Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p32390 Brassica napus HOM05D003745 ORTHO05D004215 2.1e-49 198.7 100 100.0
BraA10t45279Z Brassica rapa HOM05D003745 ORTHO05D004215 2.1e-49 198.7 100 100.0
C09p73210 Brassica napus HOM05D003745 ORTHO05D004215 6.6e-48 193.7 100 97.0
BolC9t60056H Brassica oleracea HOM05D003745 ORTHO05D004215 6.6e-48 193.7 100 97.0
Thhalv10015130m.g Eutrema salsugineum HOM05D003745 ORTHO05D004215 2.8e-38 161.8 100 82.0
Sp6g39010 Schrenkiella parvula HOM05D003745 ORTHO05D004215 2.1e-33 145.6 100 77.0
AL6G13230 Arabidopsis lyrata HOM05D003745 ORTHO05D004215 1.8e-29 132.5 101 73.3
Carub.0006s0262 Capsella rubella HOM05D003745 ORTHO05D004215 7.6e-28 127.1 103 69.9
CARHR209590 Cardamine hirsuta HOM05D003745 ORTHO05D004215 2.0e-20 102.4 66 74.2
Thecc.05G081300 Theobroma cacao HOM05D003745 ORTHO05D004215 2.6e-12 75.5 100 45.0
Manes.09G058940 Manihot esculenta HOM05D003745 ORTHO05D004215 1.1e-10 70.1 100 45.0
Peaxi162Scf00433g00025 Petunia axillaris HOM05D003745 ORTHO05D004215 1.1e-10 70.1 101 41.6
THA.LOC104799535 Tarenaya hassleriana HOM05D003745 ORTHO05D004215 7.1e-10 67.4 93 38.7
PGSC0003DMG400002682 Solanum tuberosum HOM05D003745 ORTHO05D004215 1.6e-09 66.2 102 42.2
Duzib093G0672 Durio zibethinus HOM05D003745 ORTHO05D004215 2.1e-09 65.9 100 45.0
Atru.chr8.1631 Acer truncatum HOM05D003745 ORTHO05D004215 2.7e-09 65.5 101 43.6
Duzib106G0076 Durio zibethinus HOM05D003745 ORTHO05D004215 2.7e-09 65.5 51 60.8
PSO063G0377 Papaver somniferum HOM05D003745 ORTHO05D004215 2.7e-09 65.5 96 44.8
Duzib128G0603 Durio zibethinus HOM05D003745 ORTHO05D004215 6.0e-09 64.3 100 43.0
Gohir.D01G198200 Gossypium hirsutum HOM05D003745 ORTHO05D004215 6.0e-09 64.3 95 44.2
Gohir.D01G198300 Gossypium hirsutum HOM05D003745 ORTHO05D004215 6.0e-09 64.3 99 43.4
Glyma.10G066400 Glycine max HOM05D003745 ORTHO05D004215 7.9e-09 63.9 102 39.2
Gorai.002G242400 Gossypium raimondii HOM05D003745 ORTHO05D004215 7.9e-09 63.9 95 44.2
Psat7g007360 Pisum sativum HOM05D003745 ORTHO05D004215 7.9e-09 63.9 94 41.5
Dinv21253 Davidia involucrata HOM05D003745 ORTHO05D004215 1.0e-08 63.5 100 39.0
Nn2g14004 Nelumbo nucifera HOM05D003745 ORTHO05D004215 1.0e-08 63.5 92 42.4
Nitab4.5_0000663g0130 Nicotiana tabacum HOM05D003745 ORTHO05D004215 1.0e-08 63.5 99 37.4
Solyc06g074540.4 Solanum lycopersicum HOM05D003745 ORTHO05D004215 1.0e-08 63.5 92 43.5
Ciclev10003706m.g Citrus clementina HOM05D003745 ORTHO05D004215 1.8e-08 62.8 100 40.0
Ciclev10013197m.g Citrus clementina HOM05D003745 ORTHO05D004215 1.8e-08 62.8 90 44.4
Duzib106G0171 Durio zibethinus HOM05D003745 ORTHO05D004215 1.8e-08 62.8 94 41.5
MD14G1016200 Malus domestica HOM05D003745 ORTHO05D004215 1.8e-08 62.8 52 63.5
Manes.08G021100 Manihot esculenta HOM05D003745 ORTHO05D004215 1.8e-08 62.8 48 60.4
Sopen06g031010 Solanum pennellii HOM05D003745 ORTHO05D004215 1.8e-08 62.8 92 42.4
Actinidia11335 Actinidia chinensis HOM05D003745 ORTHO05D004215 2.3e-08 62.4 92 41.3
GSVIVG01033785001 Vitis vinifera HOM05D003745 ORTHO05D004215 2.3e-08 62.4 94 41.5
Dinv19830 Davidia involucrata HOM05D003745 ORTHO05D004215 3.0e-08 62.0 101 41.6
Eucgr.B03895 Eucalyptus grandis HOM05D003745 ORTHO05D004215 3.0e-08 62.0 89 38.2
MD12G1018200 Malus domestica HOM05D003745 ORTHO05D004215 3.0e-08 62.0 52 61.5
Solyc10g083580.2 Solanum lycopersicum HOM05D003745 ORTHO05D004215 3.0e-08 62.0 91 39.6
arahy.Tifrunner.gnm1.ann1.AP4865 Arachis hypogaea HOM05D003745 ORTHO05D004215 5.1e-08 61.2 95 41.1
arahy.Tifrunner.gnm1.ann1.NCX3KP Arachis hypogaea HOM05D003745 ORTHO05D004215 5.1e-08 61.2 95 41.1
CiPaw.09G008800 Carya illinoinensis HOM05D003745 ORTHO05D004215 5.1e-08 61.2 93 47.3
ECA233G0462 Erigeron canadensis HOM05D003745 ORTHO05D004215 5.1e-08 61.2 98 35.7
Glyma.13G151500 Glycine max HOM05D003745 ORTHO05D004215 5.1e-08 61.2 96 43.8
Gohir.A04G066114 Gossypium hirsutum HOM05D003745 ORTHO05D004215 5.1e-08 61.2 39 66.7
Peaxi162Scf00789g00618 Petunia axillaris HOM05D003745 ORTHO05D004215 5.1e-08 61.2 45 57.8
QL07p040518 Quercus lobata HOM05D003745 ORTHO05D004215 6.7e-08 60.8 89 40.4
PGSC0003DMG400007123 Solanum tuberosum HOM05D003745 ORTHO05D004215 6.7e-08 60.8 94 40.4
Nitab4.5_0006360g0020 Nicotiana tabacum HOM05D003745 ORTHO05D004215 8.7e-08 60.5 100 38.0
PSO339G1716 Papaver somniferum HOM05D003745 ORTHO05D004215 8.7e-08 60.5 104 38.5
TPR.G5649 Trifolium pratense HOM05D003745 ORTHO05D004215 1.1e-07 60.1 95 42.1
Nn6g35042 Nelumbo nucifera HOM05D003745 ORTHO05D004215 1.5e-07 59.7 69 46.4
Cfa010081 Carpinus fangiana HOM05D003745 ORTHO05D004215 1.9e-07 59.3 92 40.2
FAN05G2107 Fragaria x ananassa HOM05D003745 ORTHO05D004215 2.5e-07 58.9 50 58.0
FAN05G2814 Fragaria x ananassa HOM05D003745 ORTHO05D004215 2.5e-07 58.9 50 58.0
Gohir.A01G209100 Gossypium hirsutum HOM05D003745 ORTHO05D004215 2.5e-07 58.9 95 40.0
Gohir.A09G093200 Gossypium hirsutum HOM05D003745 ORTHO05D004215 2.5e-07 58.9 93 43.0
Gohir.D09G093000 Gossypium hirsutum HOM05D003745 ORTHO05D004215 2.5e-07 58.9 93 43.0
Peaxi162Scf00157g00066 Petunia axillaris HOM05D003745 ORTHO05D004215 2.5e-07 58.9 40 62.5
PGSC0003DMG400028173 Solanum tuberosum HOM05D003745 ORTHO05D004215 2.5e-07 58.9 100 36.0
TWI75G0377 Tripterygium wilfordii HOM05D003745 ORTHO05D004215 2.5e-07 58.9 94 42.6
TAR636G1780 Trochodendron aralioides HOM05D003745 ORTHO05D004215 2.5e-07 58.9 38 71.1
Cpa.g.sc5.75 Carica papaya HOM05D003745 ORTHO05D004215 3.3e-07 58.5 38 71.1
Lalb_Chr02g0155181 Lupinus albus HOM05D003745 ORTHO05D004215 3.3e-07 58.5 96 42.7
Medtr1g061120 Medicago truncatula HOM05D003745 ORTHO05D004215 3.3e-07 58.5 97 39.2
CiPaw.14G103500 Carya illinoinensis HOM05D003745 ORTHO05D004215 4.3e-07 58.2 93 40.9
Eucgr.A01541 Eucalyptus grandis HOM05D003745 ORTHO05D004215 4.3e-07 58.2 47 66.0
FvH4_6g17920 Fragaria vesca HOM05D003745 ORTHO05D004215 4.3e-07 58.2 53 56.6
FAN14G5394 Fragaria x ananassa HOM05D003745 ORTHO05D004215 4.3e-07 58.2 53 56.6
Peaxi162Scf00110g02023 Petunia axillaris HOM05D003745 ORTHO05D004215 4.3e-07 58.2 94 33.0
RcHm_v2.0_Chr3g0472171 Rosa chinensis HOM05D003745 ORTHO05D004215 4.3e-07 58.2 37 73.0
Actinidia07207 Actinidia chinensis HOM05D003745 ORTHO05D004215 5.7e-07 57.8 100 38.0
CiPaw.10G005500 Carya illinoinensis HOM05D003745 ORTHO05D004215 5.7e-07 57.8 93 39.8
CiPaw.13G141100 Carya illinoinensis HOM05D003745 ORTHO05D004215 5.7e-07 57.8 92 39.1
FAN02G0871 Fragaria x ananassa HOM05D003745 ORTHO05D004215 5.7e-07 57.8 37 70.3
Sopen10g033060 Solanum pennellii HOM05D003745 ORTHO05D004215 5.7e-07 57.8 91 37.4
TAR633G1338 Trochodendron aralioides HOM05D003745 ORTHO05D004215 5.7e-07 57.8 38 68.4
CAN.G919.7 Capsicum annuum HOM05D003745 ORTHO05D004215 7.4e-07 57.4 93 39.8
FAN11G3796 Fragaria x ananassa HOM05D003745 ORTHO05D004215 7.4e-07 57.4 43 62.8
FAN21G0140 Fragaria x ananassa HOM05D003745 ORTHO05D004215 7.4e-07 57.4 43 62.8
Nitab4.5_0000132g0150 Nicotiana tabacum HOM05D003745 ORTHO05D004215 7.4e-07 57.4 42 57.1
Phvul.007G223101 Phaseolus vulgaris HOM05D003745 ORTHO05D004215 7.4e-07 57.4 102 38.2
Sopen09g003840 Solanum pennellii HOM05D003745 ORTHO05D004215 7.4e-07 57.4 86 41.9
GSVIVG01031398001 Vitis vinifera HOM05D003745 ORTHO05D004215 7.4e-07 57.4 37 73.0
Atru.chr3.3378 Acer truncatum HOM05D003745 ORTHO05D004215 9.6e-07 57.0 42 61.9
C01p34270 Brassica napus HOM05D003745 ORTHO05D004215 9.6e-07 57.0 33 75.8
BolC1t03395H Brassica oleracea HOM05D003745 ORTHO05D004215 9.6e-07 57.0 33 75.8
Carub.0005s1042 Capsella rubella HOM05D003745 ORTHO05D004215 9.6e-07 57.0 36 66.7
Carub.0015s0003 Capsella rubella HOM05D003745 ORTHO05D004215 9.6e-07 57.0 36 66.7
vmacro07360 Vaccinium macrocarpon HOM05D003745 ORTHO05D004215 9.6e-07 57.0 94 40.4
AT3G44735 Arabidopsis thaliana HOM05D003745 ORTHO05D004215 1.3e-06 56.6 86 37.2
CANSAT80G1673 Cannabis sativa HOM05D003745 ORTHO05D004215 1.3e-06 56.6 103 37.9
Haze_23447 Corylus avellana HOM05D003745 ORTHO05D004215 1.3e-06 56.6 51 49.0
Prupe.7G116900 Prunus persica HOM05D003745 ORTHO05D004215 1.3e-06 56.6 37 67.6
Sc12g0004160 Simmondsia chinensis HOM05D003745 ORTHO05D004215 1.3e-06 56.6 99 38.4
TWI77G0164 Tripterygium wilfordii HOM05D003745 ORTHO05D004215 1.3e-06 56.6 100 38.0
Actinidia24179 Actinidia chinensis HOM05D003745 ORTHO05D004215 1.6e-06 56.2 55 52.7
AL5G22960 Arabidopsis lyrata HOM05D003745 ORTHO05D004215 1.6e-06 56.2 89 38.2
C09p51010 Brassica napus HOM05D003745 ORTHO05D004215 1.6e-06 56.2 26 100.0
CARHR151430 Cardamine hirsuta HOM05D003745 ORTHO05D004215 1.6e-06 56.2 33 72.7
FAN16G1639 Fragaria x ananassa HOM05D003745 ORTHO05D004215 1.6e-06 56.2 43 60.5
QL01p013692 Quercus lobata HOM05D003745 ORTHO05D004215 1.6e-06 56.2 95 35.8
CSS0050359 Camellia sinensis var. sinensis HOM05D003745 ORTHO05D004215 2.1e-06 55.8 93 35.5
Manes.11G157100 Manihot esculenta HOM05D003745 ORTHO05D004215 2.1e-06 55.8 93 40.9
SalBow6G4256 Salvia bowleyana HOM05D003745 ORTHO05D004215 2.1e-06 55.8 100 36.0
CSS0006810 Camellia sinensis var. sinensis HOM05D003745 ORTHO05D004215 2.8e-06 55.5 40 65.0
CSS0049961 Camellia sinensis var. sinensis HOM05D003745 ORTHO05D004215 2.8e-06 55.5 40 65.0
Thhalv10002908m.g Eutrema salsugineum HOM05D003745 ORTHO05D004215 2.8e-06 55.5 33 72.7
FvH4_3g29900 Fragaria vesca HOM05D003745 ORTHO05D004215 2.8e-06 55.5 43 60.5
Gorai.006G109700 Gossypium raimondii HOM05D003745 ORTHO05D004215 2.8e-06 55.5 93 40.9
Cc06_g05290 Coffea canephora HOM05D003745 ORTHO05D004215 3.7e-06 55.1 52 53.8
FAN09G1254 Fragaria x ananassa HOM05D003745 ORTHO05D004215 3.7e-06 55.1 51 51.0
Gorai.002G242500 Gossypium raimondii HOM05D003745 ORTHO05D004215 3.7e-06 55.1 100 40.0
Lsat_1_v5_gn_6_41120 Lactuca sativa HOM05D003745 ORTHO05D004215 3.7e-06 55.1 40 62.5
MD11G1157500 Malus domestica HOM05D003745 ORTHO05D004215 3.7e-06 55.1 41 63.4
Nitab4.5_0010833g0010 Nicotiana tabacum HOM05D003745 ORTHO05D004215 3.7e-06 55.1 100 39.0
Sp5g16440 Schrenkiella parvula HOM05D003745 ORTHO05D004215 3.7e-06 55.1 33 69.7
CANSAT54G1542 Cannabis sativa HOM05D003745 ORTHO05D004215 4.8e-06 54.7 44 63.6
Os12g0147800 Oryza sativa ssp. japonica HOM05D021295 ORTHO05D023052 4.8e-06 54.7 55 52.7
DCAR_006146 Daucus carota HOM05D003745 ORTHO05D004215 6.2e-06 54.3 43 58.1
Gohir.A01G209200 Gossypium hirsutum HOM05D003745 ORTHO05D004215 6.2e-06 54.3 99 39.4
Rhsim03G0081200 Rhododendron simsii HOM05D003745 ORTHO05D004215 6.2e-06 54.3 91 38.5
RcHm_v2.0_Chr5g0055241 Rosa chinensis HOM05D003745 ORTHO05D004215 6.2e-06 54.3 41 61.0
Cc01_g09790 Coffea canephora HOM05D003745 ORTHO05D004215 8.2e-06 53.9 93 37.6


User provided reference genes

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