Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G17850 Arabidopsis lyrata HOM05D006284 ORTHO05D007793 1.1e-74 283.1 138 100.0
AT1G07645 Arabidopsis thaliana HOM05D006284 ORTHO05D007793 6.3e-73 277.3 138 97.8
Carub.0001s0699 Capsella rubella HOM05D006284 ORTHO05D007793 2.4e-72 275.4 138 96.4
BcaC07g42493 Brassica carinata HOM05D006284 ORTHO05D007793 3.1e-72 275.0 138 96.4
Thhalv10009069m.g Eutrema salsugineum HOM05D006284 ORTHO05D007793 4.1e-72 274.6 138 95.7
BcaC07g41981 Brassica carinata HOM05D006284 ORTHO05D007793 5.9e-71 270.8 138 94.9
BcaC07g42491 Brassica carinata HOM05D006284 ORTHO05D007793 5.9e-71 270.8 138 94.9
C08p50410 Brassica napus HOM05D006284 ORTHO05D007793 5.9e-71 270.8 138 94.9
BolC8t52569H Brassica oleracea HOM05D006284 ORTHO05D007793 5.9e-71 270.8 138 94.9
A09p66230 Brassica napus HOM05D006284 ORTHO05D007793 1.7e-70 269.2 138 94.9
BraA09t41961Z Brassica rapa HOM05D006284 ORTHO05D007793 6.5e-70 267.3 138 94.2
Sp1g06380 Schrenkiella parvula HOM05D006284 ORTHO05D007793 8.5e-70 266.9 138 93.5
BcaC07g42490 Brassica carinata HOM05D006284 ORTHO05D007793 2.1e-68 262.3 139 93.5
CARHR007450 Cardamine hirsuta HOM05D006284 ORTHO05D007793 3.6e-68 261.5 138 90.6
A06p04820 Brassica napus HOM05D006284 ORTHO05D007793 3.9e-67 258.1 139 89.9
Aa31sc281G30 Aethionema arabicum HOM05D006284 ORTHO05D007793 5.1e-67 257.7 135 91.9
BraA06t23686Z Brassica rapa HOM05D006284 ORTHO05D007793 5.1e-67 257.7 138 89.9
C05p05670 Brassica napus HOM05D006284 ORTHO05D007793 6.7e-67 257.3 139 89.9
BolC5t29337H Brassica oleracea HOM05D006284 ORTHO05D007793 8.8e-67 256.9 138 89.9
Atru.chr3.3846 Acer truncatum HOM05D006284 ORTHO05D007793 2.5e-61 238.8 136 84.6
Hma1.2p1_1897F.1_g306861 Hydrangea macrophylla HOM05D006284 ORTHO05D007793 3.2e-61 238.4 134 83.6
QL01p032751 Quercus lobata HOM05D006284 ORTHO05D007793 7.2e-61 237.3 136 85.3
CiPaw.13G097000 Carya illinoinensis HOM05D006284 ORTHO05D007793 6.1e-60 234.2 136 82.4
Dinv03613 Davidia involucrata HOM05D006284 ORTHO05D007793 1.4e-59 233.0 134 82.1
Cpa.g.sc190.6 Carica papaya HOM05D006284 ORTHO05D007793 3.9e-59 231.5 133 82.7
Haze_24061 Corylus avellana HOM05D006284 ORTHO05D007793 1.5e-58 229.6 134 81.3
Psat7g217680 Pisum sativum HOM05D006284 ORTHO05D007793 3.3e-58 228.4 137 77.4
Medtr4g063500 Medicago truncatula HOM05D006284 ORTHO05D007793 9.7e-58 226.9 135 78.5
arahy.Tifrunner.gnm1.ann1.W3SBYC Arachis hypogaea HOM05D006284 ORTHO05D007793 2.2e-57 225.7 137 80.3
TAR623G0100 Trochodendron aralioides HOM05D006284 ORTHO05D007793 2.2e-57 225.7 136 80.1
FAN11G1150 Fragaria x ananassa HOM05D006284 ORTHO05D007793 2.8e-57 225.3 134 79.9
FAN21G0749 Fragaria x ananassa HOM05D006284 ORTHO05D007793 2.8e-57 225.3 134 79.9
PSO339G4936 Papaver somniferum HOM05D006284 ORTHO05D007793 4.8e-57 224.6 135 80.0
Rhsim01G0226200 Rhododendron simsii HOM05D006284 ORTHO05D007793 4.8e-57 224.6 134 79.1
FAN16G2200 Fragaria x ananassa HOM05D006284 ORTHO05D007793 6.3e-57 224.2 134 79.1
Prupe.6G080800 Prunus persica HOM05D006284 ORTHO05D007793 6.3e-57 224.2 131 79.4
HanXRQChr15g0493271 Helianthus annuus HOM05D006284 ORTHO05D007793 1.1e-56 223.4 137 78.8
vmacro14530 Vaccinium macrocarpon HOM05D006284 ORTHO05D007793 1.1e-56 223.4 134 78.4
arahy.Tifrunner.gnm1.ann1.6H51DS Arachis hypogaea HOM05D006284 ORTHO05D007793 1.8e-56 222.6 137 79.6
Ca_19180_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 1.8e-56 222.6 137 75.2
Ca_31183_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 1.8e-56 222.6 137 75.2
RcHm_v2.0_Chr5g0063801 Rosa chinensis HOM05D006284 ORTHO05D007793 3.1e-56 221.9 136 79.4
ECA247G3393 Erigeron canadensis HOM05D006284 ORTHO05D007793 4.1e-56 221.5 135 77.8
Lj3g0026697 Lotus japonicus HOM05D006284 ORTHO05D007793 4.1e-56 221.5 138 78.3
THA.LOC104800652 Tarenaya hassleriana HOM05D006284 ORTHO05D007793 7.0e-56 220.7 136 77.9
Lalb_Chr01g0003741 Lupinus albus HOM05D006284 ORTHO05D007793 1.2e-55 219.9 136 79.4
MSTRG.15272 Avicennia marina HOM05D006284 ORTHO05D007793 2.0e-55 219.2 138 77.5
PSO384G0339 Papaver somniferum HOM05D006284 ORTHO05D007793 2.0e-55 219.2 135 78.5
Sc06g0008270 Simmondsia chinensis HOM05D006284 ORTHO05D007793 2.0e-55 219.2 131 77.9
Aqoxy4G02964 Aquilegia oxysepala HOM05D006284 ORTHO05D007793 2.6e-55 218.8 131 77.1
MD11G1144900 Malus domestica HOM05D006284 ORTHO05D007793 2.6e-55 218.8 134 76.9
COL.COLO4_18479 Corchorus olitorius HOM05D006284 ORTHO05D007793 3.5e-55 218.4 137 76.6
EL10Ac7g15985 Beta vulgaris HOM05D006284 ORTHO05D007793 4.5e-55 218.0 136 77.2
Lsat_1_v5_gn_5_183840 Lactuca sativa HOM05D006284 ORTHO05D007793 4.5e-55 218.0 135 77.0
Sed0023805 Sechium edule HOM05D006284 ORTHO05D007793 4.5e-55 218.0 136 77.2
Manes.11G132300 Manihot esculenta HOM05D006284 ORTHO05D007793 7.7e-55 217.2 136 73.5
DCAR_015613 Daucus carota HOM05D006284 ORTHO05D007793 1.0e-54 216.9 136 75.7
Migut.L00518 Erythranthe guttata HOM05D006284 ORTHO05D007793 1.0e-54 216.9 137 77.4
GSVIVG01025000001 Vitis vinifera HOM05D006284 ORTHO05D007793 1.0e-54 216.9 136 77.2
Thecc.09G324900 Theobroma cacao HOM05D006284 ORTHO05D007793 1.3e-54 216.5 137 75.9
ClCG02G020310 Citrullus lanatus HOM05D006284 ORTHO05D007793 1.7e-54 216.1 136 76.5
Nitab4.5_0001304g0050 Nicotiana tabacum HOM05D006284 ORTHO05D007793 2.9e-54 215.3 136 73.5
Sabra16G0143200 Salix brachista HOM05D006284 ORTHO05D007793 2.9e-54 215.3 136 75.7
Lsat_1_v5_gn_9_22581 Lactuca sativa HOM05D006284 ORTHO05D007793 3.8e-54 214.9 135 76.3
SalBow5G5166 Salvia bowleyana HOM05D006284 ORTHO05D007793 3.8e-54 214.9 137 75.9
Solyc06g075990.4 Solanum lycopersicum HOM05D006284 ORTHO05D007793 3.8e-54 214.9 135 73.3
VMungo1127G1430 Vigna mungo HOM05D006284 ORTHO05D007793 3.8e-54 214.9 137 75.2
Duzib168G1259 Durio zibethinus HOM05D006284 ORTHO05D007793 5.0e-54 214.5 137 75.2
Actinidia33860 Actinidia chinensis HOM05D006284 ORTHO05D007793 6.5e-54 214.2 136 75.0
CANSAT54G2008 Cannabis sativa HOM05D006284 ORTHO05D007793 6.5e-54 214.2 138 74.6
Potri.001G237500 Populus trichocarpa HOM05D006284 ORTHO05D007793 8.5e-54 213.8 136 74.3
Sopen06g032410 Solanum pennellii HOM05D006284 ORTHO05D007793 8.5e-54 213.8 137 73.7
Oeu041449.2 Olea europaea HOM05D006284 ORTHO05D007793 1.1e-53 213.4 136 75.0
PGSC0003DMG400030315 Solanum tuberosum HOM05D006284 ORTHO05D007793 1.1e-53 213.4 137 74.5
Eucgr.B02382 Eucalyptus grandis HOM05D006284 ORTHO05D007793 1.9e-53 212.6 132 75.8
Nitab4.5_0001838g0030 Nicotiana tabacum HOM05D006284 ORTHO05D007793 1.9e-53 212.6 136 72.8
Phvul.011G065500 Phaseolus vulgaris HOM05D006284 ORTHO05D007793 1.9e-53 212.6 137 75.2
CAN.G394.47 Capsicum annuum HOM05D006284 ORTHO05D007793 5.5e-53 211.1 136 73.5
AUR62001816 Chenopodium quinoa HOM05D006284 ORTHO05D007793 5.5e-53 211.1 131 76.3
AUR62009602 Chenopodium quinoa HOM05D006284 ORTHO05D007793 5.5e-53 211.1 134 73.9
Gorai.009G100800 Gossypium raimondii HOM05D006284 ORTHO05D007793 5.5e-53 211.1 138 73.2
Gohir.A05G097100 Gossypium hirsutum HOM05D006284 ORTHO05D007793 1.2e-52 209.9 138 72.5
MELO3C013690.2 Cucumis melo HOM05D006284 ORTHO05D007793 1.6e-52 209.5 136 74.3
Glyma.12G064500 Glycine max HOM05D006284 ORTHO05D007793 1.6e-52 209.5 136 75.0
Oeu056746.1 Olea europaea HOM05D006284 ORTHO05D007793 1.6e-52 209.5 136 72.8
Os03g0277500 Oryza sativa ssp. japonica HOM05D006284 ORTHO05D007793 4.7e-52 208.0 130 75.4
Peaxi162Scf00679g00212 Petunia axillaris HOM05D006284 ORTHO05D007793 4.7e-52 208.0 136 73.5
PGR102G0171 Punica granatum HOM05D006284 ORTHO05D007793 2.3e-51 205.7 137 72.3
Gohir.D05G097250 Gossypium hirsutum HOM05D006284 ORTHO05D007793 5.2e-51 204.5 132 72.0
CsaV3_6G017010 Cucumis sativus L. HOM05D006284 ORTHO05D007793 3.3e-50 201.8 136 70.6
Migut.L00567 Erythranthe guttata HOM05D006284 ORTHO05D007793 2.8e-49 198.7 129 76.0
TWI79G0071 Tripterygium wilfordii HOM05D006284 ORTHO05D007793 7.0e-48 194.1 137 73.0
SGA_v2.0_scaffold606G53170 Striga asiatica HOM05D006284 ORTHO05D007793 4.5e-47 191.4 131 71.8
SHI00991 Sapria himalayana HOM05D006284 ORTHO05D007793 1.1e-45 186.8 130 69.2
Zm00001eb012550 Zea mays HOM05D006284 ORTHO05D007793 1.8e-43 179.5 138 62.3
Ciclev10029580m.g Citrus clementina HOM05D006284 ORTHO05D007793 1.5e-42 176.4 116 75.0
Gohir.A07G096400 Gossypium hirsutum HOM05D006284 ORTHO05D007793 4.8e-41 171.4 152 59.2
Mapoly0004s0146 Marchantia polymorpha HOM05D006284 ORTHO05D007793 4.8e-41 171.4 128 64.8
MBI14_g11686_MAGBIO Magnolia biondii HOM05D006284 ORTHO05D007793 2.2e-38 162.5 93 80.6
SMO165G0091 Selaginella moellendorffii HOM05D006284 ORTHO05D007793 5.0e-38 161.4 129 56.6
Gorai.001G108700 Gossypium raimondii HOM05D006284 ORTHO05D007793 1.9e-37 159.5 132 63.6
Gohir.D07G100800 Gossypium hirsutum HOM05D006284 ORTHO05D007793 5.5e-37 157.9 158 56.3
TPR.G10205 Trifolium pratense HOM05D006284 ORTHO05D007793 5.5e-37 157.9 101 72.3
Lj2A1058T40 Lonicera japonica HOM05D006284 ORTHO05D007793 2.1e-36 156.0 95 75.8
FvH4_3g35580 Fragaria vesca HOM05D006284 ORTHO05D007793 2.3e-35 152.5 134 61.2
DCAR_018897 Daucus carota HOM05D006284 ORTHO05D007793 8.8e-35 150.6 94 73.4
Oeu033642.1 Olea europaea HOM05D006284 ORTHO05D007793 5.7e-34 147.9 101 69.3
Oeu056743.1 Olea europaea HOM05D006284 ORTHO05D007793 1.4e-32 143.3 97 69.1
CSS0000036 Camellia sinensis var. sinensis HOM05D006284 ORTHO05D007793 9.1e-32 140.6 134 55.2
Oeu056758.1 Olea europaea HOM05D006284 ORTHO05D007793 1.6e-31 139.8 97 69.1
FAN11G3292 Fragaria x ananassa HOM05D006284 ORTHO05D007793 1.1e-29 133.7 134 56.0
Oeu056739.1 Olea europaea HOM05D006284 ORTHO05D007793 1.6e-28 129.8 136 52.9
AagrBONN_evm.TU.Sc2ySwM_117.384 Anthoceros agrestis HOM05D006284 ORTHO05D007793 1.5e-21 106.7 129 45.0
AagrBONN_evm.TU.Sc2ySwM_344.4820 Anthoceros agrestis HOM05D006284 ORTHO05D007793 1.5e-21 106.7 95 54.7
SEGI_15500 Sequoiadendron giganteum HOM05D006284 ORTHO05D007793 3.3e-21 105.5 95 56.8
Peaxi162Scf00406g00314 Petunia axillaris HOM05D006284 ORTHO05D007793 1.6e-20 103.2 136 44.9
AagrBONN_evm.TU.Sc2ySwM_344.4822 Anthoceros agrestis HOM05D018382 ORTHO05D001873 3.1e-19 99.0 117 43.6
MD07G1053700 Malus domestica HOM05D006284 ORTHO05D007793 1.7e-17 93.2 61 68.9
CANSAT21G1079 Cannabis sativa HOM05D002411 ORTHO05D002564 2.2e-17 92.8 60 71.7
Pp3c19_1590 Physcomitrium patens HOM05D006284 ORTHO05D007793 6.4e-17 91.3 126 39.7
MD14G1025700 Malus domestica HOM05D006284 ORTHO05D007793 1.4e-16 90.1 54 74.1
FvH4_3g35610 Fragaria vesca HOM05D006284 ORTHO05D007793 2.4e-16 89.4 134 41.0
Cc01_g12610 Coffea canephora HOM05D006284 ORTHO05D007793 1.6e-15 86.7 49 81.6
TPR.G10968 Trifolium pratense HOM05D006284 ORTHO05D007793 3.3e-13 79.0 40 90.0
Ah.08g219180 Amaranthus hybridus HOM05D006284 ORTHO05D007793 1.7e-09 66.6 41 75.6
ATR0559G308 Amborella trichopoda HOM05D006284 ORTHO05D007793 4.9e-09 65.1 37 78.4
Cc01_g12620 Coffea canephora HOM05D006284 ORTHO05D007793 1.7e-06 56.6 30 83.3


User provided reference genes

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