Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1010U10020 Arabidopsis lyrata HOM05D005281 ORTHO05D006351 1.5e-41 172.6 96 100.0
AL8G35000 Arabidopsis lyrata HOM05D005281 ORTHO05D006351 2.4e-39 165.2 91 100.0
AT5G58720 Arabidopsis thaliana HOM05D005281 ORTHO05D006351 6.8e-34 147.1 91 89.0
Carub.0008s1934 Capsella rubella HOM05D005281 ORTHO05D006351 1.2e-27 126.3 95 82.1
Sp6g20410 Schrenkiella parvula HOM05D005281 ORTHO05D006351 3.4e-25 118.2 91 76.9
CARHR272630 Cardamine hirsuta HOM05D005281 ORTHO05D006351 2.2e-24 115.5 92 75.0
Thhalv10013268m.g Eutrema salsugineum HOM05D005281 ORTHO05D006351 5.6e-20 100.9 91 70.3
BcaC03g14078 Brassica carinata HOM05D005281 ORTHO05D006351 1.2e-14 83.2 64 76.6
A02p07560 Brassica napus HOM05D005281 ORTHO05D006351 1.3e-13 79.7 65 69.2
BraA02t05834Z Brassica rapa HOM05D005281 ORTHO05D006351 1.7e-13 79.3 65 69.2
THA.LOC104799394 Tarenaya hassleriana HOM05D005281 ORTHO05D006351 3.0e-13 78.6 93 60.2
Aa31LG11G480 Aethionema arabicum HOM05D005281 ORTHO05D006351 1.5e-12 76.3 45 86.7
BcaB05g22447 Brassica carinata HOM05D005281 ORTHO05D006351 5.6e-12 74.3 58 75.9
A03p12060 Brassica napus HOM05D005281 ORTHO05D006351 1.2e-11 73.2 83 56.6
C03p14150 Brassica napus HOM05D005281 ORTHO05D006351 1.2e-11 73.2 86 58.1
BraA03t10518Z Brassica rapa HOM05D005281 ORTHO05D006351 1.2e-11 73.2 73 61.6
BolC3t13861H Brassica oleracea HOM05D005281 ORTHO05D006351 2.8e-11 72.0 86 57.0
C02p13130 Brassica napus HOM05D005281 ORTHO05D006351 3.6e-11 71.6 55 72.7
BolC2t07431H Brassica oleracea HOM05D005281 ORTHO05D006351 3.6e-11 71.6 55 72.7
Sopen06g002070 Solanum pennellii HOM05D005281 ORTHO05D006351 6.4e-08 60.8 91 44.0
PGSC0003DMG400004159 Solanum tuberosum HOM05D005281 ORTHO05D006351 2.4e-07 58.9 91 41.8
Gohir.D07G108000 Gossypium hirsutum HOM05D005281 ORTHO05D006351 5.4e-07 57.8 83 47.0
Cc01_g14190 Coffea canephora HOM05D005281 ORTHO05D006351 1.6e-06 56.2 42 66.7
BcaB01g04640 Brassica carinata HOM05D005281 ORTHO05D006351 2.1e-06 55.8 34 76.5
Lj1C137G10 Lonicera japonica HOM05D005281 ORTHO05D006351 2.7e-06 55.5 86 48.8
Gorai.001G116100 Gossypium raimondii HOM05D005281 ORTHO05D006351 3.5e-06 55.1 83 44.6
Gohir.A07G104200 Gossypium hirsutum HOM05D005281 ORTHO05D006351 7.8e-06 53.9 91 40.7


User provided reference genes

Program Settings