983 1.8e-14 82.8 105 41.0
RcHm_v2.0_Chr5g0001551 Rosa chinensis HOM05D007926 ORTHO05D009983 7.0e-14 80.9 82 45.1
AUR62021866 Chenopodium quinoa HOM05D007926 ORTHO05D009983 9.1e-14 80.5 108 39.8
Eucgr.E03949 Eucalyptus grandis HOM05D007926 ORTHO05D009983 9.1e-14 80.5 98 40.8
Phvul.006G143300 Phaseolus vulgaris HOM05D007926 ORTHO05D009983 9.1e-14 80.5 73 49.3
MD10G1331300 Malus domestica HOM05D007926 ORTHO05D009983 1.2e-13 80.1 95 40.0
Glyma.15G114500 Glycine max HOM05D007926 ORTHO05D009983 3.5e-13 78.6 108 38.0
Sc05g0009590 Simmondsia chinensis HOM05D007926 ORTHO05D009983 3.5e-13 78.6 100 45.0
Nn1g03317 Nelumbo nucifera HOM05D007926 ORTHO05D009983 7.7e-13 77.4 74 48.6
Solyc04g014750.1 Solanum lycopersicum HOM05D007926 ORTHO05D009983 1.3e-12 76.6 101 40.6
Sopen04g006860 Solanum pennellii HOM05D007926 ORTHO05D009983 1.3e-12 76.6 101 40.6
PGSC0003DMG400023652 Solanum tuberosum HOM05D007926 ORTHO05D009983 1.3e-12 76.6 111 34.2
DCAR_002220 Daucus carota HOM05D007926 ORTHO05D009983 2.2e-12 75.9 113 38.1
ATR0712G022 Amborella trichopoda HOM05D007926 ORTHO05D009983 3.8e-12 75.1 69 47.8
TPR.G13087 Trifolium pratense HOM05D007926 ORTHO05D009983 1.9e-11 72.8 104 40.4
Sed0015463 Sechium edule HOM05D007926 ORTHO05D009983 4.2e-11 71.6 70 47.1
SGA_v2.0_scaffold89G27497 Striga asiatica HOM05D007926 ORTHO05D009983 4.2e-11 71.6 101 34.7
CSS0041628 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 7.2e-11 70.9 91 38.5
BolC8t49147H Brassica oleracea HOM05D007926 ORTHO05D009983 3.6e-10 68.6 37 86.5
HanXRQChr15g0470111 Helianthus annuus HOM05D007926 ORTHO05D009983 6.1e-10 67.8 89 37.1
Eucgr.E03934 Eucalyptus grandis HOM05D007926 ORTHO05D009983 8.0e-10 67.4 69 44.9
CSS0047308 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 1.2e-08 63.5 96 35.4
MELO3C021682.2 Cucumis melo HOM05D007926 ORTHO05D009983 2.6e-08 62.4 66 42.4
Lj6g0017055 Lotus japonicus HOM05D007926 ORTHO05D009983 7.5e-08 60.8 93 37.6
ClCG01G010240 Citrullus lanatus HOM05D007926 ORTHO05D009983 1.3e-07 60.1 66 43.9
DCAR_004887 Daucus carota HOM05D000701 ORTHO05D000531 1.4e-06 56.6 46 43.5


User provided reference genes

Program Settings