Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G21730 Arabidopsis lyrata HOM05D007934 ORTHO05D010067 2.3e-58 228.8 124 100.0
AT1G10800 Arabidopsis thaliana HOM05D007934 ORTHO05D010067 3.5e-51 204.9 116 95.7
Carub.0001s1035 Capsella rubella HOM05D007934 ORTHO05D010067 1.3e-50 203.0 124 88.7
Thhalv10009458m.g Eutrema salsugineum HOM05D007934 ORTHO05D010067 8.2e-48 193.7 124 84.7
BcaC05g24952 Brassica carinata HOM05D007934 ORTHO05D010067 6.9e-47 190.7 118 84.7
Sp1g09500 Schrenkiella parvula HOM05D007934 ORTHO05D010067 5.9e-46 187.6 118 85.6
CARHR011020 Cardamine hirsuta HOM05D007934 ORTHO05D010067 2.1e-43 179.1 108 88.0
A06p07590 Brassica napus HOM05D007934 ORTHO05D010067 2.5e-41 172.2 109 85.3
BolC5t29659H Brassica oleracea HOM05D007934 ORTHO05D010067 2.5e-41 172.2 108 84.3
BraA06t23961Z Brassica rapa HOM05D007934 ORTHO05D010067 2.5e-41 172.2 109 85.3
C05p09150 Brassica napus HOM05D007934 ORTHO05D010067 3.3e-41 171.8 108 84.3
THA.LOC104809589 Tarenaya hassleriana HOM05D007934 ORTHO05D010067 2.3e-34 149.1 109 73.4
Dinv27156 Davidia involucrata HOM05D007934 ORTHO05D010067 1.2e-27 126.7 107 61.7
Manes.13G117300 Manihot esculenta HOM05D007934 ORTHO05D010067 3.6e-27 125.2 109 62.4
Cfa008702 Carpinus fangiana HOM05D007934 ORTHO05D010067 8.0e-27 124.0 106 56.6
Sabra14G0111200 Salix brachista HOM05D007934 ORTHO05D010067 4.0e-26 121.7 115 59.1
FvH4_4g12460 Fragaria vesca HOM05D007934 ORTHO05D010067 1.1e-25 120.2 118 54.2
FAN12G0351 Fragaria x ananassa HOM05D007934 ORTHO05D010067 1.1e-25 120.2 118 54.2
Thecc.04G187000 Theobroma cacao HOM05D007934 ORTHO05D010067 2.0e-25 119.4 109 54.1
Lj1g0008563 Lotus japonicus HOM05D007934 ORTHO05D010067 2.6e-25 119.0 118 53.4
QL06p027793 Quercus lobata HOM05D007934 ORTHO05D010067 3.3e-25 118.6 106 58.5
CSS0014535 Camellia sinensis var. sinensis HOM05D007934 ORTHO05D010067 4.4e-25 118.2 106 57.5
Duzib268G0160 Durio zibethinus HOM05D007934 ORTHO05D010067 4.4e-25 118.2 118 53.4
COL.COLO4_06792 Corchorus olitorius HOM05D007934 ORTHO05D010067 5.7e-25 117.9 108 54.6
Lalb_Chr10g0092091 Lupinus albus HOM05D007934 ORTHO05D010067 5.7e-25 117.9 108 57.4
TPR.G2903 Trifolium pratense HOM05D000246 ORTHO05D005907 5.7e-25 117.9 104 57.7
CiPaw.02G060500 Carya illinoinensis HOM05D007934 ORTHO05D010067 7.5e-25 117.5 108 54.6
FAN17G0103 Fragaria x ananassa HOM05D007934 ORTHO05D010067 9.7e-25 117.1 106 57.5
Medtr7g021860 Medicago truncatula HOM05D007934 ORTHO05D010067 9.7e-25 117.1 108 58.3
Ciclev10033502m.g Citrus clementina HOM05D007934 ORTHO05D010067 1.3e-24 116.7 104 60.6
Atru.chr2.1662 Acer truncatum HOM05D007934 ORTHO05D010067 1.7e-24 116.3 110 56.4
MBI07_g12253_MAGBIO Magnolia biondii HOM05D007934 ORTHO05D010067 3.7e-24 115.2 106 61.3
Atru.chr2.1676 Acer truncatum HOM05D007934 ORTHO05D010067 8.2e-24 114.0 110 55.5
Nn1g08266 Nelumbo nucifera HOM05D007934 ORTHO05D010067 1.1e-23 113.6 109 56.9
Psat3g187720 Pisum sativum HOM05D007934 ORTHO05D010067 1.4e-23 113.2 106 55.7
Glyma.09G276700 Glycine max HOM05D007934 ORTHO05D010067 3.1e-23 112.1 109 54.1
MD04G1026300 Malus domestica HOM05D007934 ORTHO05D010067 3.1e-23 112.1 107 57.0
RcHm_v2.0_Chr4g0410771 Rosa chinensis HOM05D007934 ORTHO05D010067 4.1e-23 111.7 103 57.3
Aqoxy2G00204 Aquilegia oxysepala HOM05D007934 ORTHO05D010067 7.0e-23 110.9 106 54.7
PGSC0003DMG400006568 Solanum tuberosum HOM05D007934 ORTHO05D010067 7.0e-23 110.9 110 50.0
Solyc09g098115.1 Solanum lycopersicum HOM05D007934 ORTHO05D010067 9.1e-23 110.5 110 50.0
Phvul.008G084200 Phaseolus vulgaris HOM05D007934 ORTHO05D010067 1.2e-22 110.2 120 50.0
CAN.G681.52 Capsicum annuum HOM05D007934 ORTHO05D010067 1.6e-22 109.8 119 48.7
Sopen09g036060 Solanum pennellii HOM05D007934 ORTHO05D010067 1.6e-22 109.8 110 49.1
DCAR_010060 Daucus carota HOM05D007934 ORTHO05D010067 2.7e-22 109.0 107 54.2
Actinidia32959 Actinidia chinensis HOM05D007934 ORTHO05D010067 7.7e-22 107.5 95 56.8
CANSAT78G1949 Cannabis sativa HOM05D007934 ORTHO05D010067 7.7e-22 107.5 109 51.4
Prupe.1G176000 Prunus persica HOM05D007934 ORTHO05D010067 7.7e-22 107.5 108 51.9
Prupe.2G050500 Prunus persica HOM05D007934 ORTHO05D010067 7.7e-22 107.5 108 51.9
Lsat_1_v5_gn_6_58060 Lactuca sativa HOM05D007934 ORTHO05D010067 1.0e-21 107.1 105 55.2
VMungo1383G3460 Vigna mungo HOM05D007934 ORTHO05D010067 1.9e-20 102.8 105 53.3
Ah.04g149820 Amaranthus hybridus HOM05D007934 ORTHO05D010067 4.2e-20 101.7 104 48.1
ClCG08G003680 Citrullus lanatus HOM05D007934 ORTHO05D010067 7.2e-20 100.9 98 54.1
MELO3C026115.2 Cucumis melo HOM05D007934 ORTHO05D010067 6.1e-19 97.8 107 50.5
AUR62026200 Chenopodium quinoa HOM05D007934 ORTHO05D010067 4.0e-18 95.1 105 44.8
HanXRQChr11g0341381 Helianthus annuus HOM05D007934 ORTHO05D010067 6.8e-18 94.4 105 52.4
FAN07G0267 Fragaria x ananassa HOM05D007934 ORTHO05D010067 5.7e-17 91.3 106 50.0
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 4.8e-16 88.2 101 44.6
PGR142G0659 Punica granatum HOM05D007934 ORTHO05D010067 1.1e-15 87.0 84 51.2
Gohir.D05G327600 Gossypium hirsutum HOM05D007934 ORTHO05D010067 2.4e-15 85.9 130 40.8
Eucgr.H00465 Eucalyptus grandis HOM05D007934 ORTHO05D010067 4.1e-15 85.1 68 66.2
Gorai.009G351500 Gossypium raimondii HOM05D007934 ORTHO05D010067 5.4e-15 84.7 130 40.0
Gohir.A05G327400 Gossypium hirsutum HOM05D007934 ORTHO05D010067 3.5e-14 82.0 112 44.6
SEGI_13791 Sequoiadendron giganteum HOM05D007934 ORTHO05D010067 1.1e-12 77.0 104 39.4
TAR636G3543 Trochodendron aralioides HOM05D007934 ORTHO05D010067 1.1e-12 77.0 64 64.1
Potri.014G147600 Populus trichocarpa HOM05D007934 ORTHO05D010067 1.2e-11 73.6 63 61.9
AagrBONN_evm.TU.Sc2ySwM_368.2439 Anthoceros agrestis HOM05D007934 ORTHO05D010067 2.7e-11 72.4 115 36.5
AUR62018491 Chenopodium quinoa HOM05D007934 ORTHO05D010879 1.0e-10 70.5 68 50.0
PSO170G0593 Papaver somniferum HOM05D007934 ORTHO05D010067 8.8e-10 67.4 62 59.7
Mapoly0034s0074 Marchantia polymorpha HOM05D007934 ORTHO05D010067 2.0e-09 66.2 105 36.2
Cfa002814 Carpinus fangiana HOM05D007934 ORTHO05D010067 2.4e-07 59.3 52 53.8
Pp3c2_28920 Physcomitrium patens HOM05D007934 ORTHO05D010067 1.2e-06 57.0 79 39.2
Pp3c2_28960 Physcomitrium patens HOM05D007934 ORTHO05D010067 1.2e-06 57.0 79 39.2
Pp3c7_26640 Physcomitrium patens HOM05D007934 ORTHO05D010067 1.2e-06 57.0 105 35.2


User provided reference genes

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