Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G21190 Arabidopsis lyrata HOM05D007593 ORTHO05D009686 4.4e-212 741.1 400 100.0
Carub.0001s0986 Capsella rubella HOM05D007593 ORTHO05D009686 7.7e-164 580.9 380 83.7
BcaC05g24886 Brassica carinata HOM05D007593 ORTHO05D009686 3.3e-159 565.5 429 73.7
BolC5t29606H Brassica oleracea HOM05D007593 ORTHO05D009686 8.2e-158 560.8 445 71.7
A06p07060 Brassica napus HOM05D007593 ORTHO05D009686 2.4e-157 559.3 436 72.7
C05p08550 Brassica napus HOM05D007593 ORTHO05D009686 8.8e-152 540.8 470 67.2
CARHR010560 Cardamine hirsuta HOM05D007593 ORTHO05D009686 5.5e-146 521.5 412 72.1
Thhalv10007877m.g Eutrema salsugineum HOM05D007593 ORTHO05D009686 2.1e-137 493.0 403 71.7
BraA06t23921Z Brassica rapa HOM05D007593 ORTHO05D009686 6.1e-137 491.5 437 65.7
BcaC05g24925 Brassica carinata HOM05D007593 ORTHO05D009686 1.1e-133 480.7 421 66.5
AT1G10417 Arabidopsis thaliana HOM05D007593 ORTHO05D009686 2.3e-128 463.0 309 85.8
BcaC05g24887 Brassica carinata HOM05D007593 ORTHO05D009686 3.2e-85 319.7 317 60.3
Thecc.02G236500 Theobroma cacao HOM05D007593 ORTHO05D009686 1.1e-80 304.7 327 56.0
Manes.01G193300 Manihot esculenta HOM05D007593 ORTHO05D009686 2.0e-79 300.4 406 48.8
Atru.chr11.1889 Acer truncatum HOM05D007593 ORTHO05D009686 5.8e-79 298.9 352 51.7
Prupe.1G263900 Prunus persica HOM05D007593 ORTHO05D009686 1.1e-77 294.7 294 57.8
Duzib268G1169 Durio zibethinus HOM05D007593 ORTHO05D009686 9.3e-77 291.6 410 47.8
QL03p066681 Quercus lobata HOM05D007593 ORTHO05D009686 1.2e-76 291.2 454 44.9
Potri.008G190600 Populus trichocarpa HOM05D007593 ORTHO05D009686 4.6e-76 289.3 409 48.2
Glyma.02G025300 Glycine max HOM05D007593 ORTHO05D009686 6.7e-75 285.4 291 55.7
Aqoxy3G00839 Aquilegia oxysepala HOM05D007593 ORTHO05D009686 8.7e-75 285.0 308 54.5
PGR102G2137 Punica granatum HOM05D007593 ORTHO05D009686 1.9e-74 283.9 407 45.2
Phvul.002G079500 Phaseolus vulgaris HOM05D007593 ORTHO05D009686 9.6e-74 281.6 287 57.1
MD13G1083000 Malus domestica HOM05D007593 ORTHO05D009686 4.8e-73 279.3 325 54.8
Nn3g17072 Nelumbo nucifera HOM05D007593 ORTHO05D009686 1.3e-70 271.2 328 48.5
TWI75G0370 Tripterygium wilfordii HOM05D007593 ORTHO05D009686 4.9e-70 269.2 280 55.4
PSO161G0019 Papaver somniferum HOM05D007593 ORTHO05D009686 1.2e-68 264.6 360 45.6
Glyma.01G039400 Glycine max HOM05D007593 ORTHO05D009686 6.7e-67 258.8 291 52.2
AUR62026494 Chenopodium quinoa HOM05D007593 ORTHO05D009686 3.3e-66 256.5 287 53.0
FvH4_4g35470 Fragaria vesca HOM05D007593 ORTHO05D009686 1.3e-65 254.6 304 50.3
FAN07G2090 Fragaria x ananassa HOM05D007593 ORTHO05D009686 4.1e-64 249.6 294 51.0
AUR62026300 Chenopodium quinoa HOM05D007593 ORTHO05D009686 6.9e-64 248.8 352 46.0
CiPaw.06G078500 Carya illinoinensis HOM05D007593 ORTHO05D009686 2.6e-63 246.9 349 47.6
Cpa.g.sc5.302 Carica papaya HOM05D007593 ORTHO05D009686 7.6e-63 245.4 250 56.8
FAN12G3835 Fragaria x ananassa HOM05D007593 ORTHO05D009686 1.4e-61 241.1 231 59.7
Gohir.A05G320500 Gossypium hirsutum HOM05D007593 ORTHO05D009686 1.3e-59 234.6 280 52.9
FAN17G2874 Fragaria x ananassa HOM05D007593 ORTHO05D009686 3.0e-59 233.4 294 48.3
Psat2g115200 Pisum sativum HOM05D007593 ORTHO05D009686 1.6e-57 227.6 278 50.0
FAN22G1720 Fragaria x ananassa HOM05D007593 ORTHO05D009686 3.7e-57 226.5 302 46.7
Sabra08G0144600 Salix brachista HOM05D007593 ORTHO05D009686 6.3e-57 225.7 426 40.6
Nitab4.5_0002542g0050 Nicotiana tabacum HOM05D007593 ORTHO05D009686 3.1e-56 223.4 401 40.9
Sabra11G0071900 Salix brachista HOM05D007593 ORTHO05D009686 3.1e-56 223.4 303 48.2
FAN12G2740 Fragaria x ananassa HOM05D007593 ORTHO05D009686 5.3e-56 222.6 303 46.9
Sabra11G0071700 Salix brachista HOM05D007593 ORTHO05D009686 5.3e-56 222.6 303 47.9
VMungo1215G1938 Vigna mungo HOM05D007593 ORTHO05D009686 5.3e-56 222.6 274 51.1
Gorai.009G346400 Gossypium raimondii HOM05D007593 ORTHO05D009686 2.0e-55 220.7 434 39.6
Sc04g0008660 Simmondsia chinensis HOM05D007593 ORTHO05D009686 1.7e-54 217.6 238 52.5
Gohir.D05G322700 Gossypium hirsutum HOM05D007593 ORTHO05D009686 2.2e-54 217.2 413 40.4
Medtr5g037260 Medicago truncatula HOM05D007593 ORTHO05D009686 6.1e-52 209.1 309 44.7
RcHm_v2.0_Chr4g0445111 Rosa chinensis HOM05D007593 ORTHO05D009686 1.5e-50 204.5 235 52.3
CANSAT07G0001 Cannabis sativa HOM05D007593 ORTHO05D009686 2.2e-49 200.7 356 39.3
Lj2g0003805 Lotus japonicus HOM05D007593 ORTHO05D009686 8.2e-49 198.7 293 45.4
arahy.Tifrunner.gnm1.ann1.M4LE0B Arachis hypogaea HOM05D007593 ORTHO05D009686 1.4e-48 198.0 313 43.5
EL10Ac6g13115 Beta vulgaris HOM05D007593 ORTHO05D009686 5.3e-48 196.1 305 43.0
COL.COLO4_36239 Corchorus olitorius HOM05D007593 ORTHO05D009686 1.5e-47 194.5 287 44.3
Hma1.2p1_0289F.1_g114430 Hydrangea macrophylla HOM05D007593 ORTHO05D009686 2.0e-47 194.1 404 35.9
Lsat_1_v5_gn_8_160680 Lactuca sativa HOM05D007593 ORTHO05D009686 1.3e-46 191.4 253 47.4
GSVIVG01020118001 Vitis vinifera HOM05D007593 ORTHO05D009686 1.3e-46 191.4 167 63.5
ECA233G4970 Erigeron canadensis HOM05D007593 ORTHO05D009686 2.2e-46 190.7 312 41.0
Ciclev10032856m.g Citrus clementina HOM05D007593 ORTHO05D009686 1.0e-43 181.8 167 60.5
Haze_12082 Corylus avellana HOM05D007593 ORTHO05D009686 1.8e-43 181.0 406 36.2
Nitab4.5_0000791g0030 Nicotiana tabacum HOM05D007593 ORTHO05D009686 1.8e-43 181.0 409 35.9
Ca_04684_v3 Cicer arietinum L. HOM05D007593 ORTHO05D009686 4.5e-39 166.4 167 58.1
Actinidia01171 Actinidia chinensis HOM05D007593 ORTHO05D009686 1.3e-38 164.9 260 45.4
HanXRQChr12g0371131 Helianthus annuus HOM05D007593 ORTHO05D009686 5.0e-38 162.9 190 51.1
TAR629G1096 Trochodendron aralioides HOM05D007593 ORTHO05D009686 7.2e-37 159.1 154 59.7
Rhsim12G0127800 Rhododendron simsii HOM05D007593 ORTHO05D009686 3.3e-34 150.2 271 38.7
Cc11_g13810 Coffea canephora HOM05D007593 ORTHO05D009686 5.7e-34 149.4 168 48.8
Eucgr.B03393 Eucalyptus grandis HOM05D007593 ORTHO05D009686 3.8e-30 136.7 135 54.8
Sp1g09040 Schrenkiella parvula HOM05D007593 ORTHO05D009686 1.2e-28 131.7 233 44.6
Zm00001eb223170 Zea mays HOM05D007593 ORTHO05D009686 1.0e-27 128.6 188 39.9
CAN.G27.56 Capsicum annuum HOM05D007593 ORTHO05D009686 4.4e-26 123.2 263 33.5
Hund25291 Selenicereus undatus HOM05D007593 ORTHO05D009686 2.2e-25 120.9 109 62.4
vmacro16309 Vaccinium macrocarpon HOM05D007593 ORTHO05D009686 1.1e-24 118.6 277 33.6
DCAR_031078 Daucus carota HOM05D007593 ORTHO05D009686 1.9e-21 107.8 173 36.4
Lalb_Chr05g0217431 Lupinus albus HOM05D007593 ORTHO05D009686 2.8e-20 104.0 111 58.6
Lalb_Chr05g0217441 Lupinus albus HOM05D007593 ORTHO05D009686 4.4e-18 96.7 125 44.8
TPR.G26746 Trifolium pratense HOM05D007593 ORTHO05D009686 1.1e-16 92.0 313 30.7
CDE07G1947 Ceratophyllum demersum HOM05D007593 ORTHO05D009686 1.5e-13 81.6 147 38.8
Sabra15G0067100 Salix brachista HOM05D007593 ORTHO05D009686 1.0e-11 75.5 73 60.3
SMO174G0259 Selaginella moellendorffii HOM05D003005 ORTHO05D021244 1.5e-10 71.6 295 21.4
AagrBONN_evm.TU.Sc2ySwM_228.4242 Anthoceros agrestis HOM05D007593 ORTHO05D009686 2.2e-09 67.8 185 23.8
arahy.Tifrunner.gnm1.ann1.YHM9KM Arachis hypogaea HOM05D007593 ORTHO05D009686 1.4e-08 65.1 59 66.1
CSS0023539 Camellia sinensis var. sinensis HOM05D007593 ORTHO05D009686 2.0e-07 61.2 114 42.1
Peaxi162Scf00209g00948 Petunia axillaris HOM05D007593 ORTHO05D009686 2.7e-07 60.8 85 44.7
RcHm_v2.0_Chr4g0445121 Rosa chinensis HOM05D007593 ORTHO05D009686 4.6e-07 60.1 62 46.8
Ciclev10033560m.g Citrus clementina HOM05D007593 ORTHO05D009686 6.6e-06 56.2 96 41.7


User provided reference genes

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