Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p32040 Brassica napus HOM05D008152 ORTHO05D010231 1.0e-33 146.0 66 100.0
BolC9t60014H Brassica oleracea HOM05D008152 ORTHO05D010231 5.2e-33 143.7 66 98.5
C09p72760 Brassica napus HOM05D008152 ORTHO05D010231 1.5e-32 142.1 66 98.5
BraA10t45248Z Brassica rapa HOM05D008152 ORTHO05D010231 2.0e-32 141.7 66 97.0
BcaC06g32113 Brassica carinata HOM05D008152 ORTHO05D010231 8.0e-26 119.8 67 83.6
BraA02t04797Z Brassica rapa HOM05D008152 ORTHO05D010231 2.6e-24 114.8 66 78.8
BolC2t06131H Brassica oleracea HOM05D008152 ORTHO05D010231 1.1e-22 109.4 70 78.6
C03p01870 Brassica napus HOM05D008152 ORTHO05D010231 1.6e-21 105.5 68 77.9
CARHR209180 Cardamine hirsuta HOM05D008152 ORTHO05D010231 2.0e-21 105.1 60 81.7
BcaB01g05765 Brassica carinata HOM05D008152 ORTHO05D010231 2.7e-21 104.8 67 77.6
Carub.0006s0304 Capsella rubella HOM05D008152 ORTHO05D010231 1.0e-20 102.8 66 78.8
AL6G13710 Arabidopsis lyrata HOM05D008152 ORTHO05D010231 2.3e-20 101.7 65 76.9
A03p01520 Brassica napus HOM05D008152 ORTHO05D010231 2.3e-20 101.7 68 77.9
BraA03t09529Z Brassica rapa HOM05D008152 ORTHO05D010231 2.3e-20 101.7 68 77.9
Thhalv10015225m.g Eutrema salsugineum HOM05D008152 ORTHO05D010231 1.5e-19 99.0 66 74.2
Aa31LG1G21240 Aethionema arabicum HOM05D008152 ORTHO05D010231 2.1e-18 95.1 69 66.7
BolC3t12740H Brassica oleracea HOM05D008152 ORTHO05D010231 8.0e-18 93.2 62 75.8
BcaB01g05882 Brassica carinata HOM05D008152 ORTHO05D010231 3.0e-17 91.3 63 73.0
Sp6g38660 Schrenkiella parvula HOM05D008152 ORTHO05D010231 6.8e-17 90.1 52 84.6
THA.LOC104816407 Tarenaya hassleriana HOM05D008152 ORTHO05D010231 2.4e-14 81.6 67 65.7
C02p01660 Brassica napus HOM05D008152 ORTHO05D010231 2.3e-12 75.1 54 74.1
BcaB05g21787 Brassica carinata HOM05D008152 ORTHO05D010231 1.9e-11 72.0 56 71.4
COL.COLO4_33936 Corchorus olitorius HOM05D008152 ORTHO05D010231 1.9e-11 72.0 58 60.3
Ciclev10006402m.g Citrus clementina HOM05D008152 ORTHO05D010231 2.5e-11 71.6 67 58.2
Duzib128G1278 Durio zibethinus HOM05D008152 ORTHO05D010231 2.5e-11 71.6 60 60.0
FvH4_6g25100 Fragaria vesca HOM05D008152 ORTHO05D010231 3.3e-11 71.2 68 55.9
FAN05G4131 Fragaria x ananassa HOM05D008152 ORTHO05D010231 5.6e-11 70.5 60 58.3
Migut.K00109 Erythranthe guttata HOM05D008152 ORTHO05D010231 7.3e-11 70.1 54 61.1
RcHm_v2.0_Chr2g0124931 Rosa chinensis HOM05D008152 ORTHO05D010231 9.5e-11 69.7 66 56.1
Prupe.7G046400 Prunus persica HOM05D008152 ORTHO05D010231 1.6e-10 68.9 61 55.7
Nn2g14938 Nelumbo nucifera HOM05D008152 ORTHO05D010231 2.1e-10 68.6 53 64.2
BcaC03g12967 Brassica carinata HOM05D003180 ORTHO05D014840 8.0e-10 66.6 58 67.2
CAN.G1237.35 Capsicum annuum HOM05D008152 ORTHO05D010231 1.4e-09 65.9 55 63.6
Medtr7g090035 Medicago truncatula HOM05D008152 ORTHO05D010231 1.4e-09 65.9 52 59.6
Gorai.006G133500 Gossypium raimondii HOM05D008152 ORTHO05D010231 1.8e-09 65.5 60 55.0
Gohir.D09G115470 Gossypium hirsutum HOM05D008152 ORTHO05D010231 2.3e-09 65.1 60 55.0
Oeu013028.1 Olea europaea HOM05D008152 ORTHO05D010231 2.3e-09 65.1 54 55.6
FAN09G1661 Fragaria x ananassa HOM05D008152 ORTHO05D010231 3.1e-09 64.7 51 60.8
Lalb_Chr14g0365951 Lupinus albus HOM05D008152 ORTHO05D010231 3.1e-09 64.7 52 61.5
MD00G1073900 Malus domestica HOM05D008152 ORTHO05D010231 3.1e-09 64.7 53 64.2
MD12G1091200 Malus domestica HOM05D008152 ORTHO05D010231 3.1e-09 64.7 53 64.2
Nn7g36510 Nelumbo nucifera HOM05D008152 ORTHO05D010231 3.1e-09 64.7 60 56.7
Hund19113 Selenicereus undatus HOM05D008152 ORTHO05D010231 3.1e-09 64.7 63 49.2
CiPaw.09G044200 Carya illinoinensis HOM05D008152 ORTHO05D010231 6.8e-09 63.5 58 55.2
PGR031G3912 Punica granatum HOM05D008152 ORTHO05D010231 6.8e-09 63.5 51 58.8
SalBow6G4146 Salvia bowleyana HOM05D008152 ORTHO05D010231 6.8e-09 63.5 49 57.1
Glyma.03G128700 Glycine max HOM05D008152 ORTHO05D010231 8.9e-09 63.2 52 61.5
CSS0018961 Camellia sinensis var. sinensis HOM05D008152 ORTHO05D010231 1.2e-08 62.8 58 50.0
GSVIVG01033573001 Vitis vinifera HOM05D008152 ORTHO05D010231 1.2e-08 62.8 53 62.3
Manes.08G056600 Manihot esculenta HOM05D008152 ORTHO05D010231 1.5e-08 62.4 64 56.2
Nitab4.5_0010323g0030 Nicotiana tabacum HOM05D008152 ORTHO05D010231 1.5e-08 62.4 52 61.5
Glyma.19G131100 Glycine max HOM05D008152 ORTHO05D010231 3.4e-08 61.2 51 56.9
Potri.006G043300 Populus trichocarpa HOM05D008152 ORTHO05D010231 3.4e-08 61.2 51 60.8
Solyc10g084060.2 Solanum lycopersicum HOM05D008152 ORTHO05D010231 5.8e-08 60.5 54 51.9
Psat3g078320 Pisum sativum HOM05D008152 ORTHO05D010231 9.8e-08 59.7 49 53.1
AT5G04080 Arabidopsis thaliana HOM05D008152 ORTHO05D010231 2.2e-07 58.5 48 70.8
Manes.11G003500 Manihot esculenta HOM05D008152 ORTHO05D010231 2.9e-07 58.2 46 56.5
Sc13g0001370 Simmondsia chinensis HOM05D008152 ORTHO05D010231 4.9e-07 57.4 53 52.8
Sed0008507 Sechium edule HOM05D008152 ORTHO05D010231 6.4e-07 57.0 35 65.7
Ciclev10033235m.g Citrus clementina HOM05D008152 ORTHO05D010231 1.4e-06 55.8 28 82.1
Lj1g0004562 Lotus japonicus HOM05D008152 ORTHO05D010231 1.9e-06 55.5 64 51.6
Phvul.001G124150 Phaseolus vulgaris HOM05D008152 ORTHO05D010231 1.9e-06 55.5 53 54.7
Phvul.001G124600 Phaseolus vulgaris HOM05D008152 ORTHO05D010231 1.9e-06 55.5 53 54.7
Eucgr.K01615 Eucalyptus grandis HOM05D008152 ORTHO05D010231 2.4e-06 55.1 55 56.4
ClCG05G020750 Citrullus lanatus HOM05D008152 ORTHO05D010231 9.2e-06 53.1 42 54.8
Sed0007854 Sechium edule HOM05D008152 ORTHO05D010231 9.2e-06 53.1 58 46.6
SEGI_34450 Sequoiadendron giganteum HOM05D037356 ORTHO05D010231 9.2e-06 53.1 63 36.5


User provided reference genes

Program Settings