Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G17300 Arabidopsis lyrata HOM05D009317 ORTHO05D011493 6.2e-32 140.2 72 100.0
AT1G07175 Arabidopsis thaliana HOM05D009317 ORTHO05D011493 3.1e-23 111.3 72 84.7
Carub.0001s0647 Capsella rubella HOM05D009317 ORTHO05D011493 1.9e-20 102.1 73 76.7
Thhalv10009260m.g Eutrema salsugineum HOM05D009317 ORTHO05D011493 2.5e-20 101.7 74 79.7
Thhalv10009263m.g Eutrema salsugineum HOM05D009317 ORTHO05D011493 2.5e-20 101.7 74 79.7
C08p02940 Brassica napus HOM05D009317 ORTHO05D011493 5.5e-20 100.5 74 75.7
BolC8t47093H Brassica oleracea HOM05D009317 ORTHO05D011493 5.5e-20 100.5 74 75.7
A08p35730 Brassica napus HOM05D009317 ORTHO05D011493 4.6e-19 97.4 74 73.0
BraA08t35480Z Brassica rapa HOM05D009317 ORTHO05D011493 4.6e-19 97.4 74 73.0
BolC5t29297H Brassica oleracea HOM05D009317 ORTHO05D011493 6.1e-19 97.1 73 76.7
CARHR006890 Cardamine hirsuta HOM05D009317 ORTHO05D011493 1.0e-18 96.3 74 75.7
A10p05740 Brassica napus HOM05D009317 ORTHO05D011493 1.3e-18 95.9 73 75.3
BraA10t42835Z Brassica rapa HOM05D009317 ORTHO05D011493 1.3e-18 95.9 73 75.3
C05p05260 Brassica napus HOM05D009317 ORTHO05D011493 9.7e-17 89.7 74 71.6
THA.LOC104800743 Tarenaya hassleriana HOM05D009317 ORTHO05D011493 1.3e-16 89.4 72 69.4
THA.LOC109116766 Tarenaya hassleriana HOM05D009317 ORTHO05D011493 4.8e-16 87.4 68 72.1
AT2G29995 Arabidopsis thaliana HOM05D009317 ORTHO05D011493 2.3e-10 68.6 64 62.5
Thhalv10017505m.g Eutrema salsugineum HOM05D009317 ORTHO05D011493 1.1e-09 66.2 63 63.5
Potri.001G277600 Populus trichocarpa HOM05D009283 ORTHO05D011386 1.1e-09 66.2 72 51.4
Carub.0004s1108 Capsella rubella HOM05D009317 ORTHO05D011493 1.5e-09 65.9 65 63.1
Potri.009G072201 Populus trichocarpa HOM05D009283 ORTHO05D011386 2.5e-09 65.1 68 54.4
C04p58840 Brassica napus HOM05D009317 ORTHO05D011493 9.7e-09 63.2 63 63.5
BolC4t27402H Brassica oleracea HOM05D009317 ORTHO05D011493 9.7e-09 63.2 63 63.5
Sp4g12560 Schrenkiella parvula HOM05D009317 ORTHO05D011493 1.7e-08 62.4 62 61.3
AL4G24750 Arabidopsis lyrata HOM05D009317 ORTHO05D011493 4.8e-08 60.8 61 59.0
A04p22680 Brassica napus HOM05D009317 ORTHO05D011493 4.8e-08 60.8 63 61.9
A05p15440 Brassica napus HOM05D009317 ORTHO05D011493 4.8e-08 60.8 63 57.1
BraA04t17811Z Brassica rapa HOM05D009317 ORTHO05D011493 4.8e-08 60.8 63 61.9
BraA05t20461Z Brassica rapa HOM05D009317 ORTHO05D011493 4.8e-08 60.8 63 57.1
Sabra16G0171600 Salix brachista HOM05D009283 ORTHO05D011386 8.2e-08 60.1 69 53.6
C04p20720 Brassica napus HOM05D009317 ORTHO05D011493 2.4e-07 58.5 68 55.9
BolC4t23600H Brassica oleracea HOM05D009317 ORTHO05D011493 2.4e-07 58.5 68 55.9
CARHR123240 Cardamine hirsuta HOM05D009317 ORTHO05D011493 3.1e-07 58.2 70 55.7
Gohir.D09G089500 Gossypium hirsutum HOM05D009283 ORTHO05D011386 4.1e-07 57.8 72 45.8
Gorai.006G105700 Gossypium raimondii HOM05D009283 ORTHO05D011386 4.1e-07 57.8 72 45.8
Manes.01G160300 Manihot esculenta HOM05D009283 ORTHO05D011386 5.3e-07 57.4 63 49.2
MD11G1071800 Malus domestica HOM05D009283 ORTHO05D011386 6.9e-07 57.0 75 48.0
Gohir.A09G089400 Gossypium hirsutum HOM05D009283 ORTHO05D011386 1.5e-06 55.8 72 44.4
CSS0042268 Camellia sinensis var. sinensis HOM05D009283 ORTHO05D011386 2.0e-06 55.5 65 47.7
Prupe.6G055500 Prunus persica HOM05D009283 ORTHO05D011386 4.5e-06 54.3 71 42.3
Duzib168G1848 Durio zibethinus HOM05D009283 ORTHO05D011386 5.9e-06 53.9 72 48.6


User provided reference genes

Program Settings