Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G21760 Arabidopsis lyrata HOM05D006606 ORTHO05D008429 6.1e-208 727.2 367 100.0
AT1G10830 Arabidopsis thaliana HOM05D006606 ORTHO05D008429 1.3e-202 709.5 368 97.3
Carub.0001s1037 Capsella rubella HOM05D006606 ORTHO05D008429 4.4e-198 694.5 367 94.6
Thhalv10007996m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 1.1e-193 679.9 367 92.6
CARHR011050 Cardamine hirsuta HOM05D006606 ORTHO05D008429 2.1e-192 675.6 367 92.1
Sp1g09530 Schrenkiella parvula HOM05D006606 ORTHO05D008429 2.2e-186 655.6 367 90.2
C05p09200 Brassica napus HOM05D006606 ORTHO05D008429 2.6e-182 642.1 368 88.3
BolC5t29661H Brassica oleracea HOM05D000246 ORTHO05D005907 5.7e-182 641.0 368 88.3
A06p07610 Brassica napus HOM05D006606 ORTHO05D008429 9.2e-180 633.6 367 88.0
BraA06t23963Z Brassica rapa HOM05D006606 ORTHO05D008429 9.2e-180 633.6 367 88.0
Aa31LG1G4020 Aethionema arabicum HOM05D006606 ORTHO05D008429 4.4e-174 614.8 367 83.1
BcaC05g24964 Brassica carinata HOM05D006606 ORTHO05D008429 3.9e-170 601.7 367 84.2
THA.LOC104823658 Tarenaya hassleriana HOM05D006606 ORTHO05D008429 1.7e-154 549.7 366 75.1
SalBow6G4530 Salvia bowleyana HOM05D006606 ORTHO05D008429 1.4e-143 513.5 375 70.7
Solyc12g098710.2 Solanum lycopersicum HOM05D006606 ORTHO05D008429 3.4e-142 508.8 299 80.3
PGSC0003DMG401004586 Solanum tuberosum HOM05D006606 ORTHO05D008429 3.4e-142 508.8 299 79.9
Cpa.g.sc8.304 Carica papaya HOM05D006606 ORTHO05D008429 4.4e-142 508.4 333 73.6
Potri.014G146900 Populus trichocarpa HOM05D006606 ORTHO05D008429 9.9e-142 507.3 372 68.3
FAN12G1058 Fragaria x ananassa HOM05D006606 ORTHO05D008429 1.7e-141 506.5 350 70.6
FAN12G2609 Fragaria x ananassa HOM05D006606 ORTHO05D008429 1.7e-141 506.5 350 70.6
arahy.Tifrunner.gnm1.ann1.B1TKD1 Arachis hypogaea HOM05D006606 ORTHO05D008429 2.9e-141 505.8 299 78.6
FvH4_4g12260 Fragaria vesca HOM05D006606 ORTHO05D008429 4.9e-141 505.0 350 70.3
arahy.Tifrunner.gnm1.ann1.V8KL47 Arachis hypogaea HOM05D006606 ORTHO05D008429 8.4e-141 504.2 299 78.3
Hma1.2p1_1286F.1_g273130 Hydrangea macrophylla HOM05D006606 ORTHO05D008429 1.9e-140 503.1 369 68.0
MSTRG.21987 Avicennia marina HOM05D006606 ORTHO05D008429 2.4e-140 502.7 362 70.2
Dinv22706 Davidia involucrata HOM05D006606 ORTHO05D008429 3.2e-140 502.3 340 72.1
Rhsim02G0071700 Rhododendron simsii HOM05D006606 ORTHO05D008429 3.2e-140 502.3 365 69.0
FAN22G0658 Fragaria x ananassa HOM05D006606 ORTHO05D008429 4.2e-140 501.9 325 73.5
CAN.G484.128 Capsicum annuum HOM05D006606 ORTHO05D008429 7.1e-140 501.1 296 79.4
Nitab4.5_0006519g0030 Nicotiana tabacum HOM05D006606 ORTHO05D008429 1.2e-139 500.4 292 80.5
Ah.04g149880 Amaranthus hybridus HOM05D006606 ORTHO05D008429 1.6e-139 500.0 300 76.7
Ciclev10020648m.g Citrus clementina HOM05D006606 ORTHO05D008429 2.1e-139 499.6 291 79.7
CiPaw.03G116300 Carya illinoinensis HOM05D006606 ORTHO05D008429 2.7e-139 499.2 378 66.7
FAN17G1362 Fragaria x ananassa HOM05D006606 ORTHO05D008429 2.7e-139 499.2 361 67.9
Lj4g0003716 Lotus japonicus HOM05D006606 ORTHO05D008429 6.0e-139 498.0 351 69.5
CSS0008381 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 7.8e-139 497.7 329 72.6
Migut.N00458 Erythranthe guttata HOM05D006606 ORTHO05D008429 7.8e-139 497.7 357 68.9
Duzib041G0430 Durio zibethinus HOM05D006606 ORTHO05D008429 1.0e-138 497.3 376 66.5
Glyma.11G252500 Glycine max HOM05D006606 ORTHO05D008429 1.3e-138 496.9 356 68.0
MD04G1028100 Malus domestica HOM05D006606 ORTHO05D008429 1.3e-138 496.9 376 66.8
RcHm_v2.0_Chr4g0410061 Rosa chinensis HOM05D006606 ORTHO05D008429 3.0e-138 495.7 375 66.7
Thecc.08G146500 Theobroma cacao HOM05D006606 ORTHO05D008429 3.0e-138 495.7 372 65.3
Cfa008709 Carpinus fangiana HOM05D006606 ORTHO05D008429 6.6e-138 494.6 347 70.0
Glyma.18G004400 Glycine max HOM05D006606 ORTHO05D008429 6.6e-138 494.6 329 72.3
Gohir.A02G065800 Gossypium hirsutum HOM05D006606 ORTHO05D008429 6.6e-138 494.6 360 66.9
TAR362G1133 Trochodendron aralioides HOM05D006606 ORTHO05D008429 6.6e-138 494.6 319 72.1
Gorai.005G080900 Gossypium raimondii HOM05D006606 ORTHO05D008429 8.7e-138 494.2 361 65.9
Nitab4.5_0000978g0190 Nicotiana tabacum HOM05D006606 ORTHO05D008429 8.7e-138 494.2 292 79.5
TWI09G1191 Tripterygium wilfordii HOM05D006606 ORTHO05D008429 1.1e-137 493.8 329 72.0
HanXRQChr10g0293961 Helianthus annuus HOM05D006606 ORTHO05D008429 1.5e-137 493.4 373 67.3
TPR.G18107 Trifolium pratense HOM05D006606 ORTHO05D008429 1.5e-137 493.4 331 70.4
Cc03_g10820 Coffea canephora HOM05D006606 ORTHO05D008429 1.9e-137 493.0 377 65.8
SGA_v2.0_scaffold178G39486 Striga asiatica HOM05D006606 ORTHO05D008429 1.9e-137 493.0 360 70.0
Gohir.D02G071700 Gossypium hirsutum HOM05D006606 ORTHO05D008429 2.5e-137 492.7 361 65.7
MELO3C017709.2 Cucumis melo HOM05D006606 ORTHO05D008429 3.3e-137 492.3 292 78.8
Eucgr.C03850 Eucalyptus grandis HOM05D006606 ORTHO05D008429 3.3e-137 492.3 366 66.9
GSVIVG01031662001 Vitis vinifera HOM05D006606 ORTHO05D008429 3.3e-137 492.3 290 79.0
CSS0041194 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 4.3e-137 491.9 371 66.3
AUR62020943 Chenopodium quinoa HOM05D006606 ORTHO05D008429 5.6e-137 491.5 383 64.2
ClCG07G015730 Citrullus lanatus HOM05D006606 ORTHO05D008429 7.3e-137 491.1 291 78.7
Medtr3g084950 Medicago truncatula HOM05D006606 ORTHO05D008429 7.3e-137 491.1 346 67.6
CANSAT78G0692 Cannabis sativa HOM05D006606 ORTHO05D008429 1.3e-136 490.3 298 76.2
Oeu013395.1 Olea europaea HOM05D006606 ORTHO05D008429 1.3e-136 490.3 299 77.3
QL10p044478 Quercus lobata HOM05D006606 ORTHO05D008429 1.6e-136 490.0 375 66.9
VMungo1383G1705 Vigna mungo HOM05D006606 ORTHO05D008429 2.1e-136 489.6 329 70.2
PSO017G6954 Papaver somniferum HOM05D006606 ORTHO05D008429 4.8e-136 488.4 370 65.1
Phvul.001G263600 Phaseolus vulgaris HOM05D006606 ORTHO05D008429 6.2e-136 488.0 322 70.8
Actinidia28936 Actinidia chinensis HOM05D006606 ORTHO05D008429 8.1e-136 487.6 292 79.5
CsaV3_4G003370 Cucumis sativus L. HOM05D006606 ORTHO05D008429 8.1e-136 487.6 291 78.7
Sed0006939 Sechium edule HOM05D006606 ORTHO05D008429 1.1e-135 487.3 329 69.9
Prupe.1G177500 Prunus persica HOM05D006606 ORTHO05D008429 1.8e-135 486.5 291 78.4
Sc19g0007700 Simmondsia chinensis HOM05D006606 ORTHO05D008429 2.4e-135 486.1 331 69.5
DCAR_023800 Daucus carota HOM05D006606 ORTHO05D008429 9.0e-135 484.2 315 75.6
Atru.chr3.1730 Acer truncatum HOM05D006606 ORTHO05D008429 5.8e-134 481.5 333 67.9
Lalb_Chr11g0075821 Lupinus albus HOM05D006606 ORTHO05D008429 5.8e-134 481.5 344 68.3
PSO675G4216 Papaver somniferum HOM05D006606 ORTHO05D008429 5.8e-134 481.5 373 63.8
Sabra14G0110300 Salix brachista HOM05D006606 ORTHO05D008429 5.8e-134 481.5 421 59.9
unitig_22.g6833 Utricularia gibba HOM05D006606 ORTHO05D008429 5.8e-134 481.5 299 75.3
Nn1g09788 Nelumbo nucifera HOM05D006606 ORTHO05D008429 1.3e-133 480.3 317 73.8
Oeu007220.2 Olea europaea HOM05D006606 ORTHO05D008429 1.3e-133 480.3 299 75.6
PGR119G1918 Punica granatum HOM05D006606 ORTHO05D008429 2.2e-133 479.6 352 67.9
Lsat_1_v5_gn_2_48240 Lactuca sativa HOM05D006606 ORTHO05D008429 4.9e-133 478.4 317 72.9
Psat7g076840 Pisum sativum HOM05D006606 ORTHO05D008429 1.9e-132 476.5 341 66.9
Aqoxy2G04062 Aquilegia oxysepala HOM05D006606 ORTHO05D008429 2.4e-132 476.1 343 68.8
Lalb_Chr23g0278211 Lupinus albus HOM05D006606 ORTHO05D008429 2.4e-132 476.1 351 67.0
Ca_16442_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 4.2e-132 475.3 300 73.3
Os12g0405200 Oryza sativa ssp. japonica HOM05D006606 ORTHO05D008429 4.2e-132 475.3 368 63.9
Medtr8g097190 Medicago truncatula HOM05D006606 ORTHO05D008429 3.5e-131 472.2 321 68.8
Ca_18015_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 1.3e-130 470.3 291 73.9
FAN07G1739 Fragaria x ananassa HOM05D006606 ORTHO05D008429 1.9e-129 466.5 400 60.8
Zm00001eb408760 Zea mays HOM05D006606 ORTHO05D008429 1.6e-128 463.4 372 61.8
ATR0561G173 Amborella trichopoda HOM05D006606 ORTHO05D008429 4.8e-128 461.8 371 62.3
Haze_11718 Corylus avellana HOM05D006606 ORTHO05D008429 9.9e-126 454.1 353 63.7
Pp3c1_22590 Physcomitrium patens HOM05D006606 ORTHO05D008429 1.6e-123 446.8 361 59.6
Peaxi162Scf00378g00631 Petunia axillaris HOM05D006606 ORTHO05D008429 4.6e-123 445.3 368 63.0
AagrBONN_evm.TU.Sc2ySwM_228.2148 Anthoceros agrestis HOM05D006606 ORTHO05D008429 1.0e-122 444.1 347 62.0
EL10Ac3g07392 Beta vulgaris HOM05D006606 ORTHO05D008429 2.5e-121 439.5 299 69.6
ECA238G2565 Erigeron canadensis HOM05D001656 ORTHO05D003489 4.8e-120 435.3 293 71.3
CBR_g17600 Chara braunii HOM05D006606 ORTHO05D008429 8.4e-117 424.5 304 64.8
SMO270G0095 Selaginella moellendorffii HOM05D006606 ORTHO05D008429 8.4e-117 424.5 291 65.3
AUR62018480 Chenopodium quinoa HOM05D006606 ORTHO05D008429 1.6e-115 420.2 344 61.9
Mapoly0040s0091 Marchantia polymorpha HOM05D006606 ORTHO05D008429 3.5e-115 419.1 300 65.0
Mapoly0040s0092 Marchantia polymorpha HOM05D006606 ORTHO05D008429 2.3e-114 416.4 300 64.7
Pp3c17_7640 Physcomitrium patens HOM05D006606 ORTHO05D008429 1.8e-111 406.8 291 63.9
Lj3A376T54 Lonicera japonica HOM05D006606 ORTHO05D008429 9.0e-111 404.4 229 82.5
COL.COLO4_38511 Corchorus olitorius HOM05D006606 ORTHO05D008429 8.5e-101 371.3 445 48.3
Cre19.g750247 Chlamydomonas reinhardtii HOM05D006606 ORTHO05D008429 2.4e-95 353.2 337 53.4
HPP92_024552 Vanilla planifolia HOM05D006606 ORTHO05D008429 1.7e-88 330.5 294 59.9
Lj3A357T51 Lonicera japonica HOM05D006606 ORTHO05D008429 2.2e-88 330.1 182 81.3
Sopen12g033460 Solanum pennellii HOM05D006606 ORTHO05D008429 1.2e-83 314.3 192 78.6
SEGI_35229 Sequoiadendron giganteum HOM05D006606 ORTHO05D008429 3.3e-81 306.2 215 65.6
Manes.01G001200 Manihot esculenta HOM05D006606 ORTHO05D008429 1.1e-79 301.2 250 62.0
Psat5g098600 Pisum sativum HOM05D006606 ORTHO05D008429 5.0e-77 292.4 185 73.5
Hund24463 Selenicereus undatus HOM05D006606 ORTHO05D008429 4.2e-76 289.3 230 63.0
CDE09G0731 Ceratophyllum demersum HOM05D006606 ORTHO05D008429 5.7e-73 278.9 207 64.3
TPR.G26571 Trifolium pratense HOM05D006606 ORTHO05D008429 1.5e-68 264.2 291 50.9
Thhalv10000634m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 8.9e-58 228.4 242 58.3
Thhalv10029367m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 1.0e-21 108.6 63 84.1
VMungo1383G0479 Vigna mungo HOM05D000517 ORTHO05D000751 8.7e-21 105.5 94 54.3
Lj3C376T8 Lonicera japonica HOM05D006606 ORTHO05D008429 4.0e-18 96.7 94 57.4
Lj3C357T11 Lonicera japonica HOM05D006606 ORTHO05D008429 5.8e-17 92.8 145 46.2
PSO017G3682 Papaver somniferum HOM05D006606 ORTHO05D008429 4.9e-08 63.2 36 69.4


User provided reference genes

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