Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G10330 Arabidopsis lyrata HOM05D012174 ORTHO05D011758 1.9e-117 426.0 243 100.0
AT1G01990 Arabidopsis thaliana HOM05D012174 ORTHO05D011758 1.3e-97 360.1 250 78.0
Carub.0001s0023 Capsella rubella HOM05D012174 ORTHO05D011758 8.7e-86 320.9 240 71.2
Aa31LG1G11310 Aethionema arabicum HOM05D012174 ORTHO05D011758 3.4e-82 308.9 242 65.7
Sp1g00310 Schrenkiella parvula HOM05D012174 ORTHO05D011758 1.9e-80 303.1 245 68.6
A10p00150 Brassica napus HOM05D012174 ORTHO05D011758 2.5e-80 302.8 235 67.7
BraA10t42294Z Brassica rapa HOM05D012174 ORTHO05D011758 2.5e-80 302.8 235 67.7
BcaB03g13628 Brassica carinata HOM05D012174 ORTHO05D011758 2.1e-79 299.7 238 67.6
Thhalv10008646m.g Eutrema salsugineum HOM05D012174 ORTHO05D011758 8.7e-78 294.3 239 68.2
BcaNung05289 Brassica carinata HOM05D012174 ORTHO05D011758 2.5e-77 292.7 244 66.0
C05p00150 Brassica napus HOM05D012174 ORTHO05D011758 2.5e-77 292.7 244 66.0
BolC5t28805H Brassica oleracea HOM05D012174 ORTHO05D011758 2.5e-77 292.7 244 66.0
THA.LOC104814084 Tarenaya hassleriana HOM05D012174 ORTHO05D011758 1.3e-70 270.4 237 60.8
Cpa.g.sc18.105 Carica papaya HOM05D012174 ORTHO05D011758 1.0e-46 191.0 241 47.3
Medtr8g101290 Medicago truncatula HOM05D016094 ORTHO05D011758 6.0e-10 68.9 180 28.3
Ca_17428_v3 Cicer arietinum L. HOM05D016094 ORTHO05D011758 1.1e-08 64.7 182 30.2
Ca_17437_v3 Cicer arietinum L. HOM05D016094 ORTHO05D011758 1.1e-08 64.7 182 30.2
Manes.09G085800 Manihot esculenta HOM05D001509 ORTHO05D001361 2.8e-07 60.1 103 32.0
Cfa001748 Carpinus fangiana HOM05D001509 ORTHO05D011758 8.0e-07 58.5 168 25.6
Glyma.01G077900 Glycine max HOM05D016094 ORTHO05D011758 1.4e-06 57.8 109 31.2
Lj1g0015629 Lotus japonicus HOM05D016094 ORTHO05D011758 1.4e-06 57.8 161 24.8
Aa31LG5G22810 Aethionema arabicum HOM05D001509 ORTHO05D001361 4.0e-06 56.2 191 27.7
Manes.08G075200 Manihot esculenta HOM05D001509 ORTHO05D001361 5.2e-06 55.8 103 30.1
TWI74G0580 Tripterygium wilfordii HOM05D001509 ORTHO05D001361 6.8e-06 55.5 192 27.1
Potri.016G080000 Populus trichocarpa HOM05D001509 ORTHO05D001361 8.9e-06 55.1 192 27.1


User provided reference genes

Program Settings