Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p28620 Brassica napus HOM05D009441 ORTHO05D010605 3.3e-80 301.6 146 100.0
C09p68910 Brassica napus HOM05D009441 ORTHO05D010605 1.4e-75 286.2 147 96.6
BraA10t44911Z Brassica rapa HOM05D009441 ORTHO05D010605 4.3e-72 274.6 136 97.1
Sp6g34940 Schrenkiella parvula HOM05D009441 ORTHO05D010605 1.7e-36 156.4 138 58.7
AT5G08005 Arabidopsis thaliana HOM05D009441 ORTHO05D010605 6.7e-25 117.9 136 49.3
AL6G18350 Arabidopsis lyrata HOM05D009441 ORTHO05D010605 2.8e-23 112.5 154 47.4
CARHR205180 Cardamine hirsuta HOM05D009441 ORTHO05D010605 6.3e-23 111.3 135 46.7
Aa31LG3G18530 Aethionema arabicum HOM05D000016 ORTHO05D000487 3.9e-17 92.0 108 42.6
Carub.0006s0689 Capsella rubella HOM05D009441 ORTHO05D010605 2.6e-16 89.4 112 42.0
C07p44810 Brassica napus HOM05D007909 ORTHO05D010605 2.4e-14 82.8 88 43.2
BolC2t12185H Brassica oleracea HOM05D009441 ORTHO05D010605 4.1e-14 82.0 60 55.0
Sp2g24365 Schrenkiella parvula HOM05D007909 ORTHO05D010605 4.1e-14 82.0 87 42.5
BcaB07g34219 Brassica carinata HOM05D007909 ORTHO05D010605 5.3e-14 81.6 103 37.9
C02p61360 Brassica napus HOM05D009441 ORTHO05D010605 1.6e-13 80.1 60 53.3
BraA02t09085Z Brassica rapa HOM05D009441 ORTHO05D010605 1.6e-13 80.1 60 53.3
A03p46770 Brassica napus HOM05D007909 ORTHO05D010605 3.5e-13 79.0 87 41.4
BraA03t13799Z Brassica rapa HOM05D007909 ORTHO05D010605 3.5e-13 79.0 87 41.4
AT5G61110 Arabidopsis thaliana HOM05D009441 ORTHO05D010605 4.5e-13 78.6 130 36.9
BcaC06g33178 Brassica carinata HOM05D007909 ORTHO05D010605 4.5e-13 78.6 87 41.4
A02p41420 Brassica napus HOM05D009441 ORTHO05D010605 4.5e-13 78.6 60 51.7
AL8G37740 Arabidopsis lyrata HOM05D009441 ORTHO05D010605 8.5e-12 74.3 56 51.8
Gohir.A12G182300 Gossypium hirsutum HOM05D004287 ORTHO05D004569 1.1e-11 73.9 100 40.0
A02p41400 Brassica napus HOM05D007909 ORTHO05D010605 1.5e-11 73.6 84 40.5
Medtr3g025330 Medicago truncatula HOM05D001093 ORTHO05D010605 1.5e-11 73.6 50 54.0
Carub.0008s2177 Capsella rubella HOM05D009441 ORTHO05D010605 2.5e-11 72.8 50 58.0
Gohir.D12G185200 Gossypium hirsutum HOM05D004287 ORTHO05D004569 2.5e-11 72.8 100 39.0
Gorai.008G198600 Gossypium raimondii HOM05D004287 ORTHO05D004569 2.5e-11 72.8 100 39.0
TAR264G0006 Trochodendron aralioides HOM05D001093 ORTHO05D000743 2.5e-11 72.8 53 49.1
Thhalv10015590m.g Eutrema salsugineum HOM05D009441 ORTHO05D010605 3.2e-11 72.4 80 45.0
CARHR274790 Cardamine hirsuta HOM05D009441 ORTHO05D010605 7.2e-11 71.2 100 40.0
Duzib084G0418 Durio zibethinus HOM05D000539 ORTHO05D000233 7.2e-11 71.2 53 47.2
AT5G61100 Arabidopsis thaliana HOM05D009441 ORTHO05D010605 9.4e-11 70.9 61 45.9
TPR.G12267 Trifolium pratense HOM05D008195 ORTHO05D010605 9.4e-11 70.9 48 54.2
Dinv22785 Davidia involucrata HOM05D001093 ORTHO05D000743 2.7e-10 69.3 92 37.0
QL10p019356 Quercus lobata HOM05D001093 ORTHO05D010605 2.7e-10 69.3 54 42.6
BcaC03g18076 Brassica carinata HOM05D009441 ORTHO05D010605 3.6e-10 68.9 56 48.2
BolC2t12184H Brassica oleracea HOM05D009441 ORTHO05D010605 3.6e-10 68.9 56 48.2
Duzib205G1796 Durio zibethinus HOM05D001093 ORTHO05D010605 4.7e-10 68.6 96 35.4
MBI19_g34071_MAGBIO Magnolia biondii HOM05D001093 ORTHO05D010605 4.7e-10 68.6 83 39.8
MBI19_g36253_MAGBIO Magnolia biondii HOM05D001093 ORTHO05D010605 4.7e-10 68.6 83 39.8
Psat0s231g0040 Pisum sativum HOM05D001093 ORTHO05D000743 4.7e-10 68.6 57 42.1
Lj1g0000797 Lotus japonicus HOM05D007909 ORTHO05D000743 2.3e-09 66.2 49 44.9
Prupe.5G204000 Prunus persica HOM05D001093 ORTHO05D010605 2.3e-09 66.2 60 46.7
Dinv17406 Davidia involucrata HOM05D001093 ORTHO05D000743 3.0e-09 65.9 113 31.0
CSS0005519 Camellia sinensis var. sinensis HOM05D001093 ORTHO05D000743 5.2e-09 65.1 103 34.0
CsaV3_1G033720 Cucumis sativus L. HOM05D034807 ORTHO05D034786 5.2e-09 65.1 59 42.4
Hund02591 Selenicereus undatus HOM05D001093 ORTHO05D000743 6.7e-09 64.7 124 31.5
arahy.Tifrunner.gnm1.ann1.ER6SHV Arachis hypogaea HOM05D008195 ORTHO05D000743 1.2e-08 63.9 57 42.1
Manes.06G085200 Manihot esculenta HOM05D007909 ORTHO05D010605 1.2e-08 63.9 53 41.5
Haze_07715 Corylus avellana HOM05D008195 ORTHO05D010605 1.5e-08 63.5 128 33.6
Ciclev10020157m.g Citrus clementina HOM05D001093 ORTHO05D010605 2.0e-08 63.2 134 33.6
AL8G37750 Arabidopsis lyrata HOM05D009441 ORTHO05D010605 3.3e-08 62.4 132 31.1
A02p41410 Brassica napus HOM05D009441 ORTHO05D010605 3.3e-08 62.4 56 44.6
Carub.0008s2178 Capsella rubella HOM05D009441 ORTHO05D010605 3.3e-08 62.4 53 45.3
HanXRQChr02g0044731 Helianthus annuus HOM05D001093 ORTHO05D000743 3.3e-08 62.4 70 35.7
Lsat_1_v5_gn_1_13501 Lactuca sativa HOM05D001093 ORTHO05D010605 3.3e-08 62.4 48 45.8
Nn3g17441 Nelumbo nucifera HOM05D001093 ORTHO05D000743 3.3e-08 62.4 48 43.8
TWI60G1066 Tripterygium wilfordii HOM05D001093 ORTHO05D000743 3.3e-08 62.4 55 41.8
vmacro16499 Vaccinium macrocarpon HOM05D001093 ORTHO05D000743 3.3e-08 62.4 47 44.7
Actinidia16122 Actinidia chinensis HOM05D001093 ORTHO05D000743 4.4e-08 62.0 123 30.1
Migut.I00329 Erythranthe guttata HOM05D001093 ORTHO05D000743 4.4e-08 62.0 59 47.5
Sed0000006 Sechium edule HOM05D000791 ORTHO05D001863 4.4e-08 62.0 69 33.3
Actinidia35035 Actinidia chinensis HOM05D001093 ORTHO05D000743 5.7e-08 61.6 53 43.4
arahy.Tifrunner.gnm1.ann1.7R0RVH Arachis hypogaea HOM05D001093 ORTHO05D000743 7.5e-08 61.2 51 45.1
Oeu047262.2 Olea europaea HOM05D001093 ORTHO05D000743 9.7e-08 60.8 45 42.2
Hund09906 Selenicereus undatus HOM05D009441 ORTHO05D010605 9.7e-08 60.8 71 38.0
MSTRG.4449 Avicennia marina HOM05D001093 ORTHO05D010605 1.3e-07 60.5 58 39.7
ECA247G2835 Erigeron canadensis HOM05D001093 ORTHO05D000743 1.3e-07 60.5 83 33.7
BraA02t09084Z Brassica rapa HOM05D009441 ORTHO05D010605 1.7e-07 60.1 118 30.5
Aqoxy3G03627 Aquilegia oxysepala HOM05D001093 ORTHO05D000743 3.7e-07 58.9 128 30.5
THA.LOC104798461 Tarenaya hassleriana HOM05D001093 ORTHO05D000743 3.7e-07 58.9 63 38.1
AagrBONN_evm.TU.Sc2ySwM_117.925 Anthoceros agrestis HOM05D001093 ORTHO05D000743 8.2e-07 57.8 50 40.0
CDE11G0673 Ceratophyllum demersum HOM05D001093 ORTHO05D000743 8.2e-07 57.8 103 32.0
FAN17G0179 Fragaria x ananassa HOM05D000009 ORTHO05D000008 8.2e-07 57.8 112 30.4
Phvul.009G191600 Phaseolus vulgaris HOM05D007909 ORTHO05D000743 8.2e-07 57.8 50 36.0
PSO801G0246 Papaver somniferum HOM05D001093 ORTHO05D000743 1.1e-06 57.4 112 31.2
Lalb_Chr05g0211191 Lupinus albus HOM05D001093 ORTHO05D000743 1.4e-06 57.0 107 29.0
PSO339G4557 Papaver somniferum HOM05D001093 ORTHO05D000743 1.4e-06 57.0 112 31.2
AUR62028209 Chenopodium quinoa HOM05D001093 ORTHO05D000743 1.8e-06 56.6 60 40.0
ClCG04G011830 Citrullus lanatus HOM05D000020 ORTHO05D000743 1.8e-06 56.6 45 46.7
BcaC09g51595 Brassica carinata HOM05D001093 ORTHO05D011195 2.4e-06 56.2 45 44.4
BolC1t01130H Brassica oleracea HOM05D020533 ORTHO05D011195 2.4e-06 56.2 45 44.4
BraA01t00935Z Brassica rapa HOM05D001093 ORTHO05D011195 2.4e-06 56.2 45 44.4
CsaV3_1G005950 Cucumis sativus L. HOM05D007909 ORTHO05D000743 2.4e-06 56.2 45 44.4
Migut.F00931 Erythranthe guttata HOM05D001093 ORTHO05D000743 2.4e-06 56.2 112 30.4
CARHR196520 Cardamine hirsuta HOM05D001093 ORTHO05D000743 3.1e-06 55.8 57 40.4
FvH4_4g13550 Fragaria vesca HOM05D008195 ORTHO05D010605 3.1e-06 55.8 106 31.1
Atru.chr9.429 Acer truncatum HOM05D007909 ORTHO05D000743 4.1e-06 55.5 111 29.7
Rhsim12G0151100 Rhododendron simsii HOM05D001093 ORTHO05D000743 4.1e-06 55.5 110 32.7
Solyc06g066140.3 Solanum lycopersicum HOM05D008195 ORTHO05D000743 4.1e-06 55.5 107 29.0
GSVIVG01024330001 Vitis vinifera HOM05D001093 ORTHO05D000743 4.1e-06 55.5 80 35.0
MSTRG.4 Avicennia marina HOM05D001093 ORTHO05D000743 5.3e-06 55.1 52 44.2
A01p09910 Brassica napus HOM05D001093 ORTHO05D011195 7.0e-06 54.7 45 42.2
CARHR076920 Cardamine hirsuta HOM05D001093 ORTHO05D000743 7.0e-06 54.7 47 46.8
Ciclev10033462m.g Citrus clementina HOM05D001093 ORTHO05D000743 7.0e-06 54.7 109 33.0
MELO3C002025.2 Cucumis melo HOM05D007909 ORTHO05D000743 7.0e-06 54.7 50 44.0
FAN07G2119 Fragaria x ananassa HOM05D008195 ORTHO05D010605 7.0e-06 54.7 84 33.3
QL03p074129 Quercus lobata HOM05D007909 ORTHO05D000743 7.0e-06 54.7 90 34.4
SGA_v2.0_scaffold59G20737 Striga asiatica HOM05D001093 ORTHO05D000743 7.0e-06 54.7 100 27.0
TWI60G0473 Tripterygium wilfordii HOM05D007909 ORTHO05D000743 7.0e-06 54.7 109 30.3
EL10Ac5g11122 Beta vulgaris HOM05D001093 ORTHO05D000743 9.1e-06 54.3 107 31.8


User provided reference genes

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