Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G15630 Arabidopsis lyrata HOM05D006500 ORTHO05D008028 4.9e-82 307.8 156 100.0
Carub.0001s0507 Capsella rubella HOM05D006500 ORTHO05D008028 6.2e-77 290.8 155 93.5
AT1G05720 Arabidopsis thaliana HOM05D006500 ORTHO05D008028 3.1e-76 288.5 156 92.3
Thhalv10008926m.g Eutrema salsugineum HOM05D006500 ORTHO05D008028 5.2e-76 287.7 151 93.4
Sp1g04540 Schrenkiella parvula HOM05D006500 ORTHO05D008028 1.2e-75 286.6 154 92.9
BcaC07g42119 Brassica carinata HOM05D006500 ORTHO05D008028 2.0e-75 285.8 154 92.9
BraA09t42063Z Brassica rapa HOM05D006500 ORTHO05D008028 2.9e-74 282.0 153 92.8
CARHR005240 Cardamine hirsuta HOM05D006500 ORTHO05D008028 2.9e-74 282.0 157 90.4
BcaC07g42115 Brassica carinata HOM05D006500 ORTHO05D008028 6.4e-74 280.8 153 92.2
BcaC07g42118 Brassica carinata HOM05D006500 ORTHO05D008028 6.4e-74 280.8 153 92.2
A09p67320 Brassica napus HOM05D006500 ORTHO05D008028 6.4e-74 280.8 153 92.2
C08p51630 Brassica napus HOM05D006500 ORTHO05D008028 6.4e-74 280.8 153 92.2
BolC8t52691H Brassica oleracea HOM05D006500 ORTHO05D008028 6.4e-74 280.8 153 92.2
BcaB03g13492 Brassica carinata HOM05D006500 ORTHO05D008028 1.0e-71 273.5 151 88.1
BcaC07g36846 Brassica carinata HOM05D006500 ORTHO05D008028 2.3e-71 272.3 150 88.0
C08p02210 Brassica napus HOM05D006500 ORTHO05D008028 2.3e-71 272.3 150 88.0
BolC8t47013H Brassica oleracea HOM05D006500 ORTHO05D008028 5.1e-71 271.2 150 87.3
BraA08t35535Z Brassica rapa HOM05D006500 ORTHO05D008028 8.7e-71 270.4 156 86.5
A08p36310 Brassica napus HOM05D006500 ORTHO05D008028 2.8e-69 265.4 156 85.3
THA.LOC104800923 Tarenaya hassleriana HOM05D006500 ORTHO05D008028 2.4e-68 262.3 157 82.2
TWI38G1400 Tripterygium wilfordii HOM05D006500 ORTHO05D008028 4.4e-67 258.1 149 79.2
CSS0014789 Camellia sinensis var. sinensis HOM05D006500 ORTHO05D008028 2.4e-65 252.3 155 75.5
Aa31LG1G8630 Aethionema arabicum HOM05D006500 ORTHO05D008028 1.6e-64 249.6 175 73.7
Potri.013G126900 Populus trichocarpa HOM05D006500 ORTHO05D008028 1.6e-64 249.6 151 75.5
Thecc.04G165600 Theobroma cacao HOM05D006500 ORTHO05D008028 7.8e-64 247.3 137 80.3
GSVIVG01038143001 Vitis vinifera HOM05D006500 ORTHO05D008028 7.8e-64 247.3 149 76.5
Dinv33205 Davidia involucrata HOM05D006500 ORTHO05D008028 1.7e-63 246.1 148 75.7
vmacro00698 Vaccinium macrocarpon HOM05D006500 ORTHO05D008028 1.7e-63 246.1 151 74.8
CANSAT56G1821 Cannabis sativa HOM05D006500 ORTHO05D008028 2.3e-63 245.7 151 76.8
Rhsim09G0010200 Rhododendron simsii HOM05D006500 ORTHO05D008028 3.0e-63 245.4 151 76.2
Duzib268G0518 Durio zibethinus HOM05D006500 ORTHO05D008028 3.9e-63 245.0 138 79.0
Psat7g120240 Pisum sativum HOM05D006500 ORTHO05D008028 6.6e-63 244.2 151 76.8
Cpa.g.sc9.364 Carica papaya HOM05D006500 ORTHO05D008028 8.7e-63 243.8 147 75.5
ClCG06G001100 Citrullus lanatus HOM05D006500 ORTHO05D008028 1.1e-62 243.4 151 72.2
Ciclev10022516m.g Citrus clementina HOM05D006500 ORTHO05D008028 1.1e-62 243.4 163 69.9
Duzib151G0460 Durio zibethinus HOM05D006500 ORTHO05D008028 1.1e-62 243.4 136 80.9
HanXRQChr14g0433631 Helianthus annuus HOM05D003327 ORTHO05D004535 1.1e-62 243.4 145 76.6
CiPaw.02G100400 Carya illinoinensis HOM05D006500 ORTHO05D008028 1.5e-62 243.0 158 72.8
Hma1.2p1_0108F.1_g051720 Hydrangea macrophylla HOM05D006500 ORTHO05D008028 1.5e-62 243.0 151 75.5
Potri.019G112100 Populus trichocarpa HOM05D006500 ORTHO05D008028 1.5e-62 243.0 149 73.2
Sabra19G0108100 Salix brachista HOM05D006500 ORTHO05D008028 1.5e-62 243.0 149 73.8
Lj4g0023361 Lotus japonicus HOM05D006500 ORTHO05D008028 1.9e-62 242.7 151 73.5
Sed0015541 Sechium edule HOM05D006500 ORTHO05D008028 2.5e-62 242.3 153 73.9
Gohir.A05G327700 Gossypium hirsutum HOM05D006500 ORTHO05D008028 3.3e-62 241.9 155 71.6
SalBow3G2241 Salvia bowleyana HOM05D006500 ORTHO05D008028 3.3e-62 241.9 145 76.6
SGA_v2.0_scaffold283G46959 Striga asiatica HOM05D006500 ORTHO05D008028 3.3e-62 241.9 152 73.0
DCAR_023930 Daucus carota HOM05D006500 ORTHO05D008028 4.3e-62 241.5 149 73.2
MD17G1177800 Malus domestica HOM05D006500 ORTHO05D008028 4.3e-62 241.5 154 75.3
Sed0014008 Sechium edule HOM05D006500 ORTHO05D008028 5.6e-62 241.1 154 74.0
CiPaw.01G170700 Carya illinoinensis HOM05D006500 ORTHO05D008028 7.3e-62 240.7 158 72.2
Eucgr.A00110 Eucalyptus grandis HOM05D006500 ORTHO05D008028 7.3e-62 240.7 152 73.0
Eucgr.A00287 Eucalyptus grandis HOM05D006500 ORTHO05D008028 7.3e-62 240.7 152 73.0
Atru.chr4.1419 Acer truncatum HOM05D006500 ORTHO05D008028 9.6e-62 240.4 149 73.8
Actinidia27113 Actinidia chinensis HOM05D006500 ORTHO05D008028 1.3e-61 240.0 156 73.1
MELO3C022425.2 Cucumis melo HOM05D006500 ORTHO05D008028 1.3e-61 240.0 148 74.3
MSTRG.4301 Avicennia marina HOM05D006500 ORTHO05D008028 1.6e-61 239.6 145 75.2
RcHm_v2.0_Chr4g0405941 Rosa chinensis HOM05D006500 ORTHO05D008028 1.6e-61 239.6 153 72.5
CsaV3_6G007030 Cucumis sativus L. HOM05D006500 ORTHO05D008028 2.1e-61 239.2 148 73.6
Gohir.D05G327900 Gossypium hirsutum HOM05D006500 ORTHO05D008028 2.1e-61 239.2 153 71.9
Gorai.009G351800 Gossypium raimondii HOM05D006500 ORTHO05D008028 2.1e-61 239.2 153 71.9
TAR365G1104 Trochodendron aralioides HOM05D006500 ORTHO05D008028 2.8e-61 238.8 155 70.3
COL.COLO4_08138 Corchorus olitorius HOM05D006500 ORTHO05D008028 4.8e-61 238.0 147 74.8
FvH4_4g10450 Fragaria vesca HOM05D006500 ORTHO05D008028 4.8e-61 238.0 149 75.2
Lsat_1_v5_gn_1_74920 Lactuca sativa HOM05D006500 ORTHO05D008028 8.1e-61 237.3 152 71.7
MD04G1049100 Malus domestica HOM05D006500 ORTHO05D008028 8.1e-61 237.3 152 73.0
FAN12G2511 Fragaria x ananassa HOM05D006500 ORTHO05D008028 1.1e-60 236.9 149 74.5
QL10p055774 Quercus lobata HOM05D006500 ORTHO05D008028 1.1e-60 236.9 149 73.2
VMungo0251G2572 Vigna mungo HOM05D006500 ORTHO05D008028 1.1e-60 236.9 151 70.9
FAN17G0772 Fragaria x ananassa HOM05D006500 ORTHO05D008028 1.4e-60 236.5 149 74.5
Manes.11G129200 Manihot esculenta HOM05D006500 ORTHO05D008028 1.4e-60 236.5 146 72.6
Medtr4g087310 Medicago truncatula HOM05D006500 ORTHO05D008028 1.4e-60 236.5 153 73.2
Prupe.1G207200 Prunus persica HOM05D006500 ORTHO05D008028 1.4e-60 236.5 153 73.9
Migut.G01179 Erythranthe guttata HOM05D006500 ORTHO05D008028 1.8e-60 236.1 145 71.7
arahy.Tifrunner.gnm1.ann1.A3K5YX Arachis hypogaea HOM05D006500 ORTHO05D008028 2.4e-60 235.7 151 73.5
arahy.Tifrunner.gnm1.ann1.SHKR8E Arachis hypogaea HOM05D006500 ORTHO05D008028 2.4e-60 235.7 151 73.5
Phvul.003G296700 Phaseolus vulgaris HOM05D006500 ORTHO05D008028 2.4e-60 235.7 151 72.2
Glyma.02G137600 Glycine max HOM05D006500 ORTHO05D008028 3.1e-60 235.3 154 72.7
Lalb_Chr09g0328101 Lupinus albus HOM05D006500 ORTHO05D008028 3.1e-60 235.3 151 70.9
Aqoxy2G00124 Aquilegia oxysepala HOM05D006500 ORTHO05D008028 4.0e-60 235.0 150 69.3
Glyma.07G207800 Glycine max HOM05D006500 ORTHO05D008028 4.0e-60 235.0 151 71.5
CAN.G136.13 Capsicum annuum HOM05D006500 ORTHO05D008028 5.3e-60 234.6 154 72.1
Oeu015723.1 Olea europaea HOM05D006500 ORTHO05D008028 5.3e-60 234.6 141 74.5
EL10Ac3g06088 Beta vulgaris HOM05D006500 ORTHO05D008028 6.9e-60 234.2 154 73.4
Nitab4.5_0001586g0010 Nicotiana tabacum HOM05D006500 ORTHO05D008028 6.9e-60 234.2 155 72.3
Sc25g0002800 Simmondsia chinensis HOM05D006500 ORTHO05D008028 6.9e-60 234.2 147 73.5
Oeu050336.1 Olea europaea HOM05D006500 ORTHO05D008028 9.0e-60 233.8 151 72.2
Peaxi162Scf00180g00116 Petunia axillaris HOM05D006500 ORTHO05D008028 1.5e-59 233.0 153 71.2
Nn1g09644 Nelumbo nucifera HOM05D006500 ORTHO05D008028 2.0e-59 232.6 155 67.7
Solyc06g053430.4 Solanum lycopersicum HOM05D006500 ORTHO05D008028 2.0e-59 232.6 154 72.1
Sopen06g018490 Solanum pennellii HOM05D006500 ORTHO05D008028 2.0e-59 232.6 154 72.1
PGSC0003DMG400016334 Solanum tuberosum HOM05D006500 ORTHO05D008028 2.0e-59 232.6 154 72.1
Ca_18638_v3 Cicer arietinum L. HOM05D006500 ORTHO05D008028 5.8e-59 231.1 141 74.5
Nitab4.5_0002544g0040 Nicotiana tabacum HOM05D006500 ORTHO05D008028 7.6e-59 230.7 137 77.4
Hund03202 Selenicereus undatus HOM05D006500 ORTHO05D008028 9.9e-59 230.3 149 72.5
AUR62002395 Chenopodium quinoa HOM05D006500 ORTHO05D008028 2.2e-58 229.2 153 71.2
AUR62023794 Chenopodium quinoa HOM05D006500 ORTHO05D008028 2.9e-58 228.8 153 71.2
Cc03_g14120 Coffea canephora HOM05D006500 ORTHO05D008028 4.2e-57 224.9 159 69.2
ECA248G2222 Erigeron canadensis HOM05D000003 ORTHO05D008028 4.2e-57 224.9 134 73.9
PSO675G9108 Papaver somniferum HOM05D006500 ORTHO05D008028 3.5e-56 221.9 144 68.1
CDE04G3295 Ceratophyllum demersum HOM05D006500 ORTHO05D008028 6.0e-56 221.1 148 66.9
ATR0743G133 Amborella trichopoda HOM05D006500 ORTHO05D008028 1.0e-55 220.3 156 64.7
PSO732G0103 Papaver somniferum HOM05D006500 ORTHO05D008028 1.0e-55 220.3 144 68.1
HPP92_003580 Vanilla planifolia HOM05D006500 ORTHO05D008028 1.8e-55 219.5 147 68.7
FAN22G1805 Fragaria x ananassa HOM05D006500 ORTHO05D008028 1.5e-54 216.5 196 57.1
PGR083G1262 Punica granatum HOM05D006500 ORTHO05D008028 1.5e-54 216.5 149 67.8
FAN12G1276 Fragaria x ananassa HOM05D006500 ORTHO05D008028 3.3e-54 215.3 201 56.2
SEGI_07767 Sequoiadendron giganteum HOM05D006500 ORTHO05D008028 9.6e-54 213.8 137 71.5
Zm00001eb144900 Zea mays HOM05D006500 ORTHO05D008028 1.3e-53 213.4 146 66.4
FAN07G0402 Fragaria x ananassa HOM05D006500 ORTHO05D008028 2.1e-53 212.6 196 56.6
unitig_46.g18636 Utricularia gibba HOM05D006500 ORTHO05D008028 8.1e-53 210.7 149 67.1
BcaC07g42121 Brassica carinata HOM05D006500 ORTHO05D008028 3.1e-52 208.8 153 73.9
Os01g0894500 Oryza sativa ssp. japonica HOM05D006500 ORTHO05D008028 5.3e-52 208.0 147 63.9
Lj3A158T10 Lonicera japonica HOM05D006500 ORTHO05D008028 9.0e-52 207.2 121 81.8
SMO119G0117 Selaginella moellendorffii HOM05D006500 ORTHO05D008028 9.6e-46 187.2 127 65.4
MBI08_g33171_MAGBIO Magnolia biondii HOM05D006500 ORTHO05D008028 3.4e-43 178.7 104 76.9
Pp3c14_2450 Physcomitrium patens HOM05D006500 ORTHO05D008028 4.5e-43 178.3 130 59.2
Haze_01362 Corylus avellana HOM05D006500 ORTHO05D008028 2.2e-42 176.0 149 60.4
TPR.G23526 Trifolium pratense HOM05D006500 ORTHO05D008028 8.4e-42 174.1 97 78.4
Nn1g09666 Nelumbo nucifera HOM05D006500 ORTHO05D008028 4.2e-33 145.2 84 73.8
Ciclev10023175m.g Citrus clementina HOM05D006500 ORTHO05D008028 6.1e-24 114.8 72 70.8
SHI33478 Sapria himalayana HOM05D000105 ORTHO05D000023 5.1e-23 111.7 83 61.4
Cre01.g038950 Chlamydomonas reinhardtii HOM05D006500 ORTHO05D008028 1.2e-16 90.5 150 36.0
CAN.G701.5 Capsicum annuum HOM05D006500 ORTHO05D008028 3.9e-15 85.5 78 52.6
CBR_g27901 Chara braunii HOM05D006500 ORTHO05D008028 2.0e-11 73.2 127 32.3


User provided reference genes

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