Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1041U10010 Arabidopsis lyrata HOM05D000124 ORTHO05D000056 1.2e-32 142.5 69 100.0
AL8G38320 Arabidopsis lyrata HOM05D000124 ORTHO05D000056 3.5e-32 141.0 68 100.0
AT5G61590 Arabidopsis thaliana HOM05D000124 ORTHO05D000056 3.1e-28 127.9 69 92.8
CARHR275380 Cardamine hirsuta HOM05D000124 ORTHO05D000056 5.8e-27 123.6 70 88.6
Carub.0008s2228 Capsella rubella HOM05D000124 ORTHO05D000056 1.3e-26 122.5 70 87.1
Thhalv10005285m.g Eutrema salsugineum HOM05D000124 ORTHO05D000056 8.4e-26 119.8 70 82.9
BcaNung01425 Brassica carinata HOM05D000124 ORTHO05D000056 3.2e-25 117.9 70 84.3
Sp2g24800 Schrenkiella parvula HOM05D000124 ORTHO05D000056 5.4e-25 117.1 70 82.9
A09p07350 Brassica napus HOM05D000124 ORTHO05D000056 1.3e-23 112.5 70 81.4
BraA09t36390Z Brassica rapa HOM05D000124 ORTHO05D000056 1.3e-23 112.5 70 81.4
BcaC04g23442 Brassica carinata HOM05D000124 ORTHO05D000056 5.1e-23 110.5 70 80.0
C07p45290 Brassica napus HOM05D000124 ORTHO05D000056 2.5e-22 108.2 70 80.0
BolC7t45052H Brassica oleracea HOM05D000124 ORTHO05D000056 4.3e-22 107.5 70 80.0
C09p08290 Brassica napus HOM05D000124 ORTHO05D000056 7.3e-22 106.7 70 78.6
BolC9t53739H Brassica oleracea HOM05D000124 ORTHO05D000056 7.3e-22 106.7 70 78.6
BraA03t13847Z Brassica rapa HOM05D000124 ORTHO05D000056 1.2e-21 105.9 70 78.6
A03p47190 Brassica napus HOM05D000124 ORTHO05D000056 2.1e-21 105.1 70 78.6
Thhalv10014666m.g Eutrema salsugineum HOM05D000124 ORTHO05D000056 1.0e-15 86.3 71 64.8
Aa31LG3G18840 Aethionema arabicum HOM05D000124 ORTHO05D000056 1.3e-15 85.9 70 64.3
BcaC06g32491 Brassica carinata HOM05D000124 ORTHO05D000056 1.1e-14 82.8 71 62.0
BcaC06g32492 Brassica carinata HOM05D000124 ORTHO05D000056 1.1e-14 82.8 71 62.0
A10p29320 Brassica napus HOM05D000124 ORTHO05D000056 1.1e-14 82.8 71 62.0
C09p69690 Brassica napus HOM05D000124 ORTHO05D000056 1.1e-14 82.8 71 62.0
BolC9t59712H Brassica oleracea HOM05D000124 ORTHO05D000056 1.1e-14 82.8 71 62.0
BraA10t44976Z Brassica rapa HOM05D000124 ORTHO05D000056 1.1e-14 82.8 71 62.0
Carub.0006s0656 Capsella rubella HOM05D000124 ORTHO05D000056 1.5e-14 82.4 70 62.9
AL6G17890 Arabidopsis lyrata HOM05D000124 ORTHO05D000056 3.3e-14 81.3 70 62.9
AT5G07580 Arabidopsis thaliana HOM05D000124 ORTHO05D000056 4.3e-14 80.9 70 62.9
THA.LOC104818307 Tarenaya hassleriana HOM05D000124 ORTHO05D000056 9.6e-14 79.7 69 60.9
THA.LOC104801608 Tarenaya hassleriana HOM05D000124 ORTHO05D000056 1.6e-13 79.0 65 64.6
BcaC06g32422 Brassica carinata HOM05D000124 ORTHO05D000056 1.1e-12 76.3 67 61.2
BcaC03g13195 Brassica carinata HOM05D000124 ORTHO05D000056 4.0e-12 74.3 59 67.8
C02p03210 Brassica napus HOM05D000124 ORTHO05D000056 4.0e-12 74.3 59 67.8
BolC2t06284H Brassica oleracea HOM05D000124 ORTHO05D000056 4.0e-12 74.3 59 67.8
Sp6g35290 Schrenkiella parvula HOM05D000124 ORTHO05D000056 1.5e-11 72.4 71 62.0
BcaB05g21606 Brassica carinata HOM05D000124 ORTHO05D000056 2.6e-11 71.6 68 60.3
BcaB05g21608 Brassica carinata HOM05D000124 ORTHO05D000056 2.6e-11 71.6 68 60.3
CARHR205570 Cardamine hirsuta HOM05D000124 ORTHO05D000056 9.9e-11 69.7 70 57.1
Aa31LG11G1840 Aethionema arabicum HOM05D000124 ORTHO05D000056 9.3e-09 63.2 55 54.5
BraA02t04925Z Brassica rapa HOM05D000124 ORTHO05D000056 4.6e-08 60.8 59 62.7


User provided reference genes

Program Settings