Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G10060 Arabidopsis lyrata HOM05D007841 ORTHO05D009919 5.6e-33 143.7 72 100.0
AT1G02160 Arabidopsis thaliana HOM05D007841 ORTHO05D009919 6.2e-32 140.2 72 97.2
Carub.0001s0004 Capsella rubella HOM05D007841 ORTHO05D009919 8.1e-32 139.8 72 97.2
Thhalv10009237m.g Eutrema salsugineum HOM05D007841 ORTHO05D009919 6.9e-31 136.7 73 97.3
CARHR000160 Cardamine hirsuta HOM05D007841 ORTHO05D009919 9.0e-31 136.3 74 95.9
BcaB03g13636 Brassica carinata HOM05D000300 ORTHO05D000383 4.5e-30 134.0 73 95.9
C05p00040 Brassica napus HOM05D007841 ORTHO05D009919 1.7e-29 132.1 73 94.5
BolC5t28791H Brassica oleracea HOM05D007841 ORTHO05D009919 1.7e-29 132.1 73 94.5
Duzib138G1421 Durio zibethinus HOM05D007841 ORTHO05D009919 3.0e-26 121.3 72 81.9
Gohir.D12G101400 Gossypium hirsutum HOM05D007841 ORTHO05D009919 8.7e-26 119.8 72 80.6
Gorai.008G110500 Gossypium raimondii HOM05D007841 ORTHO05D009919 8.7e-26 119.8 72 80.6
THA.LOC104814059 Tarenaya hassleriana HOM05D007841 ORTHO05D009919 8.7e-26 119.8 64 92.2
CiPaw.14G018000 Carya illinoinensis HOM05D007841 ORTHO05D009919 1.1e-25 119.4 72 79.2
Lj1g0014858 Lotus japonicus HOM05D007841 ORTHO05D009919 1.1e-25 119.4 72 83.3
Phvul.008G138900 Phaseolus vulgaris HOM05D007841 ORTHO05D009919 1.5e-25 119.0 72 81.9
Prupe.2G120100 Prunus persica HOM05D007841 ORTHO05D009919 1.5e-25 119.0 72 81.9
CAN.G756.38 Capsicum annuum HOM05D007841 ORTHO05D009919 1.9e-25 118.6 70 82.9
CANSAT25G3347 Cannabis sativa HOM05D007841 ORTHO05D009919 2.5e-25 118.2 64 89.1
CANSAT25G3825 Cannabis sativa HOM05D007841 ORTHO05D009919 2.5e-25 118.2 64 89.1
ECA248G0141 Erigeron canadensis HOM05D007841 ORTHO05D009919 2.5e-25 118.2 71 81.7
HanXRQChr01g0019691 Helianthus annuus HOM05D007841 ORTHO05D009919 4.3e-25 117.5 71 81.7
Glyma.08G340600 Glycine max HOM05D007841 ORTHO05D009919 5.7e-25 117.1 72 81.9
EL10Ac1g00736 Beta vulgaris HOM05D007841 ORTHO05D009919 7.4e-25 116.7 72 80.6
Gohir.A12G098200 Gossypium hirsutum HOM05D007841 ORTHO05D009919 7.4e-25 116.7 72 77.8
Hma1.2p1_2138F.1_g314930 Hydrangea macrophylla HOM05D007841 ORTHO05D009919 7.4e-25 116.7 71 80.3
Oeu034848.1 Olea europaea HOM05D007841 ORTHO05D009919 7.4e-25 116.7 72 79.2
Medtr7g050540 Medicago truncatula HOM05D007841 ORTHO05D009919 1.6e-24 115.5 72 80.6
Lsat_1_v5_gn_1_83981 Lactuca sativa HOM05D007841 ORTHO05D009919 2.1e-24 115.2 71 78.9
PSO675G0834 Papaver somniferum HOM05D007841 ORTHO05D009919 2.1e-24 115.2 69 81.2
Atru.chr5.91 Acer truncatum HOM05D007841 ORTHO05D009919 2.8e-24 114.8 63 88.9
Potri.014G051850 Populus trichocarpa HOM05D007841 ORTHO05D009919 2.8e-24 114.8 72 79.2
Lalb_Chr03g0040951 Lupinus albus HOM05D007841 ORTHO05D009919 4.8e-24 114.0 72 79.2
Psat3g152880 Pisum sativum HOM05D007841 ORTHO05D009919 4.8e-24 114.0 72 79.2
PGR004G1954 Punica granatum HOM05D007841 ORTHO05D009919 4.8e-24 114.0 72 80.6
Actinidia30942 Actinidia chinensis HOM05D007841 ORTHO05D009919 6.2e-24 113.6 69 78.3
arahy.Tifrunner.gnm1.ann1.K94MSK Arachis hypogaea HOM05D007841 ORTHO05D009919 6.2e-24 113.6 69 79.7
CsaV3_3G010620 Cucumis sativus L. HOM05D007841 ORTHO05D009919 6.2e-24 113.6 63 88.9
RcHm_v2.0_Chr1g0345181 Rosa chinensis HOM05D007841 ORTHO05D009919 1.1e-23 112.8 63 85.7
Sed0011386 Sechium edule HOM05D007841 ORTHO05D009919 1.1e-23 112.8 66 86.4
Eucgr.D01199 Eucalyptus grandis HOM05D007841 ORTHO05D009919 1.4e-23 112.5 72 76.4
PSO732G0215 Papaver somniferum HOM05D007841 ORTHO05D009919 1.8e-23 112.1 66 83.3
ClCG05G003010 Citrullus lanatus HOM05D007841 ORTHO05D009919 3.1e-23 111.3 71 78.9
COL.COLO4_12370 Corchorus olitorius HOM05D007841 ORTHO05D009919 3.1e-23 111.3 72 76.4
Solyc01g088770.3 Solanum lycopersicum HOM05D007841 ORTHO05D009919 3.1e-23 111.3 70 75.7
Sopen01g035610 Solanum pennellii HOM05D007841 ORTHO05D009919 3.1e-23 111.3 70 75.7
PGSC0003DMG400001726 Solanum tuberosum HOM05D007841 ORTHO05D009919 3.1e-23 111.3 70 75.7
Thecc.01G400700 Theobroma cacao HOM05D007841 ORTHO05D009919 5.3e-23 110.5 74 79.7
MD02G1221100 Malus domestica HOM05D007841 ORTHO05D009919 6.9e-23 110.2 72 76.4
Cc02_g25410 Coffea canephora HOM05D007841 ORTHO05D009919 9.0e-23 109.8 67 79.1
Sp1g00090 Schrenkiella parvula HOM05D007841 ORTHO05D009919 1.2e-22 109.4 57 96.5
Migut.N01723 Erythranthe guttata HOM05D007841 ORTHO05D009919 1.5e-22 109.0 69 78.3
Aqoxy7G00835 Aquilegia oxysepala HOM05D007841 ORTHO05D009919 2.6e-22 108.2 64 84.4
Manes.05G057100 Manihot esculenta HOM05D007841 ORTHO05D009919 4.5e-22 107.5 66 78.8
MD07G1096500 Malus domestica HOM05D007841 ORTHO05D009919 5.8e-22 107.1 71 77.5
BraA10t42285Z Brassica rapa HOM05D007841 ORTHO05D009919 1.0e-21 106.3 58 93.1
FvH4_7g09140 Fragaria vesca HOM05D007841 ORTHO05D009919 1.4e-20 102.4 63 82.5
GSVIVG01018320001 Vitis vinifera HOM05D007841 ORTHO05D009919 1.2e-19 99.4 72 70.8
unitig_22.g6702 Utricularia gibba HOM05D007841 ORTHO05D009919 1.6e-19 99.0 65 75.4
Hund17114 Selenicereus undatus HOM05D007841 ORTHO05D009919 1.0e-18 96.3 56 78.6
Zm00001eb067220 Zea mays HOM05D007841 ORTHO05D009919 2.3e-18 95.1 63 77.8
Haze_02887 Corylus avellana HOM05D000061 ORTHO05D000915 3.9e-18 94.4 60 71.7
FAN06G3108 Fragaria x ananassa HOM05D007841 ORTHO05D009919 3.9e-18 94.4 58 81.0
Os04g0665000 Oryza sativa ssp. japonica HOM05D007841 ORTHO05D009919 1.5e-17 92.4 63 76.2
Nitab4.5_0004425g0050 Nicotiana tabacum HOM05D007841 ORTHO05D009919 5.7e-17 90.5 62 71.0
Peaxi162Scf00793g00363 Petunia axillaris HOM05D007841 ORTHO05D009919 5.7e-17 90.5 53 79.2
arahy.Tifrunner.gnm1.ann1.X5EUJ4 Arachis hypogaea HOM05D007841 ORTHO05D009919 7.4e-17 90.1 54 77.8
PSO732G0130 Papaver somniferum HOM05D007841 ORTHO05D009919 1.6e-16 89.0 49 83.7
Sc02g0003210 Simmondsia chinensis HOM05D007841 ORTHO05D009919 6.3e-16 87.0 59 74.6
Ciclev10023064m.g Citrus clementina HOM05D007841 ORTHO05D009919 1.4e-15 85.9 47 85.1
Nn6g33742 Nelumbo nucifera HOM05D007841 ORTHO05D009919 1.8e-15 85.5 56 69.6
SalBow4G0679 Salvia bowleyana HOM05D007841 ORTHO05D009919 2.4e-15 85.1 55 67.3
Aa31LG1G11570 Aethionema arabicum HOM05D007841 ORTHO05D009919 4.1e-15 84.3 48 87.5
CSS0006405 Camellia sinensis var. sinensis HOM05D007841 ORTHO05D009919 2.6e-14 81.6 55 67.3
Sabra14G0036700 Salix brachista HOM05D007841 ORTHO05D009919 4.5e-14 80.9 41 95.1
AUR62023385 Chenopodium quinoa HOM05D007841 ORTHO05D009919 5.9e-14 80.5 56 69.6
AUR62013771 Chenopodium quinoa HOM05D007841 ORTHO05D009919 7.7e-14 80.1 56 69.6
FAN01G1055 Fragaria x ananassa HOM05D007841 ORTHO05D009919 1.3e-13 79.3 61 68.9
FAN03G2201 Fragaria x ananassa HOM05D007841 ORTHO05D009919 1.3e-13 79.3 61 68.9
Pp3c22_2080 Physcomitrium patens HOM05D007841 ORTHO05D009919 1.3e-13 79.3 66 62.1
TAR375G0262 Trochodendron aralioides HOM05D006103 ORTHO05D007468 1.2e-11 72.8 45 80.0
AagrBONN_evm.TU.Sc2ySwM_228.3132 Anthoceros agrestis HOM05D007841 ORTHO05D009919 2.1e-11 72.0 53 66.0
Mapoly0181s0011 Marchantia polymorpha HOM05D007841 ORTHO05D009919 6.7e-10 67.0 59 54.2
Actinidia05779 Actinidia chinensis HOM05D007841 ORTHO05D009919 1.1e-09 66.2 34 85.3
CAN.G756.35 Capsicum annuum HOM05D007841 ORTHO05D009919 9.7e-09 63.2 33 90.9
A10p00070 Brassica napus HOM05D007841 ORTHO05D009919 3.4e-06 54.7 33 87.9


User provided reference genes

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