Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p33580 Brassica napus HOM05D004288 ORTHO05D004997 5.3e-41 170.6 89 100.0
BraA10t45389Z Brassica rapa HOM05D004288 ORTHO05D004997 5.3e-41 170.6 89 100.0
BolC9t60183H Brassica oleracea HOM05D004288 ORTHO05D004997 3.8e-31 137.9 89 86.5
BcaNung02758 Brassica carinata HOM05D004288 ORTHO05D004997 2.3e-28 128.6 89 83.1
C09p74500 Brassica napus HOM05D004288 ORTHO05D004997 4.0e-28 127.9 90 83.3
BcaNung04465 Brassica carinata HOM05D004288 ORTHO05D004997 2.9e-23 111.7 79 77.2
BcaNung06280 Brassica carinata HOM05D004288 ORTHO05D004997 2.9e-23 111.7 79 77.2
BcaC03g13064 Brassica carinata HOM05D004288 ORTHO05D004997 6.3e-18 94.0 86 59.3
C02p00310 Brassica napus HOM05D004288 ORTHO05D004997 6.3e-18 94.0 86 59.3
BolC2t06031H Brassica oleracea HOM05D004288 ORTHO05D004997 3.1e-17 91.7 86 58.1
BraA02t04704Z Brassica rapa HOM05D004288 ORTHO05D004997 3.1e-17 91.7 86 57.0
Thhalv10015166m.g Eutrema salsugineum HOM05D004288 ORTHO05D004997 2.0e-16 89.0 86 60.5
AT5G01075 Arabidopsis thaliana HOM05D004288 ORTHO05D004997 3.5e-16 88.2 88 54.5
BcaB05g21897 Brassica carinata HOM05D004288 ORTHO05D004997 4.5e-16 87.8 75 60.0
Sp6g40470 Schrenkiella parvula HOM05D004288 ORTHO05D004997 7.7e-16 87.0 77 61.0
AL6G11150 Arabidopsis lyrata HOM05D004288 ORTHO05D004997 5.0e-15 84.3 77 58.4
Carub.0006s0080 Capsella rubella HOM05D004288 ORTHO05D004997 5.0e-15 84.3 86 57.0
THA.LOC104801605 Tarenaya hassleriana HOM05D004288 ORTHO05D004997 1.4e-09 66.2 88 42.0
CARHR211400 Cardamine hirsuta HOM05D004288 ORTHO05D004997 1.2e-08 63.2 78 46.2
Ciclev10029597m.g Citrus clementina HOM05D004288 ORTHO05D004997 4.5e-08 61.2 66 42.4
Gohir.A06G023200 Gossypium hirsutum HOM05D004288 ORTHO05D004997 5.9e-08 60.8 45 60.0
Gohir.D06G020400 Gossypium hirsutum HOM05D004288 ORTHO05D004997 5.9e-08 60.8 45 60.0
Gorai.010G024900 Gossypium raimondii HOM05D004288 ORTHO05D004997 5.9e-08 60.8 45 60.0
Cpa.g.sc21.102 Carica papaya HOM05D004288 ORTHO05D004997 7.8e-08 60.5 41 73.2
THA.LOC104825767 Tarenaya hassleriana HOM05D004288 ORTHO05D004997 1.0e-07 60.1 49 61.2
TWI12G0116 Tripterygium wilfordii HOM05D004288 ORTHO05D004997 2.9e-07 58.5 59 49.2
Nitab4.5_0000934g0110 Nicotiana tabacum HOM05D004288 ORTHO05D004997 6.6e-07 57.4 38 65.8
DCAR_012811 Daucus carota HOM05D004288 ORTHO05D004997 8.6e-07 57.0 51 52.9
Manes.18G045000 Manihot esculenta HOM05D004288 ORTHO05D004997 8.6e-07 57.0 40 60.0
Phvul.001G026400 Phaseolus vulgaris HOM05D004288 ORTHO05D004997 1.1e-06 56.6 52 50.0
Nitab4.5_0011511g0010 Nicotiana tabacum HOM05D004288 ORTHO05D004997 1.5e-06 56.2 41 61.0
Psat6g016040 Pisum sativum HOM05D004288 ORTHO05D004997 1.5e-06 56.2 75 38.7
Potri.014G017600 Populus trichocarpa HOM05D004288 ORTHO05D004997 1.5e-06 56.2 47 53.2
CAN.G107.3 Capsicum annuum HOM05D004288 ORTHO05D004997 1.9e-06 55.8 39 66.7
Solyc12g088410.3 Solanum lycopersicum HOM05D004288 ORTHO05D004997 1.9e-06 55.8 41 63.4
Sopen12g030390 Solanum pennellii HOM05D004288 ORTHO05D004997 1.9e-06 55.8 41 63.4
Phvul.001G026500 Phaseolus vulgaris HOM05D004288 ORTHO05D004997 2.5e-06 55.5 66 51.5
Sc02g0007800 Simmondsia chinensis HOM05D003189 ORTHO05D003449 2.5e-06 55.5 49 46.9
PGSC0003DMG401011559 Solanum tuberosum HOM05D004288 ORTHO05D004997 2.5e-06 55.5 41 61.0
SGA_v2.0_scaffold14G06935 Striga asiatica HOM05D004288 ORTHO05D004997 2.5e-06 55.5 63 42.9
Migut.C00495 Erythranthe guttata HOM05D004288 ORTHO05D004997 3.3e-06 55.1 52 53.8
Ciclev10002881m.g Citrus clementina HOM05D004288 ORTHO05D004997 4.3e-06 54.7 41 58.5
Nitab4.5_0000569g0070 Nicotiana tabacum HOM05D004288 ORTHO05D004997 4.3e-06 54.7 40 62.5
TAR376G0993 Trochodendron aralioides HOM05D004288 ORTHO05D004997 5.6e-06 54.3 40 57.5
Solyc04g078010.4 Solanum lycopersicum HOM05D004288 ORTHO05D004997 7.3e-06 53.9 40 60.0
Sopen04g031610 Solanum pennellii HOM05D004288 ORTHO05D004997 7.3e-06 53.9 40 60.0
PGSC0003DMG400021529 Solanum tuberosum HOM05D004288 ORTHO05D004997 7.3e-06 53.9 40 60.0
CsaV3_4G034910 Cucumis sativus L. HOM05D004288 ORTHO05D003449 9.5e-06 53.5 69 42.0
PSO541G1266 Papaver somniferum HOM05D004288 ORTHO05D004997 9.5e-06 53.5 51 45.1
Sed0012219 Sechium edule HOM05D004288 ORTHO05D004997 9.5e-06 53.5 55 41.8
Hund14391 Selenicereus undatus HOM05D004288 ORTHO05D004997 9.5e-06 53.5 47 51.1


User provided reference genes

Program Settings