Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p31760 Brassica napus HOM05D003012 ORTHO05D002833 3.1e-80 301.6 140 100.0
BraA10t45221Z Brassica rapa HOM05D003012 ORTHO05D002833 1.0e-67 260.0 118 100.0
C09p72440 Brassica napus HOM05D003012 ORTHO05D002833 7.3e-61 237.3 125 88.8
BolC9t59987H Brassica oleracea HOM05D003012 ORTHO05D002833 8.1e-52 207.2 117 82.1
A10p31740 Brassica napus HOM05D003012 ORTHO05D002833 1.1e-48 196.8 116 81.0
A10p31770 Brassica napus HOM05D003012 ORTHO05D002833 1.1e-32 143.7 118 58.5
BraA10t45222Z Brassica rapa HOM05D003012 ORTHO05D002833 1.1e-32 143.7 118 58.5
BolC9t59989H Brassica oleracea HOM05D003012 ORTHO05D002833 1.4e-32 143.3 118 58.5
BcaC06g32140 Brassica carinata HOM05D003012 ORTHO05D002833 3.0e-30 135.6 119 58.0
BcaC06g32139 Brassica carinata HOM05D003012 ORTHO05D002833 8.7e-30 134.0 119 57.1
C09p72460 Brassica napus HOM05D003012 ORTHO05D002833 1.5e-29 133.3 130 52.3
Thhalv10015869m.g Eutrema salsugineum HOM05D003012 ORTHO05D002833 2.8e-28 129.0 118 51.7
BcaB04g19638 Brassica carinata HOM05D003012 ORTHO05D002833 1.4e-27 126.7 131 51.9
BolC9t59988H Brassica oleracea HOM05D003012 ORTHO05D002833 3.4e-26 122.1 128 53.1
C09p72450 Brassica napus HOM05D003012 ORTHO05D002833 4.6e-23 111.7 128 49.2
AT5G04350 Arabidopsis thaliana HOM05D003012 ORTHO05D002833 8.7e-22 107.5 109 49.5
A10p31750 Brassica napus HOM05D003012 ORTHO05D002833 1.1e-21 107.1 128 50.0
BraA10t45220Z Brassica rapa HOM05D003012 ORTHO05D002833 1.1e-21 107.1 128 50.0
BcaC06g32138 Brassica carinata HOM05D003012 ORTHO05D002833 2.6e-18 95.9 67 61.2
Carub.0006s0330 Capsella rubella HOM05D003012 ORTHO05D002833 2.6e-18 95.9 103 47.6
Aa31LG11G5250 Aethionema arabicum HOM05D013273 ORTHO05D002833 1.5e-13 80.1 124 39.5
Sp6g38380 Schrenkiella parvula HOM05D003012 ORTHO05D002833 1.5e-13 80.1 80 52.5
A03p01640 Brassica napus HOM05D000149 ORTHO05D000076 2.8e-12 75.9 113 40.7
BraA03t09539Z Brassica rapa HOM05D000149 ORTHO05D000076 2.8e-12 75.9 113 40.7
BcaB01g05894 Brassica carinata HOM05D000149 ORTHO05D000076 6.3e-12 74.7 113 39.8
C03p02010 Brassica napus HOM05D003012 ORTHO05D002833 6.3e-12 74.7 113 39.8
BolC3t12754H Brassica oleracea HOM05D000149 ORTHO05D000076 6.3e-12 74.7 113 39.8
BcaB01g05892 Brassica carinata HOM05D003012 ORTHO05D002833 8.2e-12 74.3 117 38.5
A03p01630 Brassica napus HOM05D003012 ORTHO05D002833 8.2e-12 74.3 117 38.5
C03p01980 Brassica napus HOM05D003012 ORTHO05D002833 8.2e-12 74.3 117 38.5
BolC3t12752H Brassica oleracea HOM05D003012 ORTHO05D002833 8.2e-12 74.3 117 38.5
BraA03t09538Z Brassica rapa HOM05D003012 ORTHO05D002833 8.2e-12 74.3 117 38.5
THA.LOC104816675 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 3.1e-11 72.4 109 37.6
THA.LOC104816681 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 2.6e-10 69.3 111 36.9
CARHR208940 Cardamine hirsuta HOM05D003012 ORTHO05D002833 3.4e-10 68.9 114 36.0
BcaNung05795 Brassica carinata HOM05D003012 ORTHO05D002833 4.5e-10 68.6 116 37.1
CARHR147970 Cardamine hirsuta HOM05D008305 ORTHO05D002833 1.0e-09 67.4 113 33.6
AL5G17120 Arabidopsis lyrata HOM05D008305 ORTHO05D010625 1.9e-08 63.2 111 33.3
THA.LOC104816435 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 2.5e-08 62.8 114 30.7
BcaNung05794 Brassica carinata HOM05D000149 ORTHO05D000076 3.2e-08 62.4 107 37.4
Carub.0007s3550 Capsella rubella HOM05D008305 ORTHO05D010625 1.2e-07 60.5 114 34.2
AL6G13980 Arabidopsis lyrata HOM05D003012 ORTHO05D002833 2.7e-07 59.3 111 33.3
Aa31LG2G5710 Aethionema arabicum HOM05D008305 ORTHO05D010625 3.6e-07 58.9 87 35.6
A06p47670 Brassica napus HOM05D004904 ORTHO05D002833 3.6e-07 58.9 112 32.1
BraA06t27634Z Brassica rapa HOM05D004904 ORTHO05D002833 3.6e-07 58.9 112 32.1
Carub.0007s3551 Capsella rubella HOM05D008305 ORTHO05D010625 4.6e-07 58.5 113 31.0
Carub.0007s1156 Capsella rubella HOM05D008344 ORTHO05D011034 1.0e-06 57.4 118 30.5
AT3G26880 Arabidopsis thaliana HOM05D003012 ORTHO05D002833 1.8e-06 56.6 113 29.2
CARHR147930 Cardamine hirsuta HOM05D008305 ORTHO05D010625 2.3e-06 56.2 99 37.4
THA.LOC104816678 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 3.0e-06 55.8 90 33.3
Carub.0003s3531 Capsella rubella HOM05D008344 ORTHO05D011034 3.9e-06 55.5 122 36.1
Carub.0007s3747 Capsella rubella HOM05D003012 ORTHO05D002833 5.1e-06 55.1 126 32.5
Carub.0005s0497 Capsella rubella HOM05D008305 ORTHO05D010625 8.7e-06 54.3 113 31.0


User provided reference genes

Program Settings