Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G13100 Arabidopsis lyrata HOM05D006115 ORTHO05D007528 1.6e-86 322.8 175 100.0
AT1G03600 Arabidopsis thaliana HOM05D006115 ORTHO05D007528 1.3e-83 313.2 175 96.6
CARHR002940 Cardamine hirsuta HOM05D006115 ORTHO05D007528 6.7e-80 300.8 175 92.0
BcaC05g24519 Brassica carinata HOM05D006115 ORTHO05D007528 5.0e-75 284.6 177 88.7
C05p02030 Brassica napus HOM05D006115 ORTHO05D007528 5.0e-75 284.6 177 88.7
Carub.0001s0272 Capsella rubella HOM05D006115 ORTHO05D007528 8.5e-75 283.9 175 90.3
BolC5t28981H Brassica oleracea HOM05D006115 ORTHO05D007528 7.2e-74 280.8 177 87.0
A10p02120 Brassica napus HOM05D006115 ORTHO05D007528 1.2e-73 280.0 176 86.9
Sp1g02510 Schrenkiella parvula HOM05D006115 ORTHO05D007528 6.1e-73 277.7 175 87.4
BcaB02g06915 Brassica carinata HOM05D006115 ORTHO05D007528 1.8e-72 276.2 178 86.0
Thhalv10008901m.g Eutrema salsugineum HOM05D006115 ORTHO05D007528 1.8e-72 276.2 176 87.5
BolC8t46868H Brassica oleracea HOM05D006115 ORTHO05D007528 3.0e-72 275.4 177 85.3
A08p37300 Brassica napus HOM05D006115 ORTHO05D007528 1.1e-71 273.5 178 86.5
BcaC07g36953 Brassica carinata HOM05D006115 ORTHO05D007528 2.0e-71 272.7 179 85.5
C08p00700 Brassica napus HOM05D006115 ORTHO05D007528 2.0e-71 272.7 179 85.5
BraA08t35627Z Brassica rapa HOM05D006115 ORTHO05D007528 1.1e-69 266.9 179 83.2
BraA10t42481Z Brassica rapa HOM05D006115 ORTHO05D007528 5.5e-66 254.6 177 82.5
Aa31LG1G20930 Aethionema arabicum HOM05D006115 ORTHO05D007528 1.9e-58 229.6 175 76.0
Gohir.A01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.1e-50 203.8 172 66.3
Potri.005G206200 Populus trichocarpa HOM05D006115 ORTHO05D007528 9.4e-50 200.7 167 67.7
Duzib132G1267 Durio zibethinus HOM05D006115 ORTHO05D007528 1.6e-49 199.9 178 66.9
Sabra05G0156800 Salix brachista HOM05D006115 ORTHO05D007528 2.7e-49 199.1 168 67.3
Potri.002G056300 Populus trichocarpa HOM05D006115 ORTHO05D007528 6.1e-49 198.0 172 68.0
ClCG02G001140 Citrullus lanatus HOM05D006115 ORTHO05D007528 3.0e-48 195.7 135 76.3
Rhsim06G0148500 Rhododendron simsii HOM05D006115 ORTHO05D007528 5.2e-48 194.9 166 68.7
THA.LOC104827374 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 6.8e-48 194.5 137 76.6
Gohir.D01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.5e-47 193.4 174 64.9
Gorai.002G017600 Gossypium raimondii HOM05D006115 ORTHO05D007528 2.0e-47 193.0 174 64.9
COL.COLO4_35403 Corchorus olitorius HOM05D006115 ORTHO05D007528 3.4e-47 192.2 166 66.9
Sabra02G0045600 Salix brachista HOM05D006115 ORTHO05D007528 4.4e-47 191.8 180 64.4
Ciclev10016927m.g Citrus clementina HOM05D006115 ORTHO05D007528 5.7e-47 191.4 177 62.1
Sed0009578 Sechium edule HOM05D006115 ORTHO05D007528 5.7e-47 191.4 171 65.5
Atru.chr6.3034 Acer truncatum HOM05D006115 ORTHO05D007528 1.3e-46 190.3 180 63.3
MELO3C018748.2 Cucumis melo HOM05D006115 ORTHO05D007528 1.3e-46 190.3 160 66.2
Sed0024793 Sechium edule HOM05D006115 ORTHO05D007528 1.3e-46 190.3 174 63.2
Peaxi162Scf00132g00062 Petunia axillaris HOM05D006115 ORTHO05D007528 2.8e-46 189.1 176 64.2
PGR142G3842 Punica granatum HOM05D006115 ORTHO05D007528 2.8e-46 189.1 184 58.7
Lj1P733T48 Lonicera japonica HOM05D006115 ORTHO05D007528 4.9e-46 188.3 132 75.8
Lalb_Chr24g0399841 Lupinus albus HOM05D006115 ORTHO05D007528 4.9e-46 188.3 178 60.1
Peaxi162Scf00610g00313 Petunia axillaris HOM05D006115 ORTHO05D007528 4.9e-46 188.3 175 63.4
Eucgr.K00947 Eucalyptus grandis HOM05D006115 ORTHO05D007528 6.3e-46 188.0 178 60.7
Manes.08G098700 Manihot esculenta HOM05D006115 ORTHO05D007528 8.3e-46 187.6 177 65.0
Cfa014568 Carpinus fangiana HOM05D006115 ORTHO05D007528 1.1e-45 187.2 176 61.9
CsaV3_7G004300 Cucumis sativus L. HOM05D006115 ORTHO05D007528 1.4e-45 186.8 160 65.0
Hma1.2p1_0875F.1_g231400 Hydrangea macrophylla HOM05D006115 ORTHO05D007528 1.4e-45 186.8 179 61.5
Psat7g036720 Pisum sativum HOM05D006115 ORTHO05D007528 1.4e-45 186.8 177 61.0
TWI75G0783 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 1.8e-45 186.4 158 65.8
Migut.H01055 Erythranthe guttata HOM05D006115 ORTHO05D007528 3.1e-45 185.7 135 73.3
Sopen07g028230 Solanum pennellii HOM05D006115 ORTHO05D007528 3.1e-45 185.7 172 64.0
Cc05_g06750 Coffea canephora HOM05D006115 ORTHO05D007528 4.1e-45 185.3 173 61.3
MBI02_g19258_MAGBIO Magnolia biondii HOM05D006115 ORTHO05D007528 4.1e-45 185.3 147 69.4
MD09G1090500 Malus domestica HOM05D006115 ORTHO05D007528 4.1e-45 185.3 179 60.9
Lalb_Chr14g0366761 Lupinus albus HOM05D006115 ORTHO05D007528 1.2e-44 183.7 170 62.4
Phvul.005G105900 Phaseolus vulgaris HOM05D006115 ORTHO05D007528 1.2e-44 183.7 177 58.8
Prupe.3G235100 Prunus persica HOM05D006115 ORTHO05D007528 1.2e-44 183.7 177 61.0
CSS0015532 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 1.6e-44 183.3 169 63.9
CSS0031699 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 1.6e-44 183.3 169 63.9
Nitab4.5_0001090g0130 Nicotiana tabacum HOM05D006115 ORTHO05D007528 1.6e-44 183.3 174 63.8
Solyc07g054290.1 Solanum lycopersicum HOM05D006115 ORTHO05D007528 1.6e-44 183.3 184 61.4
HPP92_017628 Vanilla planifolia HOM05D006115 ORTHO05D007528 1.6e-44 183.3 131 71.8
Gohir.A12G137300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 2.0e-44 183.0 176 61.4
Gohir.D12G141300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 2.0e-44 183.0 110 82.7
Gorai.008G152600 Gossypium raimondii HOM05D006115 ORTHO05D007528 2.0e-44 183.0 110 82.7
QL08p037826 Quercus lobata HOM05D006115 ORTHO05D007528 2.0e-44 183.0 134 71.6
MD17G1079700 Malus domestica HOM05D006115 ORTHO05D007528 2.7e-44 182.6 175 60.6
Nitab4.5_0005380g0050 Nicotiana tabacum HOM05D006115 ORTHO05D007528 2.7e-44 182.6 183 60.7
Haze_13113 Corylus avellana HOM05D006115 ORTHO05D007528 3.5e-44 182.2 135 70.4
Lj3g0001000 Lotus japonicus HOM05D006115 ORTHO05D007528 3.5e-44 182.2 178 59.6
PGSC0003DMG400018360 Solanum tuberosum HOM05D006115 ORTHO05D007528 3.5e-44 182.2 176 63.1
VMungo1080G1219 Vigna mungo HOM05D006115 ORTHO05D007528 3.5e-44 182.2 134 70.9
CiPaw.04G123900 Carya illinoinensis HOM05D006115 ORTHO05D007528 5.9e-44 181.4 173 60.1
Lj8P115T48 Lonicera japonica HOM05D006115 ORTHO05D007528 7.7e-44 181.0 115 79.1
CANSAT64G2665 Cannabis sativa HOM05D006115 ORTHO05D007528 1.0e-43 180.6 135 71.1
Medtr2g090200 Medicago truncatula HOM05D006115 ORTHO05D007528 1.0e-43 180.6 178 60.7
Glyma.12G202500 Glycine max HOM05D006115 ORTHO05D007528 1.3e-43 180.3 138 69.6
Nn1g03988 Nelumbo nucifera HOM05D006115 ORTHO05D007528 1.3e-43 180.3 180 59.4
Thecc.02G175700 Theobroma cacao HOM05D006115 ORTHO05D007528 1.3e-43 180.3 110 83.6
Actinidia09875 Actinidia chinensis HOM05D006115 ORTHO05D007528 1.7e-43 179.9 132 72.0
DCAR_019192 Daucus carota HOM05D006115 ORTHO05D007528 2.9e-43 179.1 173 60.7
FAN02G4183 Fragaria x ananassa HOM05D006115 ORTHO05D007528 2.9e-43 179.1 135 71.9
FAN09G2594 Fragaria x ananassa HOM05D006115 ORTHO05D007528 2.9e-43 179.1 135 71.9
HanXRQChr17g0542591 Helianthus annuus HOM05D006115 ORTHO05D007528 2.9e-43 179.1 173 61.8
Duzib248G0317 Durio zibethinus HOM05D006115 ORTHO05D007528 3.8e-43 178.7 111 81.1
FvH4_6g45050 Fragaria vesca HOM05D006115 ORTHO05D007528 3.8e-43 178.7 135 70.4
FAN14G2522 Fragaria x ananassa HOM05D006115 ORTHO05D007528 3.8e-43 178.7 135 70.4
RcHm_v2.0_Chr2g0162381 Rosa chinensis HOM05D006115 ORTHO05D007528 5.0e-43 178.3 135 71.9
SGA_v2.0_scaffold356G49787 Striga asiatica HOM05D006115 ORTHO05D007528 6.6e-43 177.9 172 59.9
TWI18G1016 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 6.6e-43 177.9 136 69.1
THA.LOC104801178 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 8.6e-43 177.6 115 80.9
unitig_26.g9943 Utricularia gibba HOM05D006115 ORTHO05D007528 8.6e-43 177.6 174 59.8
AUR62041946 Chenopodium quinoa HOM05D006115 ORTHO05D007528 1.1e-42 177.2 171 59.1
Glyma.13G299200 Glycine max HOM05D006115 ORTHO05D007528 1.5e-42 176.8 112 79.5
Aqoxy4G01223 Aquilegia oxysepala HOM05D006115 ORTHO05D007528 1.9e-42 176.4 137 67.9
TPR.G35547 Trifolium pratense HOM05D006115 ORTHO05D007528 1.9e-42 176.4 130 70.8
GSVIVG01030552001 Vitis vinifera HOM05D006115 ORTHO05D007528 2.5e-42 176.0 174 59.8
Ah.08g220260 Amaranthus hybridus HOM05D006115 ORTHO05D007528 3.3e-42 175.6 181 56.9
MSTRG.14200 Avicennia marina HOM05D006115 ORTHO05D007528 4.2e-42 175.3 173 59.0
MSTRG.12305 Avicennia marina HOM05D006115 ORTHO05D007528 5.6e-42 174.9 175 59.4
FAN05G1351 Fragaria x ananassa HOM05D006115 ORTHO05D007528 5.6e-42 174.9 132 71.2
Oeu040003.1 Olea europaea HOM05D006115 ORTHO05D007528 7.2e-42 174.5 170 58.8
PSO832G3416 Papaver somniferum HOM05D006115 ORTHO05D007528 2.1e-41 172.9 179 55.9
PSO210G0967 Papaver somniferum HOM05D006115 ORTHO05D007528 2.8e-41 172.6 179 55.9
AUR62028441 Chenopodium quinoa HOM05D006115 ORTHO05D007528 3.6e-41 172.2 171 60.2
CDE05G3372 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 4.7e-41 171.8 167 59.3
Lsat_1_v5_gn_3_39480 Lactuca sativa HOM05D006115 ORTHO05D007528 8.0e-41 171.0 171 58.5
Zm00001eb395230 Zea mays HOM05D006115 ORTHO05D007528 1.4e-40 170.2 135 69.6
unitig_749.g13954 Utricularia gibba HOM05D006115 ORTHO05D007528 3.0e-40 169.1 168 59.5
Zm00001eb015950 Zea mays HOM05D006115 ORTHO05D007528 3.0e-40 169.1 161 60.9
Oeu029929.1 Olea europaea HOM05D006115 ORTHO05D007528 4.0e-40 168.7 135 66.7
Os03g0333400 Oryza sativa ssp. japonica HOM05D006115 ORTHO05D007528 1.2e-39 167.2 146 62.3
Sc12g0002830 Simmondsia chinensis HOM05D006115 ORTHO05D007528 1.5e-39 166.8 103 80.6
Dinv03833 Davidia involucrata HOM05D006115 ORTHO05D007528 4.4e-39 165.2 168 57.1
ECA246G1074 Erigeron canadensis HOM05D006115 ORTHO05D007528 4.4e-39 165.2 107 76.6
Duzib052G1052 Durio zibethinus HOM05D006115 ORTHO05D007528 8.3e-38 161.0 149 60.4
SEGI_04908 Sequoiadendron giganteum HOM05D006115 ORTHO05D007528 6.6e-35 151.4 110 69.1
SMO364G0930 Selaginella moellendorffii HOM05D006115 ORTHO05D007528 1.0e-32 144.1 129 58.1
Ca_01513_v3 Cicer arietinum L. HOM05D006115 ORTHO05D007528 1.4e-32 143.7 85 82.4
Pp3c9_26020 Physcomitrium patens HOM05D006115 ORTHO05D007528 1.7e-30 136.7 110 63.6
Mapoly0049s0056 Marchantia polymorpha HOM05D006115 ORTHO05D007528 4.9e-30 135.2 123 56.9
Actinidia11067 Actinidia chinensis HOM05D006115 ORTHO05D007528 1.9e-29 133.3 141 58.9
AagrBONN_evm.TU.Sc2ySwM_228.954 Anthoceros agrestis HOM05D006115 ORTHO05D007528 1.9e-29 133.3 129 54.3
CBR_g50764 Chara braunii HOM05D006115 ORTHO05D007528 5.0e-27 125.2 181 46.4
CDE05G0569 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 2.8e-25 119.4 124 51.6
MCO14G469 Micromonas commoda HOM05D006115 ORTHO05D007528 6.4e-22 108.2 146 42.5
Cre05.g243800 Chlamydomonas reinhardtii HOM05D006115 ORTHO05D007528 6.0e-20 101.7 175 38.9
ATR0693G305 Amborella trichopoda HOM05D006115 ORTHO05D007528 1.2e-17 94.0 146 46.6
TAR627G0228 Trochodendron aralioides HOM05D006115 ORTHO05D007528 1.6e-17 93.6 88 59.1
Dinv23684 Davidia involucrata HOM05D006115 ORTHO05D007528 2.0e-15 86.7 97 53.6


User provided reference genes

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