Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G15280 Arabidopsis lyrata HOM05D005574 ORTHO05D007102 2.0e-190 669.1 376 100.0
Sp1g04310 Schrenkiella parvula HOM05D005574 ORTHO05D007102 8.3e-144 514.2 379 75.5
AT1G05440 Arabidopsis thaliana HOM05D005574 ORTHO05D007102 2.2e-136 489.6 379 77.6
Carub.0001s0477 Capsella rubella HOM05D005574 ORTHO05D007102 4.3e-132 475.3 382 74.6
Thhalv10002568m.g Eutrema salsugineum HOM05D005574 ORTHO05D007102 9.5e-132 474.2 379 72.0
CARHR004930 Cardamine hirsuta HOM05D005574 ORTHO05D007102 3.6e-131 472.2 376 71.0
BcaB02g06860 Brassica carinata HOM05D005574 ORTHO05D007102 3.7e-128 462.2 355 70.7
BcaC05g24386 Brassica carinata HOM05D005574 ORTHO05D007102 7.8e-126 454.5 350 70.9
C05p03780 Brassica napus HOM05D005574 ORTHO05D007102 7.8e-126 454.5 350 70.9
BolC5t29155H Brassica oleracea HOM05D005574 ORTHO05D007102 7.8e-126 454.5 350 70.9
A10p04140 Brassica napus HOM05D005574 ORTHO05D007102 4.6e-118 428.7 349 70.2
THA.LOC104800960 Tarenaya hassleriana HOM05D005574 ORTHO05D007102 1.3e-117 427.2 376 60.6
BraA10t42684Z Brassica rapa HOM05D005574 ORTHO05D007102 1.7e-117 426.8 349 69.9
Aa31LG1G19200 Aethionema arabicum HOM05D005574 ORTHO05D007102 1.7e-96 357.1 328 59.1
Ciclev10005241m.g Citrus clementina HOM05D005574 ORTHO05D007102 8.2e-83 311.6 348 51.1
Atru.chr4.2447 Acer truncatum HOM05D005574 ORTHO05D007102 6.9e-82 308.5 358 47.8
Potri.010G086100 Populus trichocarpa HOM05D005574 ORTHO05D007102 1.2e-81 307.8 331 50.5
Sabra10G0057600 Salix brachista HOM05D005574 ORTHO05D007102 4.6e-78 295.8 331 48.9
COL.COLO4_05700 Corchorus olitorius HOM05D005574 ORTHO05D007102 1.8e-77 293.9 354 47.5
QL06p002087 Quercus lobata HOM05D005574 ORTHO05D007102 5.1e-77 292.4 351 47.3
Thecc.04G192400 Theobroma cacao HOM05D005574 ORTHO05D007102 9.7e-76 288.1 346 46.8
TWI53G0495 Tripterygium wilfordii HOM05D005574 ORTHO05D007102 2.8e-75 286.6 347 45.5
Nn6g34090 Nelumbo nucifera HOM05D005574 ORTHO05D007102 6.9e-74 282.0 337 43.6
MELO3C006525.2 Cucumis melo HOM05D005574 ORTHO05D007102 1.2e-73 281.2 349 46.1
CsaV3_3G013190 Cucumis sativus L. HOM05D005574 ORTHO05D007102 1.5e-73 280.8 349 46.1
Duzib268G0255 Durio zibethinus HOM05D005574 ORTHO05D007102 4.5e-73 279.3 356 45.8
Hma1.2p1_0602F.1_g187410 Hydrangea macrophylla HOM05D005574 ORTHO05D007102 4.5e-73 279.3 341 48.7
GSVIVG01017997001 Vitis vinifera HOM05D005574 ORTHO05D007102 4.5e-73 279.3 350 45.1
CiPaw.02G098000 Carya illinoinensis HOM05D005574 ORTHO05D007102 5.9e-73 278.9 383 44.4
Cfa015664 Carpinus fangiana HOM05D005574 ORTHO05D007102 7.7e-73 278.5 379 45.6
ClCG05G005090 Citrullus lanatus HOM05D005574 ORTHO05D007102 1.0e-72 278.1 349 45.3
Gohir.A10G129500 Gossypium hirsutum HOM05D005574 ORTHO05D007102 1.0e-72 278.1 349 46.4
Gorai.011G151700 Gossypium raimondii HOM05D005574 ORTHO05D007102 1.0e-72 278.1 349 47.0
Gohir.D10G136700 Gossypium hirsutum HOM05D005574 ORTHO05D007102 2.9e-72 276.6 349 47.0
Haze_00883 Corylus avellana HOM05D005574 ORTHO05D007102 8.5e-72 275.0 379 45.1
Sed0003604 Sechium edule HOM05D005574 ORTHO05D007102 4.2e-71 272.7 352 44.0
FAN07G2976 Fragaria x ananassa HOM05D005574 ORTHO05D007102 2.7e-70 270.0 354 45.5
Sed0027704 Sechium edule HOM05D005574 ORTHO05D007102 2.7e-70 270.0 346 43.9
CSS0019466 Camellia sinensis var. sinensis HOM05D005574 ORTHO05D007102 1.8e-69 267.3 368 44.3
Glyma.20G147200 Glycine max HOM05D005574 ORTHO05D007102 1.8e-69 267.3 332 44.9
FAN02G2947 Fragaria x ananassa HOM05D005574 ORTHO05D007102 2.3e-69 266.9 354 44.9
Prupe.1G015700 Prunus persica HOM05D005574 ORTHO05D007102 2.3e-69 266.9 350 46.0
Dinv44545 Davidia involucrata HOM05D005574 ORTHO05D007102 3.0e-69 266.5 349 44.7
MD16G1195700 Malus domestica HOM05D005574 ORTHO05D007102 5.1e-69 265.8 350 44.9
DCAR_030644 Daucus carota HOM05D005574 ORTHO05D007102 6.7e-69 265.4 348 46.3
Glyma.10G247300 Glycine max HOM05D005574 ORTHO05D007102 6.7e-69 265.4 358 43.0
RcHm_v2.0_Chr4g0415861 Rosa chinensis HOM05D005574 ORTHO05D007102 2.5e-68 263.5 350 44.9
Phvul.007G058100 Phaseolus vulgaris HOM05D005574 ORTHO05D007102 3.3e-68 263.1 349 43.0
VMungo0720G0566 Vigna mungo HOM05D005574 ORTHO05D007102 4.3e-68 262.7 330 44.8
FvH4_4g16270 Fragaria vesca HOM05D005574 ORTHO05D007102 5.7e-68 262.3 381 44.1
FAN12G0525 Fragaria x ananassa HOM05D005574 ORTHO05D007102 5.7e-68 262.3 381 42.8
FAN12G2145 Fragaria x ananassa HOM05D005574 ORTHO05D007102 5.7e-68 262.3 381 42.8
FAN12G2997 Fragaria x ananassa HOM05D005574 ORTHO05D007102 5.7e-68 262.3 381 42.8
Peaxi162Scf00092g00614 Petunia axillaris HOM05D005574 ORTHO05D007102 1.3e-67 261.2 336 43.2
CANSAT78G2217 Cannabis sativa HOM05D005574 ORTHO05D007102 1.7e-67 260.8 329 42.6
arahy.Tifrunner.gnm1.ann1.R5YE9W Arachis hypogaea HOM05D005574 ORTHO05D007102 3.7e-67 259.6 346 43.1
Rhsim04G0201500 Rhododendron simsii HOM05D005574 ORTHO05D007102 6.3e-67 258.8 345 44.6
arahy.Tifrunner.gnm1.ann1.PUQJ4X Arachis hypogaea HOM05D005574 ORTHO05D007102 1.8e-66 257.3 347 42.4
MD13G1194900 Malus domestica HOM05D005574 ORTHO05D007102 9.1e-66 255.0 352 44.3
Hund12118 Selenicereus undatus HOM05D005574 ORTHO05D007102 9.1e-66 255.0 377 43.2
AUR62034712 Chenopodium quinoa HOM05D005574 ORTHO05D007102 3.4e-65 253.1 347 43.2
Cc03_g03930 Coffea canephora HOM05D005574 ORTHO05D007102 4.5e-65 252.7 335 44.2
AUR62033680 Chenopodium quinoa HOM05D005574 ORTHO05D007102 1.7e-64 250.8 291 47.4
Sopen09g031060 Solanum pennellii HOM05D005574 ORTHO05D007102 1.7e-64 250.8 340 40.9
Ah.13g071610 Amaranthus hybridus HOM05D005574 ORTHO05D007102 3.8e-64 249.6 353 41.6
Ca_10888_v3 Cicer arietinum L. HOM05D005574 ORTHO05D007102 1.1e-63 248.1 327 42.2
Solyc09g082180.3 Solanum lycopersicum HOM05D005574 ORTHO05D007102 1.4e-63 247.7 333 40.8
TAR362G0087 Trochodendron aralioides HOM05D005574 ORTHO05D007102 1.9e-63 247.3 328 46.3
Lj5g0023935 Lotus japonicus HOM05D005574 ORTHO05D007102 5.5e-63 245.7 348 44.5
Manes.03G177100 Manihot esculenta HOM05D005574 ORTHO05D007102 7.2e-63 245.4 348 42.0
Nitab4.5_0004135g0020 Nicotiana tabacum HOM05D005574 ORTHO05D007102 9.4e-63 245.0 339 41.3
TPR.G5479 Trifolium pratense HOM05D005574 ORTHO05D007102 1.6e-62 244.2 336 39.6
Medtr1g103560 Medicago truncatula HOM05D005574 ORTHO05D007102 2.1e-62 243.8 321 42.4
Nitab4.5_0001920g0060 Nicotiana tabacum HOM05D005574 ORTHO05D007102 2.7e-62 243.4 339 41.6
MSTRG.4036 Avicennia marina HOM05D005574 ORTHO05D007102 4.7e-62 242.7 358 41.1
EL10Ac3g06494 Beta vulgaris HOM05D005574 ORTHO05D007102 7.9e-62 241.9 342 39.5
Actinidia23520 Actinidia chinensis HOM05D005574 ORTHO05D007102 3.0e-61 240.0 357 40.9
PSO210G4004 Papaver somniferum HOM05D005574 ORTHO05D007102 3.0e-61 240.0 336 41.7
Psat6g206920 Pisum sativum HOM05D005574 ORTHO05D007102 3.3e-60 236.5 336 39.0
Oeu058969.1 Olea europaea HOM05D005574 ORTHO05D007102 2.2e-59 233.8 350 40.6
Migut.G00347 Erythranthe guttata HOM05D005574 ORTHO05D007102 2.8e-59 233.4 343 41.4
SalBow2G1029 Salvia bowleyana HOM05D005574 ORTHO05D007102 8.2e-59 231.9 345 40.3
Aqoxy2G03411 Aquilegia oxysepala HOM05D005574 ORTHO05D007102 5.3e-58 229.2 325 39.7
Lalb_Chr02g0140631 Lupinus albus HOM05D005574 ORTHO05D007102 2.6e-57 226.9 373 36.2
Duzib151G0572 Durio zibethinus HOM05D005574 ORTHO05D007102 1.0e-56 224.9 322 42.5
Dinv14005 Davidia involucrata HOM05D005574 ORTHO05D007102 1.7e-56 224.2 339 41.9
Lsat_1_v5_gn_5_104360 Lactuca sativa HOM05D005574 ORTHO05D007102 1.6e-54 217.6 333 39.3
MSTRG.9977 Avicennia marina HOM05D005574 ORTHO05D007102 6.1e-54 215.7 325 39.4
PSO761G0453 Papaver somniferum HOM05D005574 ORTHO05D007102 6.1e-54 215.7 356 38.2
Sc19g0004060 Simmondsia chinensis HOM05D005574 ORTHO05D007102 1.0e-53 214.9 309 41.7
SGA_v2.0_scaffold257G45710 Striga asiatica HOM05D005574 ORTHO05D007102 4.0e-53 213.0 347 37.5
CDE07G0532 Ceratophyllum demersum HOM05D005574 ORTHO05D007102 5.2e-53 212.6 312 41.3
BolC5t33236H Brassica oleracea HOM05D005574 ORTHO05D007102 1.3e-51 208.0 208 52.4
Eucgr.B01081 Eucalyptus grandis HOM05D005574 ORTHO05D007102 2.2e-51 207.2 316 39.6
Potri.008G154400 Populus trichocarpa HOM05D005574 ORTHO05D007102 2.8e-51 206.8 248 48.0
BolC1t04542H Brassica oleracea HOM05D005574 ORTHO05D007102 1.1e-50 204.9 262 44.7
HanXRQChr10g0294751 Helianthus annuus HOM05D005574 ORTHO05D007102 7.0e-50 202.2 345 40.3
ECA234G0493 Erigeron canadensis HOM05D005574 ORTHO05D007102 3.5e-49 199.9 313 41.2
C01p35960 Brassica napus HOM05D005574 ORTHO05D007102 2.7e-46 190.3 184 52.2
PGR142G0953 Punica granatum HOM05D005574 ORTHO05D007102 7.5e-44 182.2 329 36.2
CAN.G2204.2 Capsicum annuum HOM05D000340 ORTHO05D007102 6.3e-43 179.1 206 42.2
ATR0697G187 Amborella trichopoda HOM05D005574 ORTHO05D007102 2.0e-41 174.1 305 39.3
CAN.G2204.4 Capsicum annuum HOM05D005574 ORTHO05D007102 2.5e-39 167.2 275 36.7
MBI15_g31435_MAGBIO Magnolia biondii HOM05D005574 ORTHO05D007102 3.6e-38 163.3 271 38.4
BcaB07g33702 Brassica carinata HOM05D005574 ORTHO05D007102 6.1e-38 162.5 200 48.0
CDE06G2673 Ceratophyllum demersum HOM05D005574 ORTHO05D007102 1.2e-36 158.3 251 39.4
HPP92_009613 Vanilla planifolia HOM05D005574 ORTHO05D007102 3.4e-36 156.8 337 33.2
BcaC07g42131 Brassica carinata HOM05D005574 ORTHO05D007102 1.3e-35 154.8 113 68.1
C08p51720 Brassica napus HOM05D005574 ORTHO05D007102 1.3e-35 154.8 113 68.1
SEGI_38250 Sequoiadendron giganteum HOM05D005574 ORTHO05D007102 2.2e-35 154.1 331 32.3
A09p67440 Brassica napus HOM05D005574 ORTHO05D007102 4.5e-33 146.4 102 71.6
C03p05690 Brassica napus HOM05D005574 ORTHO05D022054 1.5e-31 141.4 129 54.3
BcaC09g49493 Brassica carinata HOM05D005574 ORTHO05D007102 1.9e-31 141.0 166 47.0
ECA234G4095 Erigeron canadensis HOM05D005574 ORTHO05D007102 1.2e-30 138.3 175 43.4
SMO174G0025 Selaginella moellendorffii HOM05D005574 ORTHO05D007102 1.6e-30 137.9 318 28.9
Cpa.g.sc58.90 Carica papaya HOM05D005574 ORTHO05D007102 3.0e-29 133.7 132 50.0
BolC1t03554H Brassica oleracea HOM05D005574 ORTHO05D022054 4.0e-29 133.3 121 54.5
unitig_32.g11728 Utricularia gibba HOM05D005574 ORTHO05D007102 4.0e-29 133.3 379 30.6
BolC3t13081H Brassica oleracea HOM05D005574 ORTHO05D007102 1.2e-28 131.7 124 55.6
Os03g0747100 Oryza sativa ssp. japonica HOM05D005574 ORTHO05D007102 1.2e-28 131.7 330 32.7
Zm00001eb057090 Zea mays HOM05D005574 ORTHO05D007102 2.6e-28 130.6 333 30.0
A03p47670 Brassica napus HOM05D005574 ORTHO05D007102 3.4e-28 130.2 113 57.5
BraA09t37853Z Brassica rapa HOM05D005574 ORTHO05D007102 3.4e-28 130.2 113 57.5
A02p27770 Brassica napus HOM05D005574 ORTHO05D007102 4.4e-28 129.8 113 59.3
BraA02t07818Z Brassica rapa HOM05D005574 ORTHO05D007102 4.4e-28 129.8 113 59.3
BraA07t27929Z Brassica rapa HOM05D005574 ORTHO05D007102 2.2e-27 127.5 113 58.4
BraA09t41109Z Brassica rapa HOM05D005574 ORTHO05D007102 3.7e-27 126.7 113 58.4
C01p45800 Brassica napus HOM05D005574 ORTHO05D007102 1.4e-26 124.8 184 39.1
Actinidia40140 Actinidia chinensis HOM05D005574 ORTHO05D007102 4.1e-26 123.2 140 46.4
BcaC09g48798 Brassica carinata HOM05D005574 ORTHO05D007102 8.6e-24 115.5 101 55.4
AagrBONN_evm.TU.Sc2ySwM_117.3111 Anthoceros agrestis HOM05D005574 ORTHO05D007102 1.1e-23 115.2 269 30.5
BcaC07g42130 Brassica carinata HOM05D005574 ORTHO05D007102 2.1e-22 110.9 113 55.8
A09p57160 Brassica napus HOM05D005574 ORTHO05D007102 1.9e-18 97.8 75 64.0
C09p41690 Brassica napus HOM05D005574 ORTHO05D022054 3.0e-08 63.9 61 49.2
Sabra08G0117800 Salix brachista HOM05D000633 ORTHO05D000477 3.0e-08 63.9 82 43.9
BolC1t03555H Brassica oleracea HOM05D005574 ORTHO05D007102 1.2e-06 58.5 124 33.9


User provided reference genes

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