Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G13180 Arabidopsis lyrata HOM05D006713 ORTHO05D008601 8.5e-229 796.6 382 100.0
AT1G03687 Arabidopsis thaliana HOM05D006713 ORTHO05D008601 1.4e-210 736.1 382 92.4
CARHR003020 Cardamine hirsuta HOM05D006713 ORTHO05D008601 5.2e-202 707.6 382 89.0
Carub.0001s0279 Capsella rubella HOM05D006713 ORTHO05D008601 3.1e-199 698.4 351 94.0
Thhalv10007899m.g Eutrema salsugineum HOM05D006713 ORTHO05D008601 3.3e-196 688.3 384 85.9
Sp1g02570 Schrenkiella parvula HOM05D006713 ORTHO05D008601 1.2e-195 686.4 382 87.2
BcaC07g42233 Brassica carinata HOM05D006713 ORTHO05D008601 6.4e-192 674.1 382 85.1
BcaC07g42238 Brassica carinata HOM05D006713 ORTHO05D008601 1.6e-190 669.5 389 83.5
BolC8t52795H Brassica oleracea HOM05D006713 ORTHO05D008601 1.6e-190 669.5 389 83.5
C08p52690 Brassica napus HOM05D006713 ORTHO05D008601 6.6e-189 664.1 389 82.8
BraA09t42160Z Brassica rapa HOM05D006713 ORTHO05D008601 6.2e-187 657.5 388 82.2
A09p68250 Brassica napus HOM05D006713 ORTHO05D008601 2.3e-186 655.6 388 82.0
Aa31LG1G20990 Aethionema arabicum HOM05D006713 ORTHO05D008601 2.0e-185 652.5 387 81.7
THA.LOC104815960 Tarenaya hassleriana HOM05D006713 ORTHO05D008601 1.6e-171 606.3 380 77.9
Atru.chr6.3001 Acer truncatum HOM05D006713 ORTHO05D008601 2.5e-148 529.3 358 70.9
Gohir.D02G180200 Gossypium hirsutum HOM05D006713 ORTHO05D008601 1.6e-139 500.0 383 64.8
Gohir.A03G157000 Gossypium hirsutum HOM05D006713 ORTHO05D008601 2.8e-139 499.2 383 64.0
Ciclev10015547m.g Citrus clementina HOM05D006713 ORTHO05D008601 8.2e-139 497.7 353 65.4
Gorai.005G201900 Gossypium raimondii HOM05D006713 ORTHO05D008601 1.1e-138 497.3 383 64.0
QL08p038662 Quercus lobata HOM05D006713 ORTHO05D008601 1.1e-138 497.3 367 65.4
QL02p049491 Quercus lobata HOM05D006713 ORTHO05D008601 2.4e-138 496.1 352 67.3
TAR235G0002 Trochodendron aralioides HOM05D006713 ORTHO05D008601 6.9e-138 494.6 390 63.3
CSS0037354 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 1.5e-137 493.4 355 67.9
Eucgr.A01814 Eucalyptus grandis HOM05D006713 ORTHO05D008601 2.0e-137 493.0 335 69.0
Duzib052G0863 Durio zibethinus HOM05D006713 ORTHO05D008601 4.2e-135 485.3 330 69.4
Glyma.13G297500 Glycine max HOM05D006713 ORTHO05D008601 7.9e-134 481.1 328 70.7
RcHm_v2.0_Chr2g0126401 Rosa chinensis HOM05D006713 ORTHO05D008601 7.9e-134 481.1 373 63.8
GSVIVG01020539001 Vitis vinifera HOM05D006713 ORTHO05D008601 7.9e-134 481.1 356 66.9
TWI18G1058 Tripterygium wilfordii HOM05D006713 ORTHO05D008601 1.3e-133 480.3 346 65.9
Dinv26425 Davidia involucrata HOM05D006713 ORTHO05D008601 5.1e-133 478.4 355 66.2
MD17G1241000 Malus domestica HOM05D006713 ORTHO05D008601 1.9e-132 476.5 385 62.1
Cpa.g.sc34.156 Carica papaya HOM05D006713 ORTHO05D008601 2.5e-132 476.1 329 69.0
Nn1g06572 Nelumbo nucifera HOM05D006713 ORTHO05D008601 2.5e-132 476.1 357 65.8
Lalb_Chr14g0366891 Lupinus albus HOM05D006713 ORTHO05D008601 3.7e-131 472.2 340 67.6
FAN05G2673 Fragaria x ananassa HOM05D006713 ORTHO05D008601 4.8e-131 471.9 377 62.1
Hma1.2p1_1201F.1_g266570 Hydrangea macrophylla HOM05D006713 ORTHO05D008601 8.2e-131 471.1 382 62.0
Potri.013G132100 Populus trichocarpa HOM05D006713 ORTHO05D008601 1.4e-130 470.3 353 65.2
FvH4_6g26190 Fragaria vesca HOM05D006713 ORTHO05D008601 1.8e-130 469.9 373 62.2
Lj3g0026133 Lotus japonicus HOM05D006713 ORTHO05D008601 1.8e-130 469.9 372 62.4
Actinidia09856 Actinidia chinensis HOM05D006713 ORTHO05D008601 2.4e-130 469.5 335 68.1
arahy.Tifrunner.gnm1.ann1.Q4ZJSX Arachis hypogaea HOM05D006713 ORTHO05D008601 2.4e-130 469.5 330 69.4
arahy.Tifrunner.gnm1.ann1.FW5TAU Arachis hypogaea HOM05D006713 ORTHO05D008601 3.1e-130 469.2 330 68.8
Rhsim06G0143600 Rhododendron simsii HOM05D006713 ORTHO05D008601 6.9e-130 468.0 344 66.9
VMungo1080G0618 Vigna mungo HOM05D006713 ORTHO05D008601 2.9e-128 462.6 328 68.3
Ah.01g015180 Amaranthus hybridus HOM05D006713 ORTHO05D008601 5.0e-128 461.8 329 66.3
CANSAT78G0617 Cannabis sativa HOM05D006713 ORTHO05D008601 6.5e-128 461.5 386 59.6
FAN09G0901 Fragaria x ananassa HOM05D006713 ORTHO05D008601 6.5e-128 461.5 371 62.0
vmacro12297 Vaccinium macrocarpon HOM05D006713 ORTHO05D008601 1.9e-127 459.9 359 64.6
Medtr2g090335 Medicago truncatula HOM05D006713 ORTHO05D008601 2.5e-127 459.5 327 67.0
Sabra13G0111600 Salix brachista HOM05D006713 ORTHO05D008601 3.2e-127 459.1 381 60.4
Sc21g0002760 Simmondsia chinensis HOM05D006713 ORTHO05D008601 2.1e-126 456.4 367 58.6
FAN02G3934 Fragaria x ananassa HOM05D006713 ORTHO05D008601 6.1e-126 454.9 360 61.7
Aqoxy1G02470 Aquilegia oxysepala HOM05D006713 ORTHO05D008601 1.0e-125 454.1 362 61.9
HanXRQChr17g0556501 Helianthus annuus HOM05D006713 ORTHO05D008601 2.0e-124 449.9 333 65.2
MBI06_g06484_MAGBIO Magnolia biondii HOM05D006713 ORTHO05D008601 2.0e-124 449.9 352 63.1
Psat5g271440 Pisum sativum HOM05D006713 ORTHO05D008601 2.5e-124 449.5 327 66.4
Migut.H01188 Erythranthe guttata HOM05D006713 ORTHO05D008601 1.7e-123 446.8 331 62.5
CsaV3_6G012990 Cucumis sativus L. HOM05D006713 ORTHO05D008601 3.7e-123 445.7 334 64.1
EL10Ac9g20760 Beta vulgaris HOM05D006713 ORTHO05D008601 4.8e-123 445.3 390 56.7
Lsat_1_v5_gn_8_133201 Lactuca sativa HOM05D006713 ORTHO05D008601 1.8e-122 443.4 327 64.8
DCAR_021241 Daucus carota HOM05D006713 ORTHO05D008601 1.2e-121 440.7 351 61.8
ECA234G3347 Erigeron canadensis HOM05D006713 ORTHO05D008601 4.5e-121 438.7 333 63.1
CAN.G248.32 Capsicum annuum HOM05D006713 ORTHO05D008601 1.0e-120 437.6 342 60.5
PGSC0003DMG400018345 Solanum tuberosum HOM05D006713 ORTHO05D008601 8.5e-120 434.5 343 60.1
Peaxi162Scf00132g00240 Petunia axillaris HOM05D006713 ORTHO05D008601 1.4e-119 433.7 326 62.6
MSTRG.12823 Avicennia marina HOM05D006713 ORTHO05D008601 2.5e-119 433.0 351 59.5
CDE10G0241 Ceratophyllum demersum HOM05D006713 ORTHO05D008601 3.2e-119 432.6 327 64.8
AUR62038189 Chenopodium quinoa HOM05D006713 ORTHO05D008601 9.4e-119 431.0 329 62.9
Solyc07g054070.4 Solanum lycopersicum HOM05D006713 ORTHO05D008601 1.2e-118 430.6 344 59.6
Hund01101 Selenicereus undatus HOM05D006713 ORTHO05D008601 1.0e-117 427.6 400 54.2
Cc05_g07100 Coffea canephora HOM05D006713 ORTHO05D008601 4.4e-116 422.2 335 60.6
ATR0665G517 Amborella trichopoda HOM05D006713 ORTHO05D008601 3.5e-113 412.5 328 60.1
Zm00001eb273220 Zea mays HOM05D006713 ORTHO05D008601 2.9e-112 409.5 337 59.1
Haze_13156 Corylus avellana HOM05D006713 ORTHO05D008601 4.2e-111 405.6 372 55.6
HPP92_023829 Vanilla planifolia HOM05D006713 ORTHO05D008601 4.2e-111 405.6 326 58.9
HPP92_023892 Vanilla planifolia HOM05D006713 ORTHO05D008601 2.1e-110 403.3 327 58.7
Lj8A113G48 Lonicera japonica HOM05D006713 ORTHO05D008601 2.6e-108 396.4 352 55.4
Manes.12G089598 Manihot esculenta HOM05D006713 ORTHO05D008601 1.3e-104 384.0 281 65.5
PSO541G1719 Papaver somniferum HOM05D006713 ORTHO05D008601 1.7e-104 383.6 371 54.4
CSS0039998 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 2.9e-104 382.9 285 64.2
Prupe.3G137200 Prunus persica HOM05D006713 ORTHO05D008601 3.8e-104 382.5 378 53.2
PSO675G6747 Papaver somniferum HOM05D006713 ORTHO05D008601 1.1e-103 380.9 368 54.6
Ca_01502_v3 Cicer arietinum L. HOM05D006713 ORTHO05D008601 8.8e-101 371.3 330 57.6
ClCG02G017610 Citrullus lanatus HOM05D006713 ORTHO05D008601 1.2e-100 370.9 508 42.9
Phvul.005G104000 Phaseolus vulgaris HOM05D006713 ORTHO05D008601 5.7e-100 368.6 292 60.3
Nitab4.5_0000512g0100 Nicotiana tabacum HOM05D006713 ORTHO05D008601 9.8e-100 367.9 342 55.8
Nitab4.5_0002169g0110 Nicotiana tabacum HOM05D006713 ORTHO05D008601 4.8e-99 365.5 346 54.9
Thecc.02G179100 Theobroma cacao HOM05D006713 ORTHO05D008601 1.7e-96 357.1 242 67.8
AUR62038063 Chenopodium quinoa HOM05D006713 ORTHO05D008601 8.8e-93 344.7 320 55.3
unitig_62.g23167 Utricularia gibba HOM05D006713 ORTHO05D008601 1.2e-92 344.4 305 56.4
Sopen07g028010 Solanum pennellii HOM05D006713 ORTHO05D008601 2.0e-92 343.6 277 57.4
CiPaw.03G176500 Carya illinoinensis HOM05D006713 ORTHO05D008601 8.3e-91 338.2 252 63.5
AagrBONN_evm.TU.Sc2ySwM_117.1346 Anthoceros agrestis HOM05D006713 ORTHO05D008601 5.6e-87 325.5 312 51.6
Sed0026559 Sechium edule HOM05D006713 ORTHO05D008601 3.4e-84 316.2 232 64.2
Mapoly0088s0019 Marchantia polymorpha HOM05D006713 ORTHO05D008601 2.7e-81 306.6 324 46.0
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 5.0e-80 302.4 405 43.2
Os06g0342750 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 1.4e-77 294.3 235 58.7
MELO3C013617.2 Cucumis melo HOM05D006713 ORTHO05D008601 7.5e-76 288.5 344 47.1
SalBow1G6029 Salvia bowleyana HOM05D006713 ORTHO05D008601 5.6e-71 272.3 179 67.0
Glyma.12G203966 Glycine max HOM05D006713 ORTHO05D008601 1.2e-70 271.2 165 72.7
SMO117G0197 Selaginella moellendorffii HOM05D006713 ORTHO05D008601 4.4e-68 262.7 325 42.8
CBR_g35040 Chara braunii HOM05D006713 ORTHO05D008601 2.3e-61 240.4 355 38.6
SalBow1G1793 Salvia bowleyana HOM05D006713 ORTHO05D008601 2.4e-37 160.6 144 54.2
Glyma.12G204032 Glycine max HOM05D006713 ORTHO05D008601 2.6e-36 157.1 102 76.5
Os06g0343000 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 1.7e-27 127.9 98 63.3
MELO3C001128.2 Cucumis melo HOM05D006713 ORTHO05D008601 2.5e-26 124.0 78 71.8
MELO3C013610.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.9e-18 97.8 75 65.3
SEGI_39135 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 3.0e-16 90.5 97 46.4
Oeu023431.1 Olea europaea HOM05D006713 ORTHO05D008601 9.4e-10 68.9 59 59.3
MELO3C035062.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.0e-08 65.5 39 69.2
MELO3C013612.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.8e-08 64.7 47 53.2
Oeu045818.1 Olea europaea HOM05D006713 ORTHO05D008601 5.7e-07 59.7 50 48.0


User provided reference genes

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