Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL188U10010 Arabidopsis lyrata HOM05D012544 ORTHO05D012606 8.9e-40 166.4 79 100.0
Carub.0002s1832 Capsella rubella HOM05D020560 ORTHO05D012606 2.1e-17 92.0 61 65.6
AL4G12860 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 2.4e-16 88.6 60 63.3
AT2G11035 Arabidopsis thaliana HOM05D020560 ORTHO05D012606 1.1e-13 79.7 70 54.3
AL5G31050 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 9.3e-13 76.6 62 50.0
BraA05t20506Z Brassica rapa HOM05D000003 ORTHO05D000283 2.1e-12 75.5 59 50.8
A03p35460 Brassica napus HOM05D000003 ORTHO05D000283 1.0e-11 73.2 57 54.4
BraA03t12723Z Brassica rapa HOM05D000003 ORTHO05D000283 1.0e-11 73.2 57 54.4
BcaB02g10206 Brassica carinata HOM05D012544 ORTHO05D012606 3.9e-11 71.2 59 47.5
C09p45110 Brassica napus HOM05D012544 ORTHO05D012606 8.7e-11 70.1 59 47.5
BcaB08g34383 Brassica carinata HOM05D012544 ORTHO05D012606 1.1e-10 69.7 57 50.9
BcaNung04363 Brassica carinata HOM05D012544 ORTHO05D012606 3.3e-10 68.2 65 43.1
BcaB04g19834 Brassica carinata HOM05D012544 ORTHO05D012606 5.6e-10 67.4 64 43.8
BcaB01g03922 Brassica carinata HOM05D012544 ORTHO05D012606 1.3e-09 66.2 64 42.2
BcaB04g20331 Brassica carinata HOM05D012544 ORTHO05D012606 6.2e-09 63.9 60 45.0
Carub.0003s2835 Capsella rubella HOM05D012544 ORTHO05D012606 6.2e-09 63.9 62 41.9
BraA10t42734Z Brassica rapa HOM05D000003 ORTHO05D000283 1.4e-08 62.8 63 46.0
BraA02t06952Z Brassica rapa HOM05D000003 ORTHO05D000283 9.0e-08 60.1 62 48.4
BcaC06g34861 Brassica carinata HOM05D012544 ORTHO05D012606 5.8e-07 57.4 42 54.8
BolC4t22129H Brassica oleracea HOM05D050832 ORTHO05D012606 3.8e-06 54.7 62 45.2


User provided reference genes

Program Settings