Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G12070 Arabidopsis lyrata HOM05D007766 ORTHO05D009733 8.6e-137 490.3 251 100.0
AT1G02700 Arabidopsis thaliana HOM05D007766 ORTHO05D009733 3.5e-130 468.4 250 96.8
CARHR002000 Cardamine hirsuta HOM05D007766 ORTHO05D009733 2.7e-122 442.2 249 90.8
Carub.0001s0178 Capsella rubella HOM05D007766 ORTHO05D009733 1.1e-120 436.8 251 89.6
BraA10t42417Z Brassica rapa HOM05D000768 ORTHO05D000665 1.7e-105 386.3 251 81.7
BolC5t28921H Brassica oleracea HOM05D000768 ORTHO05D000665 3.0e-105 385.6 249 81.9
Thhalv10008633m.g Eutrema salsugineum HOM05D007766 ORTHO05D009733 1.1e-104 383.6 250 80.8
C05p01390 Brassica napus HOM05D000768 ORTHO05D000665 4.3e-104 381.7 249 81.1
Sp1g01680 Schrenkiella parvula HOM05D007766 ORTHO05D009733 6.6e-97 357.8 250 76.8
Aa31LG1G9860 Aethionema arabicum HOM05D007766 ORTHO05D009733 2.8e-95 352.4 255 77.3
A10p01420 Brassica napus HOM05D000768 ORTHO05D000665 1.5e-85 320.1 217 79.7
COL.COLO4_23278 Corchorus olitorius HOM05D007766 ORTHO05D009733 7.7e-53 211.5 228 53.1
CiPaw.07G114200 Carya illinoinensis HOM05D007766 ORTHO05D009733 2.1e-50 203.4 225 51.6
Eucgr.H01072 Eucalyptus grandis HOM05D007766 ORTHO05D009733 3.6e-50 202.6 259 47.9
Thecc.01G308600 Theobroma cacao HOM05D007766 ORTHO05D009733 1.4e-49 200.7 255 47.8
Haze_04998 Corylus avellana HOM05D007766 ORTHO05D009733 2.3e-49 199.9 256 50.0
PGR119G1997 Punica granatum HOM05D007766 ORTHO05D009733 3.9e-49 199.1 233 48.1
TWI36G1235 Tripterygium wilfordii HOM05D007766 ORTHO05D009733 2.6e-48 196.4 235 52.8
Cpa.g.sc151.50 Carica papaya HOM05D007766 ORTHO05D009733 7.4e-48 194.9 252 49.6
Gohir.D12G131000 Gossypium hirsutum HOM05D007766 ORTHO05D009733 3.7e-47 192.6 256 47.3
RcHm_v2.0_Chr7g0241981 Rosa chinensis HOM05D007766 ORTHO05D009733 3.7e-47 192.6 257 49.4
Gorai.008G142300 Gossypium raimondii HOM05D007766 ORTHO05D009733 1.4e-46 190.7 256 47.3
Duzib138G0131 Durio zibethinus HOM05D007766 ORTHO05D009733 7.0e-46 188.3 230 48.7
FAN18G0466 Fragaria x ananassa HOM05D007766 ORTHO05D009733 9.1e-46 188.0 224 51.3
FAN18G1064 Fragaria x ananassa HOM05D007766 ORTHO05D009733 9.1e-46 188.0 224 51.3
Potri.014G124500 Populus trichocarpa HOM05D007766 ORTHO05D009733 9.1e-46 188.0 257 47.5
ClCG09G005330 Citrullus lanatus HOM05D007766 ORTHO05D009733 2.6e-45 186.4 249 47.8
QL12p028831 Quercus lobata HOM05D007766 ORTHO05D009733 3.5e-45 186.0 290 44.1
Gohir.A12G127500 Gossypium hirsutum HOM05D007766 ORTHO05D009733 7.7e-45 184.9 257 46.3
Sabra14G0092600 Salix brachista HOM05D007766 ORTHO05D009733 2.9e-44 183.0 256 46.9
Cfa005851 Carpinus fangiana HOM05D007766 ORTHO05D009733 5.0e-44 182.2 257 47.1
FvH4_5g39680 Fragaria vesca HOM05D007766 ORTHO05D009733 6.5e-44 181.8 260 48.1
Dinv33093 Davidia involucrata HOM05D007766 ORTHO05D009733 8.5e-44 181.4 264 48.5
GSVIVG01028075001 Vitis vinifera HOM05D007766 ORTHO05D009733 1.1e-43 181.0 256 48.4
FAN08G1563 Fragaria x ananassa HOM05D007766 ORTHO05D009733 3.2e-43 179.5 260 48.1
Manes.05G001200 Manihot esculenta HOM05D007766 ORTHO05D009733 3.6e-42 176.0 232 45.3
Phvul.001G211300 Phaseolus vulgaris HOM05D007766 ORTHO05D009733 8.0e-42 174.9 252 46.0
VMungo1383G0118 Vigna mungo HOM05D007766 ORTHO05D009733 1.0e-41 174.5 252 45.6
Nitab4.5_0000803g0050 Nicotiana tabacum HOM05D007766 ORTHO05D009733 1.4e-41 174.1 232 47.4
Nitab4.5_0000116g0120 Nicotiana tabacum HOM05D007766 ORTHO05D009733 1.8e-41 173.7 261 46.4
Peaxi162Scf00001g00292 Petunia axillaris HOM05D007766 ORTHO05D009733 2.3e-41 173.3 232 45.7
Ciclev10024028m.g Citrus clementina HOM05D007766 ORTHO05D009733 2.0e-40 170.2 151 60.3
Lj1C21T2 Lonicera japonica HOM05D007766 ORTHO05D009733 4.4e-40 169.1 249 44.2
MELO3C015946.2 Cucumis melo HOM05D007766 ORTHO05D009733 9.7e-40 167.9 262 44.7
CsaV3_7G029750 Cucumis sativus L. HOM05D007766 ORTHO05D009733 1.7e-39 167.2 223 46.6
PGSC0003DMG400031827 Solanum tuberosum HOM05D007766 ORTHO05D009733 2.8e-39 166.4 253 44.3
arahy.Tifrunner.gnm1.ann1.MEA9U7 Arachis hypogaea HOM05D007766 ORTHO05D009733 4.8e-39 165.6 249 46.2
CANSAT25G3789 Cannabis sativa HOM05D007766 ORTHO05D009733 4.8e-39 165.6 255 48.2
Migut.D00109 Erythranthe guttata HOM05D007766 ORTHO05D009733 6.3e-39 165.2 259 44.0
Atru.chr5.1065 Acer truncatum HOM05D007766 ORTHO05D009733 8.2e-39 164.9 264 41.7
Cc01_g21240 Coffea canephora HOM05D007766 ORTHO05D009733 1.8e-38 163.7 261 44.8
Glyma.19G214500 Glycine max HOM05D007766 ORTHO05D009733 5.3e-38 162.2 254 44.5
Medtr7g109280 Medicago truncatula HOM05D007766 ORTHO05D009733 5.3e-38 162.2 246 44.3
Lj1g0002879 Lotus japonicus HOM05D007766 ORTHO05D009733 7.0e-38 161.8 259 43.2
Actinidia27601 Actinidia chinensis HOM05D007766 ORTHO05D009733 9.1e-38 161.4 248 44.0
Prupe.8G268800 Prunus persica HOM05D007766 ORTHO05D009733 1.2e-37 161.0 284 40.8
arahy.Tifrunner.gnm1.ann1.28FBJ8 Arachis hypogaea HOM05D007766 ORTHO05D009733 2.7e-37 159.8 253 45.1
Ca_09199_v3 Cicer arietinum L. HOM05D007766 ORTHO05D009733 2.7e-37 159.8 253 43.5
TPR.G20299 Trifolium pratense HOM05D007766 ORTHO05D009733 1.0e-36 157.9 243 42.0
MD03G1298400 Malus domestica HOM05D007766 ORTHO05D009733 3.8e-36 156.0 291 43.6
Rhsim13G0007300 Rhododendron simsii HOM05D007766 ORTHO05D009733 1.1e-35 154.5 183 51.9
ECA248G3735 Erigeron canadensis HOM05D007766 ORTHO05D009733 3.2e-35 152.9 212 46.2
Lalb_Chr15g0078421 Lupinus albus HOM05D007766 ORTHO05D009733 4.2e-35 152.5 240 42.9
Sopen09g030400 Solanum pennellii HOM05D007766 ORTHO05D009733 9.4e-35 151.4 253 42.7
Psat3g020680 Pisum sativum HOM05D007766 ORTHO05D009733 2.1e-34 150.2 228 43.9
Sed0007654 Sechium edule HOM05D007766 ORTHO05D009733 2.7e-34 149.8 248 43.5
Lsat_1_v5_gn_5_190141 Lactuca sativa HOM05D007766 ORTHO05D009733 1.2e-32 144.4 229 41.0
vmacro02422 Vaccinium macrocarpon HOM05D007766 ORTHO05D009733 5.7e-32 142.1 254 41.7
Ah.15g092870 Amaranthus hybridus HOM05D007766 ORTHO05D009733 9.8e-32 141.4 206 45.1
SGA_v2.0_scaffold334G49048 Striga asiatica HOM05D007766 ORTHO05D009733 9.8e-32 141.4 259 42.5
CSS0041323 Camellia sinensis var. sinensis HOM05D007766 ORTHO05D009733 1.3e-31 141.0 248 40.7
Nn3g21607 Nelumbo nucifera HOM05D007766 ORTHO05D009733 1.1e-30 137.9 260 40.4
HanXRQChr01g0000891 Helianthus annuus HOM05D007766 ORTHO05D009733 1.4e-30 137.5 172 46.5
EL10Ac7g17611 Beta vulgaris HOM05D007766 ORTHO05D009733 2.2e-28 130.2 265 37.0
BcaB01g02076 Brassica carinata HOM05D012784 ORTHO05D014349 1.1e-27 127.9 118 61.0
THA.LOC104801295 Tarenaya hassleriana HOM05D012784 ORTHO05D014349 4.2e-27 125.9 126 61.9
DCAR_002867 Daucus carota HOM05D007766 ORTHO05D009733 7.2e-27 125.2 260 40.4
BcaC04g24040 Brassica carinata HOM05D012784 ORTHO05D014349 1.6e-26 124.0 117 59.8
C09p01690 Brassica napus HOM05D012784 ORTHO05D014349 1.6e-26 124.0 117 59.8
BolC9t53103H Brassica oleracea HOM05D012784 ORTHO05D014349 1.6e-26 124.0 117 59.8
A09p01590 Brassica napus HOM05D012784 ORTHO05D014349 2.1e-26 123.6 117 59.0
BraA09t35817Z Brassica rapa HOM05D012784 ORTHO05D014349 2.1e-26 123.6 117 59.0
Sp6g02040 Schrenkiella parvula HOM05D012784 ORTHO05D014349 2.1e-26 123.6 117 59.8
Aqoxy2G02831 Aquilegia oxysepala HOM05D007766 ORTHO05D009733 3.6e-26 122.9 247 36.8
Thhalv10029260m.g Eutrema salsugineum HOM05D012784 ORTHO05D014349 3.6e-26 122.9 110 60.9
Sc17g0002970 Simmondsia chinensis HOM05D007766 ORTHO05D009733 1.2e-24 117.9 261 38.7
unitig_60.g25659 Utricularia gibba HOM05D001839 ORTHO05D001867 1.2e-24 117.9 134 50.0
AL6G51030 Arabidopsis lyrata HOM05D012784 ORTHO05D014349 2.6e-24 116.7 109 58.7
AT4G02140 Arabidopsis thaliana HOM05D012784 ORTHO05D014349 9.8e-24 114.8 109 57.8
PSO478G3523 Papaver somniferum HOM05D007766 ORTHO05D009733 1.7e-23 114.0 278 36.7
Carub.0006s3503 Capsella rubella HOM05D012784 ORTHO05D014349 1.8e-22 110.5 109 56.0
PSO782G1382 Papaver somniferum HOM05D007766 ORTHO05D009733 2.4e-22 110.2 275 37.1
MBI18_g25084_MAGBIO Magnolia biondii HOM05D007766 ORTHO05D009733 4.1e-22 109.4 267 38.6
TAR636G1646 Trochodendron aralioides HOM05D007766 ORTHO05D009733 5.4e-22 109.0 131 45.8
Aa31LG5G1830 Aethionema arabicum HOM05D000768 ORTHO05D014349 2.0e-21 107.1 104 56.7
CDE05G0244 Ceratophyllum demersum HOM05D007766 ORTHO05D009733 7.5e-16 88.6 140 40.7
Zm00001eb330520 Zea mays HOM05D007766 ORTHO05D009733 1.7e-15 87.4 235 35.3
Medtr8g023290 Medicago truncatula HOM05D007766 ORTHO05D009733 3.9e-12 76.3 101 47.5
Solyc09g075600.3 Solanum lycopersicum HOM05D007766 ORTHO05D009733 5.0e-12 75.9 78 53.8
AUR62008743 Chenopodium quinoa HOM05D007766 ORTHO05D009733 5.6e-11 72.4 118 39.0
Actinidia21421 Actinidia chinensis HOM05D007766 ORTHO05D009733 8.9e-09 65.1 81 49.4
Os07g0675200 Oryza sativa ssp. japonica HOM05D007766 ORTHO05D009733 2.6e-08 63.5 228 33.8
Sc17g0002980 Simmondsia chinensis HOM05D007766 ORTHO05D009733 7.0e-06 55.5 43 69.8


User provided reference genes

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