Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL191U10030 Arabidopsis lyrata HOM05D003788 ORTHO05D004633 0.0e+00 1842.0 963 100.0
AL8G31870 Arabidopsis lyrata HOM05D003788 ORTHO05D004633 0.0e+00 1783.1 995 95.2
AT5G56240 Arabidopsis thaliana HOM05D003788 ORTHO05D004633 0.0e+00 1508.0 999 83.1
Carub.0008s1656 Capsella rubella HOM05D003788 ORTHO05D004633 0.0e+00 1404.4 1007 76.1
Thhalv10012573m.g Eutrema salsugineum HOM05D003788 ORTHO05D004633 0.0e+00 1250.3 1007 72.7
Sp6g18090 Schrenkiella parvula HOM05D003788 ORTHO05D004633 0.0e+00 1099.0 853 72.7
BcaB05g22251 Brassica carinata HOM05D003788 ORTHO05D004633 3.2e-301 1038.5 1064 61.1
C09p47480 Brassica napus HOM05D003788 ORTHO05D004633 1.8e-288 996.1 1027 59.7
BolC9t57603H Brassica oleracea HOM05D003788 ORTHO05D004633 2.7e-287 992.3 1032 59.6
A10p13490 Brassica napus HOM05D003788 ORTHO05D004633 1.1e-280 970.3 1037 59.2
C02p15420 Brassica napus HOM05D003788 ORTHO05D004633 2.4e-280 969.1 1044 61.5
BolC2t07656H Brassica oleracea HOM05D003788 ORTHO05D004633 2.4e-280 969.1 1044 61.5
BraA10t43453Z Brassica rapa HOM05D003788 ORTHO05D004633 4.1e-280 968.4 1037 59.1
BcaC04g20117 Brassica carinata HOM05D003788 ORTHO05D004633 5.4e-280 968.0 1031 58.8
CARHR269640 Cardamine hirsuta HOM05D003788 ORTHO05D004633 7.0e-272 941.0 1011 61.4
BraA03t10668Z Brassica rapa HOM05D003788 ORTHO05D004633 5.0e-270 934.9 1064 58.5
A03p13640 Brassica napus HOM05D003788 ORTHO05D004633 1.8e-267 926.4 1083 57.5
C03p15990 Brassica napus HOM05D003788 ORTHO05D004633 5.4e-264 914.8 1029 58.9
BcaC01g06409 Brassica carinata HOM05D003788 ORTHO05D004633 9.2e-264 914.1 1031 58.6
BolC3t14027H Brassica oleracea HOM05D003788 ORTHO05D004633 4.0e-259 898.7 1025 56.9
A02p09290 Brassica napus HOM05D003788 ORTHO05D004633 1.9e-256 889.8 1050 57.3
BraA02t05991Z Brassica rapa HOM05D003788 ORTHO05D004633 5.4e-256 888.3 1057 56.9
BcaB01g04386 Brassica carinata HOM05D003788 ORTHO05D004633 1.3e-238 830.5 1008 55.9
BcaC03g14236 Brassica carinata HOM05D003788 ORTHO05D004633 7.1e-216 755.0 880 59.0
Aa31LG3G12140 Aethionema arabicum HOM05D003788 ORTHO05D004633 1.8e-214 750.4 1086 51.7
THA.LOC104811704 Tarenaya hassleriana HOM05D003788 ORTHO05D004633 2.8e-151 540.4 1080 44.0
Thhalv10012702m.g Eutrema salsugineum HOM05D003788 ORTHO05D004633 9.3e-131 472.2 995 42.1
CARHR269650 Cardamine hirsuta HOM05D003788 ORTHO05D004633 1.4e-126 458.4 998 42.3
Sp6g18100 Schrenkiella parvula HOM05D003788 ORTHO05D004633 1.5e-125 454.9 985 42.0
AL8G31880 Arabidopsis lyrata HOM05D003788 ORTHO05D004633 2.6e-125 454.1 986 42.2
Carub.0008s1657 Capsella rubella HOM05D003788 ORTHO05D004633 3.4e-125 453.8 1015 42.0
AT5G56250 Arabidopsis thaliana HOM05D003788 ORTHO05D004633 5.1e-121 439.9 987 41.4
BcaC01g06410 Brassica carinata HOM05D003788 ORTHO05D004633 4.9e-108 396.7 970 38.4
BolC3t14026H Brassica oleracea HOM05D003788 ORTHO05D004633 1.2e-106 392.1 970 38.5
C03p15980 Brassica napus HOM05D003788 ORTHO05D004633 1.9e-104 384.8 979 37.7
BcaB05g22252 Brassica carinata HOM05D003788 ORTHO05D004633 7.4e-104 382.9 913 40.2
BolC2t07655H Brassica oleracea HOM05D003788 ORTHO05D004633 2.6e-101 374.4 921 38.1
BcaC03g14234 Brassica carinata HOM05D003788 ORTHO05D004633 4.5e-101 373.6 921 38.0
C02p15400 Brassica napus HOM05D003788 ORTHO05D004633 4.5e-101 373.6 921 38.2
BcaB01g04387 Brassica carinata HOM05D003788 ORTHO05D004633 6.5e-100 369.8 946 37.6
A02p09250 Brassica napus HOM05D003788 ORTHO05D004633 1.1e-99 369.0 938 38.9
A03p13630 Brassica napus HOM05D003788 ORTHO05D004633 7.9e-98 362.8 954 37.9
BraA03t10667Z Brassica rapa HOM05D003788 ORTHO05D004633 1.1e-96 359.0 952 37.0
C09p47500 Brassica napus HOM05D003788 ORTHO05D004633 2.6e-72 278.1 775 35.2
MD11G1046500 Malus domestica HOM05D003788 ORTHO05D004633 1.4e-70 272.3 1136 30.5
Duzib213G0477 Durio zibethinus HOM05D003788 ORTHO05D004633 2.7e-69 268.1 1158 30.2
MD03G1043400 Malus domestica HOM05D003788 ORTHO05D004633 4.5e-69 267.3 1162 29.4
Thecc.07G001100 Theobroma cacao HOM05D003788 ORTHO05D004633 4.5e-69 267.3 1212 29.1
Duzib268G1743 Durio zibethinus HOM05D003788 ORTHO05D004633 5.9e-69 266.9 1215 28.8
Manes.05G204500 Manihot esculenta HOM05D003788 ORTHO05D004633 2.2e-68 265.0 1207 29.3
Cfa016964 Carpinus fangiana HOM05D003788 ORTHO05D004633 6.5e-68 263.5 1183 29.6
Gorai.013G147700 Gossypium raimondii HOM05D003788 ORTHO05D004633 1.2e-66 259.2 1158 29.6
Gohir.D13G131700 Gossypium hirsutum HOM05D003788 ORTHO05D004633 1.6e-66 258.8 1155 29.2
Manes.01G007100 Manihot esculenta HOM05D003788 ORTHO05D004633 2.7e-66 258.1 1195 29.8
Ciclev10007254m.g Citrus clementina HOM05D003788 ORTHO05D004633 3.6e-66 257.7 1152 29.3
Gohir.A13G128300 Gossypium hirsutum HOM05D003788 ORTHO05D004633 6.1e-66 256.9 1155 29.6
Haze_09919 Corylus avellana HOM05D003788 ORTHO05D004633 2.0e-64 251.9 1125 28.8
Gohir.A08G026000 Gossypium hirsutum HOM05D003788 ORTHO05D004633 2.8e-63 248.1 1071 28.7
Gohir.D08G036500 Gossypium hirsutum HOM05D003788 ORTHO05D004633 8.3e-63 246.5 1110 29.5
Rhsim06G0235500 Rhododendron simsii HOM05D003788 ORTHO05D004633 8.3e-63 246.5 1149 27.6
CSS0001498 Camellia sinensis var. sinensis HOM05D003788 ORTHO05D004633 1.1e-62 246.1 1052 29.1
CSS0046183 Camellia sinensis var. sinensis HOM05D003788 ORTHO05D004633 1.1e-62 246.1 1052 29.1
FAN25G3203 Fragaria x ananassa HOM05D003788 ORTHO05D004633 1.1e-62 246.1 1189 28.3
Atru.chr2.3902 Acer truncatum HOM05D003788 ORTHO05D004633 5.4e-62 243.8 1166 28.6
FAN16G1134 Fragaria x ananassa HOM05D003788 ORTHO05D004633 5.4e-62 243.8 1196 28.0
COL.COLO4_07793 Corchorus olitorius HOM05D003788 ORTHO05D004633 7.0e-62 243.4 1207 28.9
CSS0022631 Camellia sinensis var. sinensis HOM05D003788 ORTHO05D004633 1.6e-61 242.3 1129 29.2
FAN11G0056 Fragaria x ananassa HOM05D003788 ORTHO05D004633 2.0e-61 241.9 1197 27.7
Potri.001G472400 Populus trichocarpa HOM05D003788 ORTHO05D004633 2.0e-61 241.9 1170 29.1
FvH4_3g41530 Fragaria vesca HOM05D003788 ORTHO05D004633 3.5e-61 241.1 1197 27.7
Gorai.004G034500 Gossypium raimondii HOM05D003788 ORTHO05D004633 4.5e-61 240.7 1096 29.1
CiPaw.11G210900 Carya illinoinensis HOM05D003788 ORTHO05D004633 7.7e-61 240.0 1204 29.1
FAN21G2445 Fragaria x ananassa HOM05D003788 ORTHO05D004633 6.5e-60 236.9 1177 27.5
Prupe.6G035800 Prunus persica HOM05D003788 ORTHO05D004633 8.5e-60 236.5 1178 28.5
TWI39G0992 Tripterygium wilfordii HOM05D003788 ORTHO05D004633 8.5e-60 236.5 1183 28.4
PGR031G1033 Punica granatum HOM05D003788 ORTHO05D004633 1.1e-59 236.1 1063 29.4
RcHm_v2.0_Chr5g0074531 Rosa chinensis HOM05D003788 ORTHO05D004633 1.1e-59 236.1 1202 28.7
Sabra16G0320700 Salix brachista HOM05D003788 ORTHO05D004633 3.2e-59 234.6 1208 27.2
QL08p000460 Quercus lobata HOM05D003788 ORTHO05D004633 6.1e-58 230.3 1183 28.2
GSVIVG01014849001 Vitis vinifera HOM05D003788 ORTHO05D004633 1.0e-57 229.6 1013 28.6
Potri.011G169100 Populus trichocarpa HOM05D003788 ORTHO05D004633 1.8e-57 228.8 1218 28.6
THA.LOC104822683 Tarenaya hassleriana HOM05D003788 ORTHO05D004633 2.3e-57 228.4 1007 29.0
ClCG10G003840 Citrullus lanatus HOM05D003788 ORTHO05D004633 1.3e-55 222.6 1188 27.6
ClCG10G003960 Citrullus lanatus HOM05D003788 ORTHO05D004633 3.7e-55 221.1 1188 27.5
Eucgr.F01984 Eucalyptus grandis HOM05D003788 ORTHO05D004633 3.7e-55 221.1 1196 27.3
Dinv40920 Davidia involucrata HOM05D003788 ORTHO05D004633 6.3e-55 220.3 1208 27.6
CsaV3_3G003820 Cucumis sativus L. HOM05D003788 ORTHO05D004633 2.4e-54 218.4 1191 27.4
TWI38G0822 Tripterygium wilfordii HOM05D003788 ORTHO05D004633 2.0e-53 215.3 1170 27.7
Peaxi162Scf00232g00078 Petunia axillaris HOM05D003788 ORTHO05D004633 4.5e-53 214.2 1009 28.8
Dinv19640 Davidia involucrata HOM05D003788 ORTHO05D004633 1.1e-51 209.5 1191 27.4
ClCG00G001230 Citrullus lanatus HOM05D003788 ORTHO05D004633 3.3e-51 208.0 1228 26.6
MELO3C014063.2 Cucumis melo HOM05D003788 ORTHO05D004633 4.3e-51 207.6 1190 27.8
PGSC0003DMG400022144 Solanum tuberosum HOM05D003788 ORTHO05D004633 5.6e-51 207.2 1163 28.1
BcaC04g20115 Brassica carinata HOM05D003788 ORTHO05D004633 9.5e-51 206.5 684 33.5
Sopen07g034380 Solanum pennellii HOM05D003788 ORTHO05D004633 6.1e-50 203.8 1166 27.6
BolC9t57606H Brassica oleracea HOM05D003788 ORTHO05D004633 8.0e-50 203.4 646 33.6
CANSAT11G0655 Cannabis sativa HOM05D003788 ORTHO05D004633 6.8e-49 200.3 1238 26.6
Solyc07g066200.4 Solanum lycopersicum HOM05D003788 ORTHO05D004633 6.8e-49 200.3 1145 28.1
Actinidia31533 Actinidia chinensis HOM05D003788 ORTHO05D004633 2.0e-48 198.7 1125 26.6
Sabra11G0137700 Salix brachista HOM05D003788 ORTHO05D004633 5.7e-48 197.2 1223 26.7
CiPaw.12G143000 Carya illinoinensis HOM05D003788 ORTHO05D004633 7.5e-48 196.8 960 27.5
Oeu015274.1 Olea europaea HOM05D003788 ORTHO05D004633 9.8e-48 196.4 1174 26.2
Nitab4.5_0001732g0050 Nicotiana tabacum HOM05D003788 ORTHO05D004633 3.7e-47 194.5 1115 28.2
Duzib170G0482 Durio zibethinus HOM05D003788 ORTHO05D004633 4.9e-47 194.1 1114 27.1
Lj1A901G37 Lonicera japonica HOM05D003788 ORTHO05D004633 6.4e-47 193.7 1037 27.8
Oeu052883.2 Olea europaea HOM05D003788 ORTHO05D004633 3.2e-46 191.4 1180 26.2
A10p13510 Brassica napus HOM05D003788 ORTHO05D004633 9.2e-46 189.9 667 33.1
Sed0020897 Sechium edule HOM05D003788 ORTHO05D004633 1.2e-45 189.5 1159 27.7
Nitab4.5_0000152g0020 Nicotiana tabacum HOM05D003788 ORTHO05D004633 2.0e-45 188.7 1143 27.9
DCAR_013754 Daucus carota HOM05D003788 ORTHO05D004633 4.6e-45 187.6 1129 28.1
Sed0023936 Sechium edule HOM05D003788 ORTHO05D004633 1.0e-44 186.4 1186 27.2
TWI14G1222 Tripterygium wilfordii HOM05D003788 ORTHO05D004633 1.0e-44 186.4 454 37.0
vmacro11644 Vaccinium macrocarpon HOM05D003788 ORTHO05D004633 2.5e-43 181.8 1087 26.7
MSTRG.16130 Avicennia marina HOM05D003788 ORTHO05D004633 7.3e-43 180.3 1111 26.7
TAR629G3040 Trochodendron aralioides HOM05D003788 ORTHO05D004633 1.8e-41 175.6 1242 25.8
Lj8C184G1 Lonicera japonica HOM05D003788 ORTHO05D004633 6.4e-39 167.2 1088 27.2
MSTRG.7044 Avicennia marina HOM05D003788 ORTHO05D004633 2.4e-38 165.2 1176 25.5
HanXRQChr03g0079411 Helianthus annuus HOM05D003788 ORTHO05D004633 3.2e-38 164.9 935 26.3
THA.LOC104810306 Tarenaya hassleriana HOM05D003788 ORTHO05D004633 9.2e-38 163.3 1048 26.6
TAR626G0610 Trochodendron aralioides HOM05D003788 ORTHO05D004633 9.2e-38 163.3 1220 25.6
SalBow8G5584 Salvia bowleyana HOM05D003788 ORTHO05D004633 1.6e-37 162.5 1216 25.8
BcaC03g14237 Brassica carinata HOM05D003788 ORTHO05D004633 7.8e-37 160.2 144 63.2
TAR627G0146 Trochodendron aralioides HOM05D003788 ORTHO05D004633 7.8e-37 160.2 1232 26.6
ECA240G4117 Erigeron canadensis HOM05D003788 ORTHO05D004633 2.3e-36 158.7 907 27.2
Ah.04g166650 Amaranthus hybridus HOM05D003788 ORTHO05D004633 8.6e-36 156.8 958 26.4
HanXRQChr17g0546861 Helianthus annuus HOM05D003788 ORTHO05D004633 1.1e-35 156.4 941 26.2
ECA236G3073 Erigeron canadensis HOM05D003788 ORTHO05D004633 1.5e-35 156.0 948 25.5
Lsat_1_v5_gn_7_115701 Lactuca sativa HOM05D003788 ORTHO05D004633 2.5e-35 155.2 957 27.1
AUR62035659 Chenopodium quinoa HOM05D003788 ORTHO05D004633 2.1e-34 152.1 1109 26.1
Cc05_g15760 Coffea canephora HOM05D003788 ORTHO05D004633 8.1e-34 150.2 451 34.8
MSTRG.13048 Avicennia marina HOM05D003788 ORTHO05D004633 1.8e-33 149.1 887 26.2
SGA_v2.0_scaffold11G05962 Striga asiatica HOM05D003788 ORTHO05D004633 1.8e-33 149.1 756 26.7
EL10Ac4g07522 Beta vulgaris HOM05D003788 ORTHO05D004633 2.3e-33 148.7 1121 25.8
Nn1g07620 Nelumbo nucifera HOM05D003788 ORTHO05D004633 1.2e-32 146.4 396 33.1
Migut.M01579 Erythranthe guttata HOM05D003788 ORTHO05D004633 2.0e-32 145.6 354 35.9
AUR62017148 Chenopodium quinoa HOM05D003788 ORTHO05D004633 1.3e-31 142.9 1105 26.0
Aqoxy4G02274 Aquilegia oxysepala HOM05D003788 ORTHO05D004633 1.7e-31 142.5 440 32.3
Migut.H01707 Erythranthe guttata HOM05D003788 ORTHO05D004633 1.7e-31 142.5 713 27.1
PSO782G4685 Papaver somniferum HOM05D003788 ORTHO05D004633 2.2e-31 142.1 1115 25.8
MBI15_g35998_MAGBIO Magnolia biondii HOM05D003788 ORTHO05D004633 3.7e-31 141.4 374 34.0
Os04g0471400 Oryza sativa ssp. japonica HOM05D003788 ORTHO05D004633 1.9e-30 139.0 1041 25.3
unitig_37.g12213 Utricularia gibba HOM05D003788 ORTHO05D004633 1.9e-30 139.0 363 35.8
unitig_0.g982 Utricularia gibba HOM05D003788 ORTHO05D004633 4.1e-30 137.9 998 26.1
HPP92_022807 Vanilla planifolia HOM05D003788 ORTHO05D004633 1.2e-29 136.3 399 32.8
Hma1.2p1_0321F.1_g124360 Hydrangea macrophylla HOM05D003788 ORTHO05D004633 2.7e-29 135.2 382 35.1
Sc03g0011790 Simmondsia chinensis HOM05D003788 ORTHO05D004633 3.5e-29 134.8 1025 25.0
MBI14_g10253_MAGBIO Magnolia biondii HOM05D003788 ORTHO05D004633 6.0e-29 134.0 367 34.9
Actinidia30347 Actinidia chinensis HOM05D003788 ORTHO05D004633 1.0e-28 133.3 305 35.1
HPP92_015789 Vanilla planifolia HOM05D003788 ORTHO05D004633 2.3e-28 132.1 349 31.2
BraA02t05990Z Brassica rapa HOM05D003788 ORTHO05D004633 6.6e-28 130.6 216 48.1
unitig_46.g18528 Utricularia gibba HOM05D003788 ORTHO05D004633 8.6e-28 130.2 978 26.0
Actinidia30346 Actinidia chinensis HOM05D003788 ORTHO05D004633 1.1e-27 129.8 407 34.6
HanXRQChr11g0346921 Helianthus annuus HOM05D003788 ORTHO05D004633 1.9e-27 129.0 397 33.2
CARHR218680 Cardamine hirsuta HOM05D003788 ORTHO05D004633 7.3e-27 127.1 212 44.8
ATR0751G208 Amborella trichopoda HOM05D003788 ORTHO05D004633 9.5e-27 126.7 472 29.7
Zm00001eb079970 Zea mays HOM05D003788 ORTHO05D004633 1.6e-26 125.9 451 29.0
Zm00001eb424700 Zea mays HOM05D003788 ORTHO05D004633 3.6e-26 124.8 333 33.3
CDE11G0275 Ceratophyllum demersum HOM05D003788 ORTHO05D004633 6.8e-25 120.6 370 31.1
SGA_v2.0_scaffold7G03552 Striga asiatica HOM05D003788 ORTHO05D004633 6.8e-25 120.6 686 25.7
Lsat_1_v5_gn_9_88661 Lactuca sativa HOM05D003788 ORTHO05D004633 5.8e-24 117.5 717 25.7
Cpa.g.sc12.61 Carica papaya HOM05D003788 ORTHO05D004633 3.8e-23 114.8 413 31.7
Hund23029 Selenicereus undatus HOM05D003788 ORTHO05D004633 1.3e-20 106.3 378 31.2
Cc05_g15750 Coffea canephora HOM05D003788 ORTHO05D004633 1.5e-19 102.8 282 31.9
CDE06G0258 Ceratophyllum demersum HOM05D003788 ORTHO05D004633 8.1e-18 97.1 253 34.0
BcaC03g16336 Brassica carinata HOM05D021359 ORTHO05D016065 1.9e-11 75.9 115 46.1
HPP92_007487 Vanilla planifolia HOM05D003788 ORTHO05D004633 5.3e-09 67.8 136 34.6
CDE05G2211 Ceratophyllum demersum HOM05D003788 ORTHO05D004633 1.3e-07 63.2 333 25.8
SEGI_04749 Sequoiadendron giganteum HOM05D003788 ORTHO05D004633 4.2e-06 58.2 209 29.7


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