Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G11360 Arabidopsis lyrata HOM05D007943 ORTHO05D010047 2.9e-46 188.3 104 100.0
BolC8t52866H Brassica oleracea HOM05D007943 ORTHO05D010047 3.5e-28 128.3 108 65.7
Carub.0001s0107 Capsella rubella HOM05D007943 ORTHO05D010047 7.9e-28 127.1 103 66.0
A09p68930 Brassica napus HOM05D007943 ORTHO05D010047 8.7e-27 123.6 106 67.0
Glyma.16G020300 Glycine max HOM05D007943 ORTHO05D010047 2.1e-12 75.9 62 54.8
Phvul.010G118200 Phaseolus vulgaris HOM05D007943 ORTHO05D010047 4.6e-12 74.7 66 54.5
Glyma.03G260100 Glycine max HOM05D007943 ORTHO05D010047 6.1e-12 74.3 63 50.8
Lalb_Chr10g0100821 Lupinus albus HOM05D007943 ORTHO05D010047 7.9e-12 73.9 66 51.5
Manes.05G017800 Manihot esculenta HOM05D007943 ORTHO05D010047 2.3e-11 72.4 58 55.2
CiPaw.01G081100 Carya illinoinensis HOM05D007943 ORTHO05D010047 3.0e-11 72.0 57 52.6
Glyma.07G051200 Glycine max HOM05D007943 ORTHO05D010047 3.9e-11 71.6 61 52.5
Phvul.006G116500 Phaseolus vulgaris HOM05D007943 ORTHO05D010047 6.7e-11 70.9 56 51.8
Potri.014G104100 Populus trichocarpa HOM05D007943 ORTHO05D010047 8.8e-11 70.5 65 44.6
QL08p046777 Quercus lobata HOM05D007943 ORTHO05D010047 8.8e-11 70.5 66 48.5
Ciclev10022962m.g Citrus clementina HOM05D007943 ORTHO05D010047 1.1e-10 70.1 64 48.4
Prupe.2G195800 Prunus persica HOM05D007943 ORTHO05D010047 2.5e-10 68.9 54 51.9
Atru.chr5.749 Acer truncatum HOM05D007943 ORTHO05D010047 3.3e-10 68.6 65 44.6
Glyma.19G259000 Glycine max HOM05D007943 ORTHO05D010047 3.3e-10 68.6 63 42.9
Psat4g217240 Pisum sativum HOM05D007943 ORTHO05D010047 3.3e-10 68.6 56 51.8
Duzib133G1419 Durio zibethinus HOM05D007943 ORTHO05D010047 5.7e-10 67.8 80 41.2
MD01G1087200 Malus domestica HOM05D007943 ORTHO05D010047 5.7e-10 67.8 54 50.0
GSVIVG01027420001 Vitis vinifera HOM05D007943 ORTHO05D010047 5.7e-10 67.8 65 43.1
Lj3g0013373 Lotus japonicus HOM05D007943 ORTHO05D010047 7.4e-10 67.4 56 51.8
MD07G1157400 Malus domestica HOM05D007943 ORTHO05D010047 1.3e-09 66.6 54 51.9
arahy.Tifrunner.gnm1.ann1.FJCJ23 Arachis hypogaea HOM05D007943 ORTHO05D010047 1.7e-09 66.2 73 42.5
Gohir.D11G104700 Gossypium hirsutum HOM05D007943 ORTHO05D010047 1.7e-09 66.2 63 46.0
Gorai.007G112000 Gossypium raimondii HOM05D007943 ORTHO05D010047 1.7e-09 66.2 63 46.0
Thecc.01G335100 Theobroma cacao HOM05D007943 ORTHO05D010047 1.7e-09 66.2 54 50.0
Lalb_Chr02g0157681 Lupinus albus HOM05D007943 ORTHO05D010047 2.2e-09 65.9 58 53.4
TPR.G25267 Trifolium pratense HOM05D007943 ORTHO05D010047 2.2e-09 65.9 77 44.2
Haze_15717 Corylus avellana HOM05D007943 ORTHO05D010047 2.8e-09 65.5 65 46.2
Gohir.A11G100000 Gossypium hirsutum HOM05D007943 ORTHO05D010047 2.8e-09 65.5 56 50.0
Medtr8g024630 Medicago truncatula HOM05D007943 ORTHO05D010047 3.7e-09 65.1 76 44.7
Cfa003750 Carpinus fangiana HOM05D007943 ORTHO05D010047 6.3e-09 64.3 53 50.9
FAN03G2903 Fragaria x ananassa HOM05D007943 ORTHO05D010047 6.3e-09 64.3 53 49.1
TAR629G3284 Trochodendron aralioides HOM05D007943 ORTHO05D010047 6.3e-09 64.3 67 44.8
Oeu042966.1 Olea europaea HOM05D007943 ORTHO05D010047 1.1e-08 63.5 58 51.7
CSS0046577 Camellia sinensis var. sinensis HOM05D007943 ORTHO05D010047 1.4e-08 63.2 54 51.9
RcHm_v2.0_Chr1g0360861 Rosa chinensis HOM05D007943 ORTHO05D010047 1.4e-08 63.2 53 49.1
COL.COLO4_06217 Corchorus olitorius HOM05D007943 ORTHO05D010047 1.8e-08 62.8 81 40.7
TPR.G4732 Trifolium pratense HOM05D007943 ORTHO05D010047 1.8e-08 62.8 83 39.8
FvH4_7g17420 Fragaria vesca HOM05D007943 ORTHO05D010047 2.4e-08 62.4 53 47.2
FAN01G2944 Fragaria x ananassa HOM05D007943 ORTHO05D010047 2.4e-08 62.4 53 47.2
FAN06G1823 Fragaria x ananassa HOM05D007943 ORTHO05D010047 2.4e-08 62.4 53 47.2
FAN10G0207 Fragaria x ananassa HOM05D007943 ORTHO05D010047 2.4e-08 62.4 53 47.2
FAN10G1708 Fragaria x ananassa HOM05D007943 ORTHO05D010047 3.1e-08 62.0 53 47.2
Gohir.D07G139100 Gossypium hirsutum HOM05D007943 ORTHO05D010047 3.1e-08 62.0 79 35.4
Gorai.001G151200 Gossypium raimondii HOM05D007943 ORTHO05D010047 3.1e-08 62.0 79 35.4
Manes.01G241300 Manihot esculenta HOM05D007943 ORTHO05D010047 9.1e-08 60.5 63 39.7
Gohir.A07G134500 Gossypium hirsutum HOM05D007943 ORTHO05D010047 1.5e-07 59.7 79 34.2
Potri.002G177700 Populus trichocarpa HOM05D007943 ORTHO05D010047 1.5e-07 59.7 65 43.1
Sabra02G0135900 Salix brachista HOM05D007943 ORTHO05D010047 2.6e-07 58.9 83 37.3
Hund16743 Selenicereus undatus HOM05D007943 ORTHO05D010047 3.4e-07 58.5 52 51.9
AUR62004549 Chenopodium quinoa HOM05D007943 ORTHO05D010047 4.5e-07 58.2 66 40.9
MELO3C005988.2 Cucumis melo HOM05D007943 ORTHO05D010047 4.5e-07 58.2 81 38.3
CsaV3_3G007690 Cucumis sativus L. HOM05D007943 ORTHO05D010047 4.5e-07 58.2 81 38.3
DCAR_006654 Daucus carota HOM05D007943 ORTHO05D010047 7.7e-07 57.4 53 47.2
Rhsim01G0178600 Rhododendron simsii HOM05D007943 ORTHO05D010047 1.3e-06 56.6 54 46.3
Nn3g18838 Nelumbo nucifera HOM05D007943 ORTHO05D010047 5.0e-06 54.7 65 35.4
CSS0001750 Camellia sinensis var. sinensis HOM05D007943 ORTHO05D010047 8.5e-06 53.9 55 45.5


User provided reference genes

Program Settings