Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G16160 Arabidopsis lyrata HOM05D000589 ORTHO05D001885 8.9e-81 303.5 150 100.0
CARHR284490 Cardamine hirsuta HOM05D000589 ORTHO05D001885 9.6e-43 177.2 150 62.7
CARHR059960 Cardamine hirsuta HOM05D000589 ORTHO05D001885 4.6e-37 158.3 135 60.7
Carub.0011s0002 Capsella rubella HOM05D000589 ORTHO05D001885 2.0e-32 142.9 154 53.2
AL2G19110 Arabidopsis lyrata HOM05D000589 ORTHO05D001885 6.5e-15 84.7 178 34.3
C03p56230 Brassica napus HOM05D001498 ORTHO05D001885 3.3e-11 72.4 101 38.6
Carub.0004s0663 Capsella rubella HOM05D000589 ORTHO05D001885 5.7e-11 71.6 92 42.4
BolC9t54652H Brassica oleracea HOM05D000589 ORTHO05D001885 2.2e-10 69.7 101 36.6
BraA03t14502Z Brassica rapa HOM05D000589 ORTHO05D001885 2.2e-10 69.7 142 33.1
BraA08t32950Z Brassica rapa HOM05D000589 ORTHO05D001885 2.8e-10 69.3 109 33.0
Carub.0003s0398 Capsella rubella HOM05D000589 ORTHO05D001885 2.8e-10 69.3 81 40.7
C02p53500 Brassica napus HOM05D001498 ORTHO05D001885 3.7e-10 68.9 101 36.6
C03p66000 Brassica napus HOM05D001498 ORTHO05D001885 3.7e-10 68.9 101 36.6
C04p36710 Brassica napus HOM05D001498 ORTHO05D001885 3.7e-10 68.9 101 36.6
C08p17880 Brassica napus HOM05D001498 ORTHO05D001885 3.7e-10 68.9 101 36.6
BolC9t57315H Brassica oleracea HOM05D000589 ORTHO05D001885 3.7e-10 68.9 101 36.6
Carub.0001s4113 Capsella rubella HOM05D000589 ORTHO05D001885 3.7e-10 68.9 81 40.7
BolC6t38706H Brassica oleracea HOM05D000589 ORTHO05D001885 4.8e-10 68.6 95 37.9
Carub.0008s2840 Capsella rubella HOM05D000589 ORTHO05D001885 4.8e-10 68.6 131 35.1
BolC4t25125H Brassica oleracea HOM05D000589 ORTHO05D001885 8.2e-10 67.8 142 33.8
BolC4t26960H Brassica oleracea HOM05D000589 ORTHO05D001885 8.2e-10 67.8 124 34.7
C01p30550 Brassica napus HOM05D000589 ORTHO05D001885 1.1e-09 67.4 95 36.8
C09p17600 Brassica napus HOM05D001498 ORTHO05D011506 1.1e-09 67.4 101 36.6
BraA01t03046Z Brassica rapa HOM05D000589 ORTHO05D001885 1.8e-09 66.6 138 30.4
BraA07t28350Z Brassica rapa HOM05D000589 ORTHO05D001885 1.8e-09 66.6 105 35.2
Carub.0007s3075 Capsella rubella HOM05D000589 ORTHO05D001885 1.8e-09 66.6 77 41.6
BolC1t04845H Brassica oleracea HOM05D000589 ORTHO05D001885 2.4e-09 66.2 123 32.5
C03p80460 Brassica napus HOM05D000589 ORTHO05D001885 3.1e-09 65.9 101 35.6
BolC7t46298H Brassica oleracea HOM05D000589 ORTHO05D001885 3.1e-09 65.9 125 32.8
BolC8t49419H Brassica oleracea HOM05D000589 ORTHO05D001885 3.1e-09 65.9 142 33.8
BolC3t12574H Brassica oleracea HOM05D000589 ORTHO05D001885 5.3e-09 65.1 125 35.2
BolC3t17893H Brassica oleracea HOM05D000589 ORTHO05D000401 5.3e-09 65.1 150 30.7
BolC1t02802H Brassica oleracea HOM05D000589 ORTHO05D000401 6.9e-09 64.7 104 33.7
BraA02t07685Z Brassica rapa HOM05D000589 ORTHO05D001885 6.9e-09 64.7 130 32.3
BcaC04g22605 Brassica carinata HOM05D000589 ORTHO05D001885 9.1e-09 64.3 100 37.0
BolC1t01662H Brassica oleracea HOM05D000589 ORTHO05D001885 9.1e-09 64.3 55 52.7
BraA03t15289Z Brassica rapa HOM05D000589 ORTHO05D001885 9.1e-09 64.3 94 37.2
BcaB05g22170 Brassica carinata HOM05D000589 ORTHO05D001885 1.2e-08 63.9 137 28.5
BolC7t43826H Brassica oleracea HOM05D000589 ORTHO05D001885 1.2e-08 63.9 137 29.2
Carub.0005s0910 Capsella rubella HOM05D000589 ORTHO05D001885 1.2e-08 63.9 122 33.6
BcaB07g32763 Brassica carinata HOM05D000589 ORTHO05D001885 1.5e-08 63.5 68 45.6
Carub.0006s2645 Capsella rubella HOM05D000589 ORTHO05D001885 1.5e-08 63.5 55 52.7
BcaC04g20325 Brassica carinata HOM05D000589 ORTHO05D001885 2.0e-08 63.2 126 32.5
BolC3t19856H Brassica oleracea HOM05D000589 ORTHO05D000401 2.0e-08 63.2 125 34.4
BcaC06g33599 Brassica carinata HOM05D000589 ORTHO05D001885 2.6e-08 62.8 123 30.1
BolC8t48273H Brassica oleracea HOM05D000589 ORTHO05D001885 3.4e-08 62.4 55 47.3
BraA09t38531Z Brassica rapa HOM05D000589 ORTHO05D001885 5.9e-08 61.6 113 34.5
BcaB03g15647 Brassica carinata HOM05D000589 ORTHO05D001885 7.7e-08 61.2 59 47.5
C08p03150 Brassica napus HOM05D000930 ORTHO05D000748 7.7e-08 61.2 106 34.0
BcaC05g25861 Brassica carinata HOM05D000589 ORTHO05D001885 1.0e-07 60.8 55 47.3
BolC3t16945H Brassica oleracea HOM05D000589 ORTHO05D001885 1.0e-07 60.8 56 46.4
BolC8t47336H Brassica oleracea HOM05D000589 ORTHO05D000401 1.0e-07 60.8 111 33.3
BraA06t25708Z Brassica rapa HOM05D000589 ORTHO05D001885 1.0e-07 60.8 113 31.9
BcaC07g42449 Brassica carinata HOM05D000589 ORTHO05D001885 1.3e-07 60.5 124 33.9
BcaC08g43983 Brassica carinata HOM05D000589 ORTHO05D001885 1.3e-07 60.5 68 42.6
BolC5t30704H Brassica oleracea HOM05D000589 ORTHO05D000401 1.3e-07 60.5 105 34.3
BolC6t36567H Brassica oleracea HOM05D000589 ORTHO05D001885 1.3e-07 60.5 68 42.6
BolC8t47924H Brassica oleracea HOM05D000589 ORTHO05D000401 1.3e-07 60.5 94 34.0
Carub.0007s3079 Capsella rubella HOM05D000589 ORTHO05D001885 1.3e-07 60.5 128 26.6
BcaC05g28515 Brassica carinata HOM05D000589 ORTHO05D001885 1.7e-07 60.1 124 29.8
BcaNung00166 Brassica carinata HOM05D000589 ORTHO05D001885 1.7e-07 60.1 84 40.5
BolC8t49853H Brassica oleracea HOM05D000589 ORTHO05D001885 1.7e-07 60.1 101 34.7
BcaC08g45577 Brassica carinata HOM05D000589 ORTHO05D001885 2.2e-07 59.7 95 32.6
BolC6t35247H Brassica oleracea HOM05D000589 ORTHO05D001885 2.9e-07 59.3 132 33.3
BolC7t43381H Brassica oleracea HOM05D000589 ORTHO05D001885 2.9e-07 59.3 118 29.7
Carub.0003s1040 Capsella rubella HOM05D000589 ORTHO05D001885 2.9e-07 59.3 55 50.9
Carub.0007s3076 Capsella rubella HOM05D000589 ORTHO05D001885 2.9e-07 59.3 124 33.1
BolC6t37831H Brassica oleracea HOM05D000589 ORTHO05D001885 3.8e-07 58.9 52 53.8
BcaC07g39835 Brassica carinata HOM05D000589 ORTHO05D001885 5.0e-07 58.5 135 29.6
BraA09t40146Z Brassica rapa HOM05D000589 ORTHO05D001885 5.0e-07 58.5 46 52.2
Carub.0007s3086 Capsella rubella HOM05D000589 ORTHO05D001885 5.0e-07 58.5 130 32.3
SpUn1120_0010 Schrenkiella parvula HOM05D017451 ORTHO05D019359 5.0e-07 58.5 123 33.3
BcaC05g28348 Brassica carinata HOM05D000589 ORTHO05D001885 6.5e-07 58.2 134 34.3
BcaC09g51508 Brassica carinata HOM05D000589 ORTHO05D001885 6.5e-07 58.2 100 34.0
BolC3t14145H Brassica oleracea HOM05D000589 ORTHO05D001885 6.5e-07 58.2 52 53.8
BcaB06g25993 Brassica carinata HOM05D000589 ORTHO05D001885 8.5e-07 57.8 125 31.2
BcaC01g05715 Brassica carinata HOM05D000589 ORTHO05D001885 1.1e-06 57.4 56 50.0
BolC1t05118H Brassica oleracea HOM05D000589 ORTHO05D000401 1.1e-06 57.4 112 32.1
BolC2t10463H Brassica oleracea HOM05D000589 ORTHO05D000401 1.1e-06 57.4 140 30.7
BolC7t42427H Brassica oleracea HOM05D000589 ORTHO05D001885 1.1e-06 57.4 123 28.5
BolC9t58427H Brassica oleracea HOM05D000589 ORTHO05D000401 1.1e-06 57.4 55 49.1
BcaC01g00334 Brassica carinata HOM05D000589 ORTHO05D001885 1.4e-06 57.0 125 32.0
BolC1t02335H Brassica oleracea HOM05D000589 ORTHO05D001885 1.4e-06 57.0 55 43.6
BolC9t54041H Brassica oleracea HOM05D000589 ORTHO05D000401 1.4e-06 57.0 54 50.0
BolC9t59088H Brassica oleracea HOM05D000589 ORTHO05D001885 1.4e-06 57.0 105 34.3
BcaC02g11017 Brassica carinata HOM05D000589 ORTHO05D001885 1.9e-06 56.6 91 34.1
BcaC04g21855 Brassica carinata HOM05D000589 ORTHO05D001885 1.9e-06 56.6 55 47.3
BolC4t23737H Brassica oleracea HOM05D000589 ORTHO05D001885 1.9e-06 56.6 91 34.1
BcaB02g07028 Brassica carinata HOM05D000589 ORTHO05D001885 2.5e-06 56.2 138 31.2
A09p69380 Brassica napus HOM05D000696 ORTHO05D001068 2.5e-06 56.2 101 33.7
BolC8t52930H Brassica oleracea HOM05D000696 ORTHO05D001068 2.5e-06 56.2 101 33.7
BcaC08g45778 Brassica carinata HOM05D000589 ORTHO05D001885 3.2e-06 55.8 125 33.6
BolC7t44689H Brassica oleracea HOM05D000589 ORTHO05D001885 3.2e-06 55.8 101 32.7
BolC8t49094H Brassica oleracea HOM05D000589 ORTHO05D000401 3.2e-06 55.8 127 30.7
BraA01t02729Z Brassica rapa HOM05D007462 ORTHO05D002086 3.2e-06 55.8 98 34.7
Carub.0006s2648 Capsella rubella HOM05D000589 ORTHO05D001885 3.2e-06 55.8 122 32.8
SpUn0135_0020 Schrenkiella parvula HOM05D017451 ORTHO05D019359 3.2e-06 55.8 125 34.4
BcaB05g22145 Brassica carinata HOM05D000589 ORTHO05D001885 4.2e-06 55.5 131 32.1
BraA02t07620Z Brassica rapa HOM05D000589 ORTHO05D001885 4.2e-06 55.5 135 31.9
Carub.0001s3710 Capsella rubella HOM05D000589 ORTHO05D001885 4.2e-06 55.5 132 27.3
BcaB04g20296 Brassica carinata HOM05D000589 ORTHO05D001885 5.5e-06 55.1 50 44.0
BolC9t59154H Brassica oleracea HOM05D000214 ORTHO05D000131 5.5e-06 55.1 135 28.9
BcaC05g25220 Brassica carinata HOM05D000589 ORTHO05D001885 7.2e-06 54.7 68 36.8
BcaC05g29003 Brassica carinata HOM05D000589 ORTHO05D001885 7.2e-06 54.7 44 52.3
BolC3t14691H Brassica oleracea HOM05D000589 ORTHO05D000401 7.2e-06 54.7 57 47.4
BolC4t25855H Brassica oleracea HOM05D000589 ORTHO05D001885 7.2e-06 54.7 87 35.6
BcaC08g45938 Brassica carinata HOM05D000589 ORTHO05D001885 9.4e-06 54.3 71 39.4
C07p49130 Brassica napus HOM05D000589 ORTHO05D001885 9.4e-06 54.3 131 29.8
BolC4t25876H Brassica oleracea HOM05D000589 ORTHO05D001885 9.4e-06 54.3 137 29.9
BolC6t38683H Brassica oleracea HOM05D000589 ORTHO05D000401 9.4e-06 54.3 51 49.0
BraA04t17042Z Brassica rapa HOM05D000589 ORTHO05D001885 9.4e-06 54.3 55 45.5
Sp4g09440 Schrenkiella parvula HOM05D001308 ORTHO05D001170 9.4e-06 54.3 132 28.8


User provided reference genes

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