Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G10390 Arabidopsis lyrata HOM05D006822 ORTHO05D008884 3.8e-281 971.1 580 100.0
AT1G01930 Arabidopsis thaliana HOM05D006822 ORTHO05D008884 2.0e-253 879.0 507 92.9
Carub.0001s0031 Capsella rubella HOM05D006822 ORTHO05D008884 1.5e-229 799.7 505 86.7
Sp1g00370 Schrenkiella parvula HOM05D006822 ORTHO05D008884 7.6e-221 770.8 504 82.3
Thhalv10007219m.g Eutrema salsugineum HOM05D006822 ORTHO05D008884 3.1e-214 748.8 505 80.8
Aa31LG1G11250 Aethionema arabicum HOM05D006822 ORTHO05D008884 1.7e-212 743.0 548 73.7
C08p53940 Brassica napus HOM05D006822 ORTHO05D008884 9.3e-203 710.7 503 78.7
BolC8t52907H Brassica oleracea HOM05D006822 ORTHO05D008884 9.3e-203 710.7 503 78.7
BraA09t42269Z Brassica rapa HOM05D006822 ORTHO05D008884 3.7e-199 698.7 487 80.3
THA.LOC104817014 Tarenaya hassleriana HOM05D006822 ORTHO05D008884 8.2e-183 644.4 509 67.8
Cpa.g.sc18.138 Carica papaya HOM05D006822 ORTHO05D008884 1.2e-149 534.3 515 57.1
Gohir.A08G031700 Gossypium hirsutum HOM05D006822 ORTHO05D008884 2.9e-148 529.6 521 56.4
Gorai.004G041400 Gossypium raimondii HOM05D006822 ORTHO05D008884 1.9e-147 526.9 520 55.8
Gohir.D08G042800 Gossypium hirsutum HOM05D006822 ORTHO05D008884 4.2e-147 525.8 503 57.3
Duzib133G0703 Durio zibethinus HOM05D006822 ORTHO05D008884 2.0e-144 516.9 512 55.9
Thecc.01G374100 Theobroma cacao HOM05D006822 ORTHO05D008884 7.5e-144 515.0 513 55.0
Cfa001701 Carpinus fangiana HOM05D006822 ORTHO05D008884 1.4e-142 510.8 521 55.9
Ciclev10019178m.g Citrus clementina HOM05D006822 ORTHO05D008884 1.4e-142 510.8 501 55.9
Manes.01G264800 Manihot esculenta HOM05D006822 ORTHO05D008884 1.8e-142 510.4 507 54.4
Dinv32391 Davidia involucrata HOM05D004001 ORTHO05D004559 1.2e-141 507.7 509 54.8
QL08p051944 Quercus lobata HOM05D006822 ORTHO05D008884 4.5e-141 505.8 522 54.2
GSVIVG01027532001 Vitis vinifera HOM05D006822 ORTHO05D008884 4.5e-141 505.8 519 54.5
Atru.chr5.328 Acer truncatum HOM05D006822 ORTHO05D008884 1.3e-140 504.2 519 54.7
Haze_16833 Corylus avellana HOM05D006822 ORTHO05D008884 7.3e-139 498.4 523 54.3
PGR031G1001 Punica granatum HOM05D006822 ORTHO05D008884 4.7e-138 495.7 517 54.4
CiPaw.01G260400 Carya illinoinensis HOM05D006822 ORTHO05D008884 6.1e-138 495.4 524 53.1
COL.COLO4_12575 Corchorus olitorius HOM05D006822 ORTHO05D008884 2.3e-137 493.4 511 55.8
TWI14G1233 Tripterygium wilfordii HOM05D006822 ORTHO05D008884 4.0e-137 492.7 512 55.9
Potri.002G149800 Populus trichocarpa HOM05D006822 ORTHO05D008884 6.8e-137 491.9 522 53.6
TAR375G1023 Trochodendron aralioides HOM05D006822 ORTHO05D008884 6.8e-137 491.9 534 52.6
CSS0016394 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 8.9e-137 491.5 502 56.2
Glyma.09G267800 Glycine max HOM05D006822 ORTHO05D008884 8.9e-137 491.5 524 52.1
SGA_v2.0_scaffold95G28889 Striga asiatica HOM05D006822 ORTHO05D008884 1.5e-136 490.7 507 54.6
Eucgr.D02443 Eucalyptus grandis HOM05D006822 ORTHO05D008884 9.8e-136 488.0 520 53.5
CANSAT56G1004 Cannabis sativa HOM05D006822 ORTHO05D008884 2.2e-135 486.9 513 52.6
Prupe.2G147600 Prunus persica HOM05D006822 ORTHO05D008884 1.1e-134 484.6 523 54.1
Oeu003493.1 Olea europaea HOM05D006822 ORTHO05D008884 1.9e-134 483.8 528 51.7
AUR62004233 Chenopodium quinoa HOM05D006822 ORTHO05D008884 3.2e-134 483.0 520 53.1
vmacro13383 Vaccinium macrocarpon HOM05D006822 ORTHO05D008884 3.2e-134 483.0 514 54.9
Sabra02G0118500 Salix brachista HOM05D006822 ORTHO05D008884 1.2e-133 481.1 512 53.7
Glyma.18G222100 Glycine max HOM05D006822 ORTHO05D008884 2.0e-133 480.3 526 52.1
Lj7A526T89 Lonicera japonica HOM05D006822 ORTHO05D008884 2.0e-133 480.3 504 54.2
Hma1.2p1_0053F.1_g030830 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 2.7e-133 479.9 507 52.7
Migut.B01651 Erythranthe guttata HOM05D006822 ORTHO05D008884 3.5e-133 479.6 510 53.1
AUR62013615 Chenopodium quinoa HOM05D006822 ORTHO05D008884 7.8e-133 478.4 528 51.1
Rhsim07G0025500 Rhododendron simsii HOM05D006822 ORTHO05D008884 1.0e-132 478.0 511 54.0
VMungo1383G2566 Vigna mungo HOM05D006822 ORTHO05D008884 3.0e-132 476.5 523 51.4
Ah.05g175170 Amaranthus hybridus HOM05D006822 ORTHO05D008884 6.6e-132 475.3 542 50.7
MELO3C006175.2 Cucumis melo HOM05D006822 ORTHO05D008884 2.5e-131 473.4 513 51.1
ClCG05G002100 Citrullus lanatus HOM05D006822 ORTHO05D008884 3.3e-131 473.0 507 51.3
Hma1.2p1_0053F.1_g030820 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 5.6e-131 472.2 522 51.0
arahy.Tifrunner.gnm1.ann1.K16L32 Arachis hypogaea HOM05D006822 ORTHO05D008884 9.5e-131 471.5 521 52.4
HanXRQChr04g0122211 Helianthus annuus HOM05D006822 ORTHO05D008884 9.5e-131 471.5 515 51.8
Aqoxy7G00564 Aquilegia oxysepala HOM05D006822 ORTHO05D008884 2.1e-130 470.3 509 51.9
Hund27354 Selenicereus undatus HOM05D006822 ORTHO05D008884 2.1e-130 470.3 529 52.4
PGSC0003DMG401012750 Solanum tuberosum HOM05D006822 ORTHO05D008884 2.1e-130 470.3 529 49.5
CsaV3_3G009540 Cucumis sativus L. HOM05D006822 ORTHO05D008884 3.6e-130 469.5 516 51.4
Sopen01g037280 Solanum pennellii HOM05D006822 ORTHO05D008884 3.6e-130 469.5 525 51.4
arahy.Tifrunner.gnm1.ann1.485MU0 Arachis hypogaea HOM05D006822 ORTHO05D008884 1.1e-129 468.0 521 52.2
MD02G1201200 Malus domestica HOM05D006822 ORTHO05D008884 1.1e-129 468.0 522 51.1
Peaxi162Scf00021g01312 Petunia axillaris HOM05D006822 ORTHO05D008884 1.4e-129 467.6 515 51.1
Lj1g0013249 Lotus japonicus HOM05D006822 ORTHO05D008884 3.1e-129 466.5 517 49.9
Nitab4.5_0004320g0040 Nicotiana tabacum HOM05D006822 ORTHO05D008884 3.1e-129 466.5 545 48.8
CAN.G170.5 Capsicum annuum HOM05D006822 ORTHO05D008884 4.0e-129 466.1 521 49.7
Cc02_g36520 Coffea canephora HOM05D006822 ORTHO05D008884 4.0e-129 466.1 517 50.5
Solyc01g091510.4 Solanum lycopersicum HOM05D006822 ORTHO05D008884 2.6e-128 463.4 531 50.1
Sed0020963 Sechium edule HOM05D006822 ORTHO05D008884 4.4e-128 462.6 509 51.5
PSO478G2587 Papaver somniferum HOM05D006822 ORTHO05D008884 7.5e-128 461.8 531 51.2
CARHR000420 Cardamine hirsuta HOM05D006822 ORTHO05D008884 9.8e-128 461.5 302 81.5
Sc23g0003500 Simmondsia chinensis HOM05D006822 ORTHO05D008884 3.7e-127 459.5 535 50.5
Nitab4.5_0013912g0010 Nicotiana tabacum HOM05D006822 ORTHO05D008884 6.4e-127 458.8 554 47.8
Phvul.008G075100 Phaseolus vulgaris HOM05D006822 ORTHO05D008884 3.2e-126 456.4 521 49.9
FAN01G0942 Fragaria x ananassa HOM05D006822 ORTHO05D008884 5.4e-126 455.7 518 53.3
Lsat_1_v5_gn_7_7481 Lactuca sativa HOM05D006822 ORTHO05D008884 5.4e-126 455.7 503 51.5
FvH4_7g12110 Fragaria vesca HOM05D006822 ORTHO05D008884 2.1e-125 453.8 516 52.5
RcHm_v2.0_Chr1g0350861 Rosa chinensis HOM05D006822 ORTHO05D008884 2.7e-125 453.4 518 50.8
FAN06G2864 Fragaria x ananassa HOM05D006822 ORTHO05D008884 3.5e-125 453.0 514 52.1
EL10Ac1g00937 Beta vulgaris HOM05D006822 ORTHO05D008884 6.0e-125 452.2 518 50.4
Medtr7g075170 Medicago truncatula HOM05D006822 ORTHO05D008884 7.3e-123 445.3 515 50.3
Os04g0574600 Oryza sativa ssp. japonica HOM05D006822 ORTHO05D008884 4.7e-122 442.6 499 49.7
Ca_07832_v3 Cicer arietinum L. HOM05D006822 ORTHO05D008884 8.1e-122 441.8 506 49.4
Psat3g115280 Pisum sativum HOM05D006822 ORTHO05D008884 1.5e-120 437.6 510 48.8
Lalb_Chr01g0021331 Lupinus albus HOM05D006822 ORTHO05D008884 2.6e-120 436.8 515 49.5
TPR.G26925 Trifolium pratense HOM05D006822 ORTHO05D008884 1.3e-119 434.5 523 47.6
CDE11G0821 Ceratophyllum demersum HOM05D006822 ORTHO05D008884 3.7e-119 433.0 519 48.4
HPP92_015074 Vanilla planifolia HOM05D006822 ORTHO05D008884 1.2e-114 417.9 516 48.3
Zm00001eb073430 Zea mays HOM05D006822 ORTHO05D008884 6.8e-113 412.1 500 46.8
Nn1g01174 Nelumbo nucifera HOM05D006822 ORTHO05D008884 1.0e-108 398.3 420 53.6
Lsat_1_v5_gn_3_133341 Lactuca sativa HOM05D006822 ORTHO05D008884 1.1e-107 394.8 498 46.4
Medtr7g075185 Medicago truncatula HOM05D006822 ORTHO05D008884 3.3e-107 393.3 501 45.7
MBI04_g46545_MAGBIO Magnolia biondii HOM05D006822 ORTHO05D008884 4.3e-107 392.9 422 54.5
Actinidia31423 Actinidia chinensis HOM05D006822 ORTHO05D008884 1.1e-105 388.3 510 45.9
HanXRQChr13g0425441 Helianthus annuus HOM05D006822 ORTHO05D008884 3.4e-104 383.3 508 45.5
unitig_22.g5376 Utricularia gibba HOM05D006822 ORTHO05D008884 4.4e-104 382.9 503 47.3
ECA236G3401 Erigeron canadensis HOM05D006822 ORTHO05D008884 4.9e-103 379.4 427 51.3
CARHR000430 Cardamine hirsuta HOM05D006822 ORTHO05D008884 4.8e-98 362.8 217 84.8
Eucgr.L02337 Eucalyptus grandis HOM05D006822 ORTHO05D008884 1.8e-97 360.9 434 48.4
SEGI_38546 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 3.1e-97 360.1 524 42.9
FAN03G3111 Fragaria x ananassa HOM05D006822 ORTHO05D008884 7.1e-94 349.0 519 43.9
CSS0048598 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 1.0e-92 345.1 415 50.8
ATR0757G063 Amborella trichopoda HOM05D006822 ORTHO05D008884 1.0e-87 328.6 380 48.7
COL.COLO4_05508 Corchorus olitorius HOM05D006822 ORTHO05D008884 1.3e-84 318.2 357 48.7
Pp3c3_38070 Physcomitrium patens HOM05D006822 ORTHO05D008884 3.9e-84 316.6 460 42.2
AagrBONN_evm.TU.Sc2ySwM_117.565 Anthoceros agrestis HOM05D006822 ORTHO05D008884 1.9e-83 314.3 464 43.3
ECA240G3107 Erigeron canadensis HOM05D006822 ORTHO05D008884 5.7e-83 312.8 409 46.5
Mapoly0008s0196 Marchantia polymorpha HOM05D006822 ORTHO05D008884 3.1e-81 307.0 459 41.8
Cre07.g325715 Chlamydomonas reinhardtii HOM05D006822 ORTHO05D008884 1.4e-52 211.8 486 33.5
FAN10G0810 Fragaria x ananassa HOM05D006822 ORTHO05D008884 1.5e-51 208.4 219 52.1
SEGI_35234 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 2.2e-39 167.9 234 44.0
PRCOL_00005597 Prasinoderma coloniale HOM05D006822 ORTHO05D008884 1.7e-34 151.8 349 31.5
Cfa022202 Carpinus fangiana HOM05D006822 ORTHO05D004559 3.6e-29 134.0 585 26.8
Medtr7g075430 Medicago truncatula HOM05D006822 ORTHO05D008884 2.0e-16 91.7 167 38.9
CsaV3_4G032230 Cucumis sativus L. HOM05D006822 ORTHO05D008884 4.6e-08 63.9 86 39.5
arahy.Tifrunner.gnm1.ann1.EYK22X Arachis hypogaea HOM05D006822 ORTHO05D008884 5.1e-07 60.5 57 54.4
ATR0757G024 Amborella trichopoda HOM05D006822 ORTHO05D004559 7.3e-06 56.6 30 83.3


User provided reference genes

Program Settings