Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 4.5e-285 983.8 459 100.0
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 4.7e-282 973.8 459 98.9
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 4.7e-282 973.8 459 98.9
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 2.0e-280 968.4 459 98.3
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 1.8e-273 945.3 459 95.6
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 2.4e-270 934.9 459 94.8
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 7.0e-270 933.3 459 94.8
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 2.7e-269 931.4 459 94.1
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 3.5e-269 931.0 459 94.6
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 7.7e-269 929.9 459 94.1
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 2.8e-263 911.4 486 87.7
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 4.9e-263 910.6 460 89.3
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 7.0e-254 880.2 459 87.4
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 5.9e-253 877.1 459 86.7
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 6.6e-252 873.6 459 85.6
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 1.4e-249 865.9 459 85.6
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 2.3e-249 865.1 459 84.3
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 4.0e-249 864.4 459 85.2
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 6.8e-249 863.6 475 82.9
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 1.5e-248 862.4 459 84.5
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 4.4e-248 860.9 459 84.7
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 4.9e-247 857.4 459 84.3
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 1.4e-246 855.9 460 84.1
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 1.9e-246 855.5 459 83.2
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 3.2e-246 854.7 461 83.9
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 3.2e-246 854.7 460 85.0
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 3.2e-246 854.7 461 85.0
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 1.6e-245 852.4 460 83.7
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 4.6e-245 850.9 461 84.8
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 1.0e-244 849.7 459 83.7
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 3.0e-244 848.2 459 82.8
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 5.0e-244 847.4 459 83.2
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 6.6e-244 847.0 461 84.6
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 4.3e-243 844.3 459 83.0
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 5.6e-243 844.0 461 83.3
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 7.3e-243 843.6 460 83.3
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 2.1e-242 842.0 459 82.6
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 2.8e-242 841.6 459 82.4
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 3.6e-242 841.3 459 82.8
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 4.7e-242 840.9 459 82.4
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 1.1e-241 839.7 459 82.1
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 1.8e-241 839.0 461 82.6
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 1.5e-240 835.9 481 79.8
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 3.4e-240 834.7 459 82.4
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 4.4e-240 834.3 460 82.6
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 4.4e-240 834.3 460 82.6
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 1.7e-239 832.4 459 81.9
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 1.7e-239 832.4 460 82.0
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 3.7e-239 831.2 460 82.6
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 1.9e-238 828.9 460 82.4
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 5.4e-238 827.4 460 80.2
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 9.2e-238 826.6 459 82.1
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 1.2e-237 826.2 461 80.7
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 1.6e-237 825.9 460 80.9
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 3.5e-237 824.7 459 81.7
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 1.7e-236 822.4 458 81.4
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 2.3e-236 822.0 459 81.3
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 1.1e-235 819.7 462 81.0
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 5.6e-235 817.4 460 80.4
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 7.3e-235 817.0 461 80.7
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 1.6e-234 815.8 459 81.3
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 2.1e-234 815.5 460 80.4
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 2.3e-233 812.0 460 80.0
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 1.5e-232 809.3 455 80.4
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 1.7e-231 805.8 459 80.2
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 9.2e-230 800.0 459 79.3
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 2.1e-229 798.9 463 78.4
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 7.8e-229 797.0 460 78.7
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 8.6e-228 793.5 443 80.6
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 9.6e-227 790.0 459 77.8
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 1.6e-226 789.3 460 77.8
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 8.9e-225 783.5 459 78.4
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 5.8e-224 780.8 459 77.8
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 9.9e-224 780.0 458 77.1
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 2.1e-221 772.3 459 77.3
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 3.0e-220 768.5 460 77.2
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 6.6e-220 767.3 459 76.5
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 1.1e-219 766.5 497 72.2
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 1.5e-219 766.1 460 77.2
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 1.3e-212 743.0 460 75.0
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 1.5e-211 739.6 464 72.8
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 4.8e-210 734.6 460 72.2
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 9.3e-206 720.3 498 68.7
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 1.6e-202 709.5 459 71.9
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 3.2e-190 668.7 393 77.4
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 1.2e-189 666.8 458 68.8
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 8.7e-188 660.6 450 65.8
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 7.4e-187 657.5 450 66.0
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 3.1e-185 652.1 454 65.4
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 9.4e-182 640.6 340 85.0
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.7e-181 639.0 338 85.5
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 7.9e-181 637.5 338 86.4
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.0e-180 637.1 338 85.5
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 2.8e-178 629.0 456 62.9
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 5.3e-177 624.8 338 85.2
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 3.8e-175 618.6 341 83.3
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 3.8e-175 618.6 341 83.3
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 6.1e-173 611.3 462 60.0
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 1.3e-170 603.6 323 84.2
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 2.6e-168 595.9 337 80.7
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.5e-168 595.5 296 90.5
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 1.7e-167 593.2 338 80.2
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 3.0e-164 582.4 461 57.0
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 1.1e-161 573.9 337 78.6
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 1.0e-148 530.8 295 82.7
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 1.4e-145 520.4 291 81.4
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.8e-145 520.0 290 81.7
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 2.4e-145 519.6 308 79.5
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 2.0e-144 516.5 337 73.3
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 6.8e-140 501.5 277 81.2
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 5.0e-135 485.3 338 63.3
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 8.3e-130 468.0 281 76.2
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 1.3e-106 391.0 449 41.9
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 2.3e-95 353.6 486 37.0
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 1.0e-66 258.5 164 70.1
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 4.2e-57 226.5 110 91.8
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 4.2e-57 226.5 110 91.8
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 9.4e-57 225.3 110 90.9
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 2.8e-53 213.8 185 57.8
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 4.0e-39 166.8 98 79.6
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 1.1e-15 89.0 40 100.0


User provided reference genes

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