Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G10130 Arabidopsis lyrata HOM05D006055 ORTHO05D007480 1.6e-191 672.5 335 100.0
AT1G02100 Arabidopsis thaliana HOM05D006055 ORTHO05D007480 1.2e-178 629.8 335 94.9
BcaC07g42339 Brassica carinata HOM05D006055 ORTHO05D007480 1.2e-175 619.8 337 92.3
Sp1g00170 Schrenkiella parvula HOM05D006055 ORTHO05D007480 2.8e-175 618.6 339 91.4
Carub.0001s0012 Capsella rubella HOM05D006055 ORTHO05D007480 3.6e-175 618.2 337 92.6
Thhalv10008126m.g Eutrema salsugineum HOM05D006055 ORTHO05D007480 3.6e-175 618.2 334 91.9
CARHR000230 Cardamine hirsuta HOM05D006055 ORTHO05D007480 1.8e-174 615.9 339 92.9
BcaC07g42437 Brassica carinata HOM05D006055 ORTHO05D007480 5.1e-169 597.8 341 89.7
A09p69350 Brassica napus HOM05D006055 ORTHO05D007480 1.4e-158 563.1 362 82.3
BolC8t52925H Brassica oleracea HOM05D006055 ORTHO05D007480 1.4e-158 563.1 362 82.3
BraA09t42280Z Brassica rapa HOM05D006055 ORTHO05D007480 9.9e-157 557.0 360 82.2
GSVIVG01018274001 Vitis vinifera HOM05D006055 ORTHO05D007480 1.5e-152 543.1 325 81.5
COL.COLO4_12412 Corchorus olitorius HOM05D006055 ORTHO05D007480 9.6e-152 540.4 338 79.6
Gohir.A08G029400 Gossypium hirsutum HOM05D006055 ORTHO05D007480 2.1e-151 539.3 337 78.9
Duzib138G0472 Durio zibethinus HOM05D006055 ORTHO05D007480 1.4e-150 536.6 339 79.1
Manes.05G054600 Manihot esculenta HOM05D006055 ORTHO05D007480 1.4e-150 536.6 321 81.0
QL04p030364 Quercus lobata HOM05D006055 ORTHO05D007480 1.4e-150 536.6 338 77.8
CANSAT21G1800 Cannabis sativa HOM05D006055 ORTHO05D007480 2.4e-150 535.8 324 79.3
CiPaw.13G026500 Carya illinoinensis HOM05D006055 ORTHO05D007480 4.0e-150 535.0 338 77.2
Thecc.01G394500 Theobroma cacao HOM05D006055 ORTHO05D007480 7.6e-149 530.8 321 81.0
CANSAT21G1956 Cannabis sativa HOM05D006055 ORTHO05D007480 1.0e-148 530.4 324 78.7
CSS0024076 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 1.3e-148 530.0 340 76.5
Ciclev10021096m.g Citrus clementina HOM05D006055 ORTHO05D007480 3.8e-148 528.5 325 78.5
Potri.014G047300 Populus trichocarpa HOM05D006055 ORTHO05D007480 6.5e-148 527.7 340 77.1
FvH4_7g10160 Fragaria vesca HOM05D006055 ORTHO05D007480 8.4e-148 527.3 338 76.3
Eucgr.D01230 Eucalyptus grandis HOM05D006055 ORTHO05D007480 1.1e-147 526.9 332 76.5
Hma1.2p1_0009F.1_g005960 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 1.1e-147 526.9 341 75.7
PGR004G2446 Punica granatum HOM05D006055 ORTHO05D007480 1.1e-147 526.9 340 77.6
TWI14G0600 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 1.9e-147 526.2 339 77.0
TAR375G0976 Trochodendron aralioides HOM05D006055 ORTHO05D007480 1.9e-147 526.2 339 77.0
MD07G1108400 Malus domestica HOM05D006055 ORTHO05D007480 3.2e-147 525.4 320 79.7
Nn1g00856 Nelumbo nucifera HOM05D006055 ORTHO05D007480 4.2e-147 525.0 337 75.7
FAN06G3912 Fragaria x ananassa HOM05D006055 ORTHO05D007480 6.0e-146 521.2 346 74.9
PGR144G0002 Punica granatum HOM05D006055 ORTHO05D007480 6.0e-146 521.2 319 79.9
Actinidia12146 Actinidia chinensis HOM05D006055 ORTHO05D007480 7.9e-146 520.8 322 78.6
Gorai.004G039000 Gossypium raimondii HOM05D006055 ORTHO05D007480 1.0e-145 520.4 379 70.7
Lj1g0005705 Lotus japonicus HOM05D006055 ORTHO05D007480 1.8e-145 519.6 327 77.1
Atru.chr5.130 Acer truncatum HOM05D006055 ORTHO05D007480 3.0e-145 518.8 321 79.8
RcHm_v2.0_Chr1g0347871 Rosa chinensis HOM05D006055 ORTHO05D007480 3.0e-145 518.8 338 76.3
Gohir.D08G040100 Gossypium hirsutum HOM05D006055 ORTHO05D007480 8.7e-145 517.3 378 70.6
Solyc01g090280.4 Solanum lycopersicum HOM05D006055 ORTHO05D007480 2.5e-144 515.8 324 76.9
Sopen01g036070 Solanum pennellii HOM05D006055 ORTHO05D007480 2.5e-144 515.8 324 76.9
MELO3C022277.2 Cucumis melo HOM05D006055 ORTHO05D007480 3.3e-144 515.4 321 76.3
Nitab4.5_0000920g0150 Nicotiana tabacum HOM05D006055 ORTHO05D007480 4.3e-144 515.0 322 77.3
FAN01G2488 Fragaria x ananassa HOM05D006055 ORTHO05D007480 5.7e-144 514.6 346 74.0
Lalb_Chr13g0290591 Lupinus albus HOM05D006055 ORTHO05D007480 5.7e-144 514.6 320 78.1
PSO063G7218 Papaver somniferum HOM05D006055 ORTHO05D007480 1.3e-143 513.5 324 77.5
Sed0027680 Sechium edule HOM05D006055 ORTHO05D007480 1.3e-143 513.5 318 78.0
FAN10G0847 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.6e-143 513.1 346 73.7
Nitab4.5_0013736g0020 Nicotiana tabacum HOM05D006055 ORTHO05D007480 1.6e-143 513.1 322 77.6
Cpa.g.sc101.4 Carica papaya HOM05D006055 ORTHO05D007480 3.7e-143 511.9 321 78.8
Prupe.2G131200 Prunus persica HOM05D006055 ORTHO05D007480 3.7e-143 511.9 339 74.0
SGA_v2.0_scaffold43G16538 Striga asiatica HOM05D006055 ORTHO05D007480 3.7e-143 511.9 324 77.8
PSO832G3098 Papaver somniferum HOM05D006055 ORTHO05D007480 8.2e-143 510.8 324 77.2
Psat0s3739g0040 Pisum sativum HOM05D006055 ORTHO05D007480 1.4e-142 510.0 317 77.3
MSTRG.28152 Avicennia marina HOM05D006055 ORTHO05D007480 1.8e-142 509.6 323 78.0
Peaxi162Scf00475g00522 Petunia axillaris HOM05D006055 ORTHO05D007480 2.4e-142 509.2 316 78.8
Ca_08070_v3 Cicer arietinum L. HOM05D006055 ORTHO05D007480 3.1e-142 508.8 317 77.3
Aa31LG1G11510 Aethionema arabicum HOM05D006055 ORTHO05D007480 4.1e-142 508.4 283 89.8
Medtr7g081715 Medicago truncatula HOM05D006055 ORTHO05D007480 5.3e-142 508.1 336 75.3
CAN.G1473.12 Capsicum annuum HOM05D006055 ORTHO05D007480 6.9e-142 507.7 337 73.6
CsaV3_6G008610 Cucumis sativus L. HOM05D006055 ORTHO05D007480 6.9e-142 507.7 321 75.4
Glyma.18G252000 Glycine max HOM05D006055 ORTHO05D007480 6.9e-142 507.7 328 75.3
Sabra14G0034300 Salix brachista HOM05D006055 ORTHO05D007480 7.6e-141 504.2 340 74.1
arahy.Tifrunner.gnm1.ann1.JP1X2J Arachis hypogaea HOM05D006055 ORTHO05D007480 1.0e-140 503.8 336 73.5
arahy.Tifrunner.gnm1.ann1.C7FV9J Arachis hypogaea HOM05D006055 ORTHO05D007480 3.8e-140 501.9 336 73.2
TPR.G14105 Trifolium pratense HOM05D006055 ORTHO05D007480 3.8e-140 501.9 319 76.8
ECA240G2571 Erigeron canadensis HOM05D006055 ORTHO05D007480 6.5e-140 501.1 319 76.5
FAN10G2268 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.1e-139 500.4 369 69.1
Dinv43619 Davidia involucrata HOM05D006055 ORTHO05D007480 7.2e-139 497.7 301 80.7
Glyma.13G187100 Glycine max HOM05D006055 ORTHO05D007480 7.2e-139 497.7 324 74.7
HanXRQChr13g0423211 Helianthus annuus HOM05D006055 ORTHO05D007480 2.7e-138 495.7 323 75.2
CSS0048269 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 7.9e-138 494.2 341 72.1
Rhsim07G0035700 Rhododendron simsii HOM05D006055 ORTHO05D007480 1.3e-137 493.4 332 74.7
vmacro13494 Vaccinium macrocarpon HOM05D006055 ORTHO05D007480 7.4e-136 487.6 309 77.3
Migut.N01738 Erythranthe guttata HOM05D006055 ORTHO05D007480 2.2e-135 486.1 328 73.8
CDE06G0143 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 1.1e-134 483.8 316 74.7
Cc02_g25090 Coffea canephora HOM05D006055 ORTHO05D007480 7.7e-133 477.6 294 79.6
Os06g0140100 Oryza sativa ssp. japonica HOM05D006055 ORTHO05D007480 2.9e-132 475.7 312 72.8
FAN03G3321 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.1e-131 473.8 341 69.8
FAN06G2084 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.6e-130 469.9 372 65.1
SGA_v2.0_scaffold116G32294 Striga asiatica HOM05D006055 ORTHO05D007480 1.6e-130 469.9 356 67.7
Aqoxy7G00862 Aquilegia oxysepala HOM05D006055 ORTHO05D007480 2.7e-130 469.2 302 76.2
Ah.16g103830 Amaranthus hybridus HOM05D006055 ORTHO05D007480 4.4e-128 461.8 327 69.7
Duzib133G1573 Durio zibethinus HOM05D006055 ORTHO05D007480 7.4e-128 461.1 296 77.4
Oeu011253.1 Olea europaea HOM05D006055 ORTHO05D007480 3.7e-127 458.8 284 80.3
Cfa011074 Carpinus fangiana HOM05D006055 ORTHO05D007480 6.3e-127 458.0 285 77.5
SalBow5G1596 Salvia bowleyana HOM05D006055 ORTHO05D007480 9.1e-126 454.1 372 64.0
Lsat_1_v5_gn_3_127241 Lactuca sativa HOM05D006055 ORTHO05D007480 1.5e-125 453.4 324 69.8
Phvul.011G190400 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 3.4e-125 452.2 325 70.2
Hund17088 Selenicereus undatus HOM05D006055 ORTHO05D007480 5.2e-121 438.3 337 67.7
Sc02g0003100 Simmondsia chinensis HOM05D006055 ORTHO05D007480 9.7e-120 434.1 316 69.9
Lj9C557T10 Lonicera japonica HOM05D006055 ORTHO05D007480 1.3e-119 433.7 335 68.1
SalBow5G4451 Salvia bowleyana HOM05D006055 ORTHO05D007480 2.2e-119 433.0 371 62.5
Hma1.2p1_0009F.1_g005970 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 6.3e-119 431.4 267 77.2
AUR62013746 Chenopodium quinoa HOM05D006055 ORTHO05D007480 1.8e-118 429.9 280 75.7
C08p54160 Brassica napus HOM05D006055 ORTHO05D007480 5.5e-115 418.3 262 83.6
MD02G1211800 Malus domestica HOM05D006055 ORTHO05D007480 4.4e-112 408.7 263 77.6
AUR62023405 Chenopodium quinoa HOM05D006055 ORTHO05D007480 7.5e-112 407.9 332 65.1
ATR0057G026 Amborella trichopoda HOM05D006055 ORTHO05D007480 2.4e-110 402.9 302 66.6
Glyma.09G242700 Glycine max HOM05D006055 ORTHO05D007480 3.1e-110 402.5 283 70.7
Mapoly0013s0063 Marchantia polymorpha HOM05D006055 ORTHO05D007480 2.0e-109 399.8 315 60.0
Zm00001eb270250 Zea mays HOM05D006055 ORTHO05D007480 2.7e-109 399.4 290 67.2
EL10Ac1g00759 Beta vulgaris HOM05D006055 ORTHO05D007480 3.8e-108 395.6 278 70.9
AagrBONN_evm.TU.Sc2ySwM_344.4855 Anthoceros agrestis HOM05D006055 ORTHO05D007480 1.5e-107 393.7 324 60.5
MBI04_g33722_MAGBIO Magnolia biondii HOM05D006055 ORTHO05D007480 1.2e-104 384.0 322 63.0
TWI14G1276 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 7.0e-102 374.8 233 80.7
Pp3c6_20710 Physcomitrium patens HOM05D006055 ORTHO05D007480 2.0e-101 373.2 327 56.0
SMO169G0267 Selaginella moellendorffii HOM05D006055 ORTHO05D007480 3.5e-101 372.5 314 58.3
Haze_02842 Corylus avellana HOM05D006055 ORTHO05D007480 4.7e-98 362.1 277 67.5
ClCG06G002510 Citrullus lanatus HOM05D006055 ORTHO05D007480 2.0e-96 356.7 280 65.7
unitig_578.g16712 Utricularia gibba HOM05D006055 ORTHO05D007480 2.0e-96 356.7 238 72.7
CBR_g29813 Chara braunii HOM05D006055 ORTHO05D007480 3.8e-92 342.4 316 53.8
SEGI_37557 Sequoiadendron giganteum HOM05D006055 ORTHO05D007480 5.9e-85 318.5 234 65.4
CDE06G0088 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 2.3e-81 306.6 220 70.0
ECA240G0951 Erigeron canadensis HOM05D006055 ORTHO05D007480 1.6e-74 283.9 224 67.9
Cre04.g229350 Chlamydomonas reinhardtii HOM05D006055 ORTHO05D007480 4.1e-70 269.2 378 40.7
VMungo1127G0075 Vigna mungo HOM05D006055 ORTHO05D007480 1.1e-51 208.0 146 74.7
Actinidia32500 Actinidia chinensis HOM05D006055 ORTHO05D007480 1.4e-49 201.1 177 59.9
MCO09G792 Micromonas commoda HOM05D006055 ORTHO05D007480 5.3e-49 199.1 328 37.5
Gohir.A09G116600 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.7e-47 194.1 143 69.2
SHI13615 Sapria himalayana HOM05D006055 ORTHO05D007480 1.6e-42 177.6 112 72.3
HPP92_022088 Vanilla planifolia HOM05D006055 ORTHO05D007480 3.7e-42 176.4 129 67.4
PRCOL_00000228 Prasinoderma coloniale HOM05D006055 ORTHO05D007480 8.4e-39 165.2 292 36.3
Gohir.D08G159633 Gossypium hirsutum HOM05D006055 ORTHO05D007480 8.4e-31 138.7 97 70.1
Zm00001eb438620 Zea mays HOM05D006055 ORTHO05D007480 1.4e-22 111.3 97 57.7
SHI13613 Sapria himalayana HOM05D006055 ORTHO05D007480 8.5e-15 85.5 67 61.2
MD02G1212000 Malus domestica HOM05D006055 ORTHO05D007480 4.2e-14 83.2 63 63.5
Phvul.008G046701 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 2.3e-12 77.4 52 73.1


User provided reference genes

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